Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq8 122 9e-23
seq12 96.9 3e-15
seq21 89.7 5e-13
seq5 84.2 2e-11
>seq8
Length=1087023
Score = 122 bits (134), Expect = 9e-23
Identities = 160/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285
||||| | || | ||| | || ||||| |||||||||||||| || | | ||| ||
Sbjct 676695 AATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGATAAGGTACGT 676754
Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345
||||||| | || || |||||| | || | | || ||||| ||||||||||||||
Sbjct 676755 CCGTCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGAATTCCTTCC 676814
Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405
|| ||||| |||||| ||| ||| || | || ||| || || || || | |||
Sbjct 676815 TTGTCTTGAATTTTTGACTTAACATTGTCAATAGTGTCAGAGGATTCAACCTCGAGAGTA 676874
Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTA 64447
| ||| || |||||||| ||||| ||||| || |||||| ||
Sbjct 676875 ATGGTTTTACCGGTCAAGGTTTTGACGAAGATCTGCATTGTA 676916
>seq12
Length=712717
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | |||||| || || | ||| | || ||||| ||||| |||||||| || |
Sbjct 150924 ACCACCTCTCAATCTGAGAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAGTCAGA 150983
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||| || | ||||| | ||||| || ||| |||| | || || || || |||||
Sbjct 150984 TAAGGTACGGCCATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGG 151043
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|||||| || || ||||| || ||| || ||| || | || ||| | || ||
Sbjct 151044 AATTCCCTCCTTATCTTGAATCTTTGATTTGACATTATCAATAGTGTCAGATGACTCAAC 151103
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| | ||| | ||||| || || | ||||| || ||||| ||||||||
Sbjct 151104 CTCAAGAGTAATTGTCTTCCCTGTAAGGGTTTTAACAAAAATCTGCATTTT 151154
>seq21
Length=453462
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || ||||| ||||||||||| | | || || | ||||| || || || ||
Sbjct 371720 GTAGACTCCTTTTGGATGTTGTAATCAGATAAAGTACGACCATCTTCTAGTTGTTTACCA 371661
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| |||| | || || || || || ||||||||||| || ||||| || ||| ||
Sbjct 371660 GCAAAAATTAAACGTTGTTGATCTGGGGGAATTCCTTCCTTGTCTTGGATCTTTGATTTA 371601
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | |||||||| || || || || | ||| | ||| || || || | ||
Sbjct 371600 ACATTATCGATTGTATCACTGGATTCGACCTCAAGAGTGATGGTTTTACCCGTTAGCGTC 371541
Query 64427 TTTACGAAAATTTGCAT 64443
|| || ||||| |||||
Sbjct 371540 TTGACAAAAATCTGCAT 371524
>seq5
Length=1301127
Score = 84.2 bits (92), Expect = 2e-11
Identities = 151/221 (68%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285
||||| | || | ||| | || ||||| ||||| ||||||||||| | | || ||
Sbjct 1173655 AATCTCAAAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAATCAGATAAAGTACGT 1173714
Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345
| ||||| | ||||| || ||| | || | || || ||||| ||||| ||||||||
Sbjct 1173715 CCATCTTCTAATTGCTTACCAGCAAAGATTAAACGTTGTTGGTCTGGAGGGATTCCTTCC 1173774
Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405
|| || || || ||| ||| ||| || | ||||| | || || || | ||
Sbjct 1173775 TTGTCCTGGATCTTTGACTTAACATTGTCAATAGTATCGGATGACTCTACCTCGAGGGTA 1173834
Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
| ||||| ||||| | ||||| || ||||| ||||| ||
Sbjct 1173835 ATAGTCTTACCGGTAAGGGTTTTGACAAAAATCTGCATCTT 1173875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499643950603840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |