Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq5 123 6e-23 seq8 107 5e-18 >seq5 Length=1301127 Score = 123 bits (136), Expect = 6e-23 Identities = 145/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || || || | | || ||||| ||||||||||| || || || || Sbjct 1173681 TTCCTTTTGGATGTTGTAATCAGATAAAGTACGTCCATCTTCTAATTGCTTACCAGCAAA 1173740 Query 288342 GATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||| | ||| ||||| ||| ||||||||||| || |||||||| || | || || Sbjct 1173741 GATTAAACGTTGTTG---GTCTGGAGGGATTCCTTCCTTGTCCTGGATCTTTGACTTAAC 1173797 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || |||| |||| || ||||| ||||| || || ||||| ||||| || || || Sbjct 1173798 ATTGTCAATAGTATCGGATGACTCTACCTCGAGGGTAATAGTCTTACCGGTAAGGGTTTT 1173857 Query 288459 GACGAATATCTGCAT 288473 ||| || |||||||| Sbjct 1173858 GACAAAAATCTGCAT 1173872 >seq8 Length=1087023 Score = 107 bits (118), Expect = 5e-18 Identities = 142/196 (72%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| || || ||||| | | || |||||||||||||||||||| || || || Sbjct 676721 TTCCTTTTGAATGTTGTAGTCAGATAAGGTACGTCCGTCTTCTAATTGTTTACCGGCAAA 676780 Query 288342 GATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||| | | ||||| ||| || |||||||| || || || ||||| | || || Sbjct 676781 GATTAATCTTTGTTG---GTCTGGAGGAATTCCTTCCTTGTCTTGAATTTTTGACTTAAC 676837 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || |||| || ||||| || ||||| || || || || ||||||| || || Sbjct 676838 ATTGTCAATAGTGTCAGAGGATTCAACCTCGAGAGTAATGGTTTTACCGGTCAAGGTTTT 676897 Query 288459 GACGAATATCTGCATT 288474 |||||| ||||||||| Sbjct 676898 GACGAAGATCTGCATT 676913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179652344452208