Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq1 125 9e-24
seq14 84.2 3e-11
>seq1
Length=2214157
Score = 125 bits (138), Expect = 9e-24
Identities = 350/534 (66%), Gaps = 6/534 (1%)
Strand=Plus/Plus
Query 116064 CCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGG 116123
||| | |||| | || | |||||||| || | ||| ||||| ||| | || ||||||||
Sbjct 31272 CCATAAATCATATTGTAAAATACCTTGAGATGTTGGTGATCCTTCATAAGTTTCATATGG 31331
Query 116124 GCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAA 116183
|| | | || ||||| | || || | || || ||||| || || |||||
Sbjct 31332 TCCTAATTCTTTTGCTAATTCACATGATGCTTCAACAGCAGCATGATAAATAGTTTCAAA 31391
Query 116184 AATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAA 116243
|| || || | | || || || |||||||| | | ||| | |||||
Sbjct 31392 TATTTGAATGTTTAATAATTTAGCTTCAGGTGAATCAAATGGTAAACGAAGACACATAAA 31451
Query 116244 TACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCG 116303
|||| || | |||||| ||||| | ||||||| | |||||||||||| || ||||
Sbjct 31452 AGCATCAGCTAAACCTTGAACACCTAAAGCAATTGGTCTATGTCTCATATTTGAATTTCT 31511
Query 116304 AGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAAC 116363
|| || |||||| |||||||||| |||| |||||| ||| |||||
Sbjct 31512 TGCTTCAATAACTGGATAATAATTCCTATCAATAATTTTATTTAAATTACGAACAACAAC 31571
Query 116364 CTTTGTGATTTCATGAAGCTTTTCGTAATCA-AAACTGCGA--GTCTCTTC---ATTGAC 116417
||||| || |||||||| |||| ||| | ||| || | | ||||| || |
Sbjct 31572 TTTTGTAATATCATGAAGTTTTTGAAAATTATAAATTGAAACGTTATCTTCAATATCAAT 31631
Query 116418 ATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTA 116477
| | | || | || | ||| || | ||| || |||| ||||| ||| ||
Sbjct 31632 AAATGTTGGTAATGCTAATGATGCTAAATTGCAAACAGCAACTTCATCGGGTGCAGAATA 31691
Query 116478 CTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGA 116537
|| | |||||| ||| ||||||||||| || || || || | || ||||||||
Sbjct 31692 TTCAACAATTTCACAACATAAATTTGAACTTTTTATTGTACCAAGATTTTTTTGATTACT 31751
Query 116538 CTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTG 116591
||| | ||||| ||||| || || |||||| |||| | || || || |||||
Sbjct 31752 TTTTTTATTACATGCATCTTTATAAAGCATAAATGGAATACCAGTTTCTGTTTG 31805
>seq14
Length=670130
Score = 84.2 bits (92), Expect = 3e-11
Identities = 114/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578
|||||| || ||| ||||| || ||||| |||| | |||||| || || || ||
Sbjct 578303 AGCAAAATCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTAGAAAAAGTAAGGCC 578244
Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638
|||||| | ||| | ||| || ||||||||||| | || || |||||||| || ||
Sbjct 578243 TGGCATTAAACCTCTCTTTTTTAACCAGAAAATAGATGCGAAAGAACCAGAGAAAAAAAT 578184
Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAA 127677
|| || ||| ||||| |||| ||||| || |||||
Sbjct 578183 ACCTTCAACAGCAGCGAAAGCAACAAGACGTTCAGCAAA 578145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506157037760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |