Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq12 113 4e-20 seq5 96.9 3e-15 seq8 95.1 1e-14 >seq12 Length=712717 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 45144 GTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCT 45203 ||||||||||||||||| || || || | ||| ||| |||||||| || || Sbjct 150955 GTTGATTCCTTTTGGATGTTGTAGTCAGATAAGGTACGGCCATCTTCCAATTGCTTACCA 151014 Query 45204 GCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTG 45263 || | ||||| ||||| || || || ||||| || || ||||||||||| ||| |||| Sbjct 151015 GCAAAAATCAAACGTTGTTGATCTGGAGGAATTCCCTCCTTATCTTGAATCTTTGATTTG 151074 Query 45264 ATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTT 45323 | || | ||||| || ||||| || || ||||||| || || || || || ||| Sbjct 151075 ACATTATCAATAGTGTCAGATGACTCAACCTCAAGAGTAATTGTCTTCCCTGTAAGGGTT 151134 Query 45324 TTTACAAAAATTTGCAT 45340 || |||||||| ||||| Sbjct 151135 TTAACAAAAATCTGCAT 151151 >seq5 Length=1301127 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | ||| | ||||||||||||||||| || ||||| | || | Sbjct 1173658 CTCAAAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAATCAGATAAAGTACGTCCA 1173717 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || ||||| || || || | || || ||||| ||||| || || || ||||| || Sbjct 1173718 TCTTCTAATTGCTTACCAGCAAAGATTAAACGTTGTTGGTCTGGAGGGATTCCTTCCTTG 1173777 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 || || || ||| || | || | || ||||| ||||| || ||||| |||| Sbjct 1173778 TCCTGGATCTTTGACTTAACATTGTCAATAGTATCGGATGACTCTACCTCGAGGGTAATA 1173837 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || ||||| || ||||| |||||||| |||||| Sbjct 1173838 GTCTTACCGGTAAGGGTTTTGACAAAAATCTGCATC 1173873 >seq8 Length=1087023 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | ||| | || ||||||||||| || || || || | ||| Sbjct 676698 CTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGATAAGGTACGTCCG 676757 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || |||||||| || || | || |||| ||| ||||| || ||||| ||||| || Sbjct 676758 TCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGAATTCCTTCCTTG 676817 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||||||||||| || | || | ||||| || || || || |||||||||| Sbjct 676818 TCTTGAATTTTTGACTTAACATTGTCAATAGTGTCAGAGGATTCAACCTCGAGAGTAATG 676877 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| ||||| | ||||| || || || ||||| Sbjct 676878 GTTTTACCGGTCAAGGTTTTGACGAAGATCTGCAT 676912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002431594560