Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq21 134 1e-26 seq5 127 1e-24 seq8 116 3e-21 seq9 82.4 5e-11 >seq21 Length=453462 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||||||||||| || || | |||||| || ||||| ||||||||||| Sbjct 371750 CCACCTCTTAATCTTAAAACCAAGTGTAAGGTAGACTCCTTTTGGATGTTGTAATCAGAT 371691 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | | | | ||||||| |||||| ||||| | || ||||| ||||| || ||| Sbjct 371690 AAAGTACGACCATCTTCTAGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGGGGA 371631 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| || || ||| ||| | || || ||||| || ||| || Sbjct 371630 ATTCCTTCCTTGTCTTGGATCTTTGATTTAACATTATCGATTGTATCACTGGATTCGACC 371571 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | || ||||||||||| || || || || |||||||| ||||| Sbjct 371570 TCAAGAGTGATGGTTTTACCCGTTAGCGTCTTGACAAAAATCTGCAT 371524 >seq5 Length=1301127 Score = 127 bits (140), Expect = 1e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||||| ||||| ||||| | || || || ||||| ||||||||||| Sbjct 1173646 CCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAATCAGAT 1173705 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | | | | ||||||||||| || ||||| | || ||||| |||||||| || Sbjct 1173706 AAAGTACGTCCATCTTCTAATTGCTTACCAGCAAAGATTAAACGTTGTTGGTCTGGAGGG 1173765 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| || || || ||| | || ||||||||| ||||| Sbjct 1173766 ATTCCTTCCTTGTCCTGGATCTTTGACTTAACATTGTCAATAGTATCGGATGACTCTACC 1173825 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || | |||||| || ||||| || || ||||| |||||||| ||||| || Sbjct 1173826 TCGAGGGTAATAGTCTTACCGGTAAGGGTTTTGACAAAAATCTGCATCTT 1173875 >seq8 Length=1087023 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008 ||||||| ||||| ||||| ||||| | || || || ||||| |||||||| || | | Sbjct 676686 CCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGAT 676745 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 || || |||||||||||||||| || || | || || | |||||||| || Sbjct 676746 AAGGTACGTC-CGTCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGG 676804 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 ||||||||||||||| |||||| || ||| | || ||||| || ||| || Sbjct 676805 AATTCCTTCCTTGTCTTGAATTTTTGACTTAACATTGTCAATAGTGTCAGAGGATTCAAC 676864 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | |||||||||||||| |||| ||||| || || || ||||| Sbjct 676865 CTCGAGAGTAATGGTTTTACCGGTCAAGGTTTTGACGAAGATCTGCAT 676912 >seq9 Length=949999 Score = 82.4 bits (90), Expect = 5e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 15067 GGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCT 15126 |||||||||||||| || ||||||| ||| || | || ||||||||| ||| Sbjct 831612 GGAATTCCTTCCTTATCCTGAATTTTGGATTTGACGTTGTCAATAGTATCGGATGATTCA 831671 Query 15127 ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || |||||||| || |||||||| || | ||||| || ||||||||||| Sbjct 831672 ACTTCTAAGGTGATAGTTTTACCGGTTAACGTTTTGACGAAAATTTGCAT 831721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391407622760