Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq8 156 8e-33 seq21 149 1e-30 seq5 141 2e-28 seq12 122 2e-22 >seq8 Length=1087023 Score = 156 bits (172), Expect = 8e-33 Identities = 163/214 (76%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||| |||| ||||| || ||||| ||||| || || || | || | || || Sbjct 676700 CAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGATAAGGTACGTCCGTC 676759 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||||| || || ||||| || || | |||||||||||| || ||||| ||||||||||| Sbjct 676760 TTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGAATTCCTTCCTTGTC 676819 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 |||||| |||| ||| || || || ||||| | ||||| || || | || ||||| Sbjct 676820 TTGAATTTTTGACTTAACATTGTCAATAGTGTCAGAGGATTCAACCTCGAGAGTAATGGT 676879 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||| || || | ||| |||||||| ||||||||| Sbjct 676880 TTTACCGGTCAAGGTTTTGACGAAGATCTGCATT 676913 >seq21 Length=453462 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || |||||||||| || ||||| ||||||||||| ||||| || | || | |||||| Sbjct 371735 AAAACCAAGTGTAAGGTAGACTCCTTTTGGATGTTGTAATCAGATAAAGTACGACCATCT 371676 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 |||| || || || || || || | | |||||| || || ||||| |||||||||||| Sbjct 371675 TCTAGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGGGGAATTCCTTCCTTGTCT 371616 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 || ||||||| || || ||||| || || ||||| || || | ||||||||| Sbjct 371615 TGGATCTTTGATTTAACATTATCGATTGTATCACTGGATTCGACCTCAAGAGTGATGGTT 371556 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||| || |||||||| || |||||||| Sbjct 371555 TTACCCGTTAGCGTCTTGACAAAAATCTGCAT 371524 >seq5 Length=1301127 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||| |||| || || || ||||||||||| ||||| || | || | ||||| Sbjct 1173660 CAAAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAATCAGATAAAGTACGTCCATC 1173719 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||||| ||||| || || || || | | ||||||||| || || || ||||||||||| Sbjct 1173720 TTCTAATTGCTTACCAGCAAAGATTAAACGTTGTTGGTCTGGAGGGATTCCTTCCTTGTC 1173779 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 || ||||||| ||| || || || || || | ||| ||||| || | ||| || || Sbjct 1173780 CTGGATCTTTGACTTAACATTGTCAATAGTATCGGATGACTCTACCTCGAGGGTAATAGT 1173839 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || ||||| ||||| || |||||||| Sbjct 1173840 CTTACCGGTAAGGGTTTTGACAAAAATCTGCAT 1173872 Score = 87.8 bits (96), Expect = 3e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287 ||||||||| || ||||| | | || ||||| || || || || ||||||||||| || Sbjct 1113197 TTAATTTCCACCACGAAGTCTGAGAACTAAGTGAAGAGTAGATTCCTTTTGGATGTTGTA 1113256 Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347 || || | ||| | ||||||||||| ||||| || || || || | | ||||||||| Sbjct 1113257 GTCAGATAATGTACGACCATCTTCTAATTGCTTACCAGCAAAAATCAAACGTTGTTGGTC 1113316 Query 68348 GGGTGG 68353 ||||| Sbjct 1113317 TGGTGG 1113322 >seq12 Length=712717 Score = 122 bits (134), Expect = 2e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||| |||| || || || ||||||||||| || || || | || | |||||||| Sbjct 150943 ACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAGTCAGATAAGGTACGGCCATCTTCC 151002 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || ||||| || || || || | | |||||| || || ||||| || ||||| |||||| Sbjct 151003 AATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATTCCCTCCTTATCTTGA 151062 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||||| ||||| || || ||||| | ||| || || || | || || || || Sbjct 151063 ATCTTTGATTTGACATTATCAATAGTGTCAGATGACTCAACCTCAAGAGTAATTGTCTTC 151122 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || ||||| || || || ||||||||| Sbjct 151123 CCTGTAAGGGTTTTAACAAAAATCTGCATT 151152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921620833241920