Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq8 102 6e-17 seq22 96.9 2e-15 seq21 84.2 2e-11 >seq8 Length=1087023 Score = 102 bits (112), Expect = 6e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| || | || |||||||| |||||| ||| ||||| || || || || | Sbjct 676686 CCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGAT 676745 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 || ||| | || || |||||||| ||| |||| ||||| | || || || | || Sbjct 676746 AAGGTACGTCCGTCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGA 676805 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAA--TCGTCGCTACTGTGTCTGCGCTTTCCA 39670 | ||||| ||||| |||||| |||| | ||| || ||||| | | ||| | Sbjct 676806 ATTCCTTCCTTGTCTTGAATTTTTGACTTAACATTGTCAATA--GTGTCAGAGGATTCAA 676863 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | || | |||||| |||||||| || || ||||| |||||||||||||| Sbjct 676864 CCTCGAGAGTAATGGTTTTACCGGTCAAGGTTTTGACGAAGATCTGCAT 676912 >seq22 Length=409488 Score = 96.9 bits (106), Expect = 2e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 42515 TTACCTAAATCACCAAGATGTCGTTCTTCATCATGCGGTCCGCCGTGTTCTTTATGAAAA 42574 |||||||||||||||| ||| || ||||||| | || | ||||| || | ||| Sbjct 19070 TTACCTAAATCACCAACATGACGGACTTCATCTTCTGGAGCACCGTGGGTTTGTTTGAAA 19129 Query 42575 GGATTAAAATGTTCACCAGCCGATGTACATCCATTGGTGGTATCTCCAAATTCATGTATA 42634 || |||||||| |||||| || |||||||||||||| | || ||||||||||| ||| Sbjct 19130 GGGTTAAAATGAGGACCAGCAGAGGTACATCCATTGGTATTGTCACCAAATTCATGAATA 19189 Query 42635 TGAAAACC 42642 || || || Sbjct 19190 TGGAATCC 19197 >seq21 Length=453462 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 39511 ACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCC 39570 ||||| || || || || ||||| || || ||||| | ||| || |||| || Sbjct 371732 ACCAAGTGTAAGGTAGACTCCTTTTGGATGTTGTAATCAGATAAAGTACGACCATCTTCT 371673 Query 39571 AATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCAT 39630 | |||||| || ||||||||||||| || ||||| | ||| | ||||| ||||| Sbjct 371672 AGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGGGGAATTCCTTCCTTGTCTTGG 371613 Query 39631 ATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTA 39690 || ||| ||||| | | | ||| || | ||| || || | ||| || |||||| Sbjct 371612 ATCTTTGATTTAACATTATCGATTGTATCACTGGATTCGACCTCAAGAGTGATGGTTTTA 371553 Query 39691 CCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||||||| || || || || |||||||| Sbjct 371552 CCCGTTAGCGTCTTGACAAAAATCTGCAT 371524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347369024234888