Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq8 102 6e-17
seq22 96.9 2e-15
seq21 84.2 2e-11
>seq8
Length=1087023
Score = 102 bits (112), Expect = 6e-17
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| |||| || | || |||||||| |||||| ||| ||||| || || || || |
Sbjct 676686 CCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGAT 676745
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
|| ||| | || || |||||||| ||| |||| ||||| | || || || | ||
Sbjct 676746 AAGGTACGTCCGTCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGA 676805
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAA--TCGTCGCTACTGTGTCTGCGCTTTCCA 39670
| ||||| ||||| |||||| |||| | ||| || ||||| | | ||| |
Sbjct 676806 ATTCCTTCCTTGTCTTGAATTTTTGACTTAACATTGTCAATA--GTGTCAGAGGATTCAA 676863
Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
| || | |||||| |||||||| || || ||||| ||||||||||||||
Sbjct 676864 CCTCGAGAGTAATGGTTTTACCGGTCAAGGTTTTGACGAAGATCTGCAT 676912
>seq22
Length=409488
Score = 96.9 bits (106), Expect = 2e-15
Identities = 98/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 42515 TTACCTAAATCACCAAGATGTCGTTCTTCATCATGCGGTCCGCCGTGTTCTTTATGAAAA 42574
|||||||||||||||| ||| || ||||||| | || | ||||| || | |||
Sbjct 19070 TTACCTAAATCACCAACATGACGGACTTCATCTTCTGGAGCACCGTGGGTTTGTTTGAAA 19129
Query 42575 GGATTAAAATGTTCACCAGCCGATGTACATCCATTGGTGGTATCTCCAAATTCATGTATA 42634
|| |||||||| |||||| || |||||||||||||| | || ||||||||||| |||
Sbjct 19130 GGGTTAAAATGAGGACCAGCAGAGGTACATCCATTGGTATTGTCACCAAATTCATGAATA 19189
Query 42635 TGAAAACC 42642
|| || ||
Sbjct 19190 TGGAATCC 19197
>seq21
Length=453462
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 39511 ACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCC 39570
||||| || || || || ||||| || || ||||| | ||| || |||| ||
Sbjct 371732 ACCAAGTGTAAGGTAGACTCCTTTTGGATGTTGTAATCAGATAAAGTACGACCATCTTCT 371673
Query 39571 AATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCAT 39630
| |||||| || ||||||||||||| || ||||| | ||| | ||||| |||||
Sbjct 371672 AGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGGGGAATTCCTTCCTTGTCTTGG 371613
Query 39631 ATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTA 39690
|| ||| ||||| | | | ||| || | ||| || || | ||| || ||||||
Sbjct 371612 ATCTTTGATTTAACATTATCGATTGTATCACTGGATTCGACCTCAAGAGTGATGGTTTTA 371553
Query 39691 CCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
||||||| || || || || ||||||||
Sbjct 371552 CCCGTTAGCGTCTTGACAAAAATCTGCAT 371524
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347369024234888
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |