Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq21 91.5 1e-13 seq12 91.5 1e-13 seq8 91.5 1e-13 >seq21 Length=453462 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 38238 aaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAG 38297 ||| | ||||| || || || || ||||| ||||| ||||||||||| | || ||||| Sbjct 371518 AAATAGATGCAGATTTTTGTCAAGACGCTAACGGGTAAAACCATCACTCTTGAGGTCGAA 371577 Query 38298 GCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC 38357 ||| || | | | | ||||| ||| |||| ||||| || ||||||||| | Sbjct 371578 TCCAGTGATACAATCGATAATGTTAAATCAAAGATCCAAGACAAGGAAGGAATTCCCCCA 371637 Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417 || ||||| || | |||| || || ||||| || || || | || || | || Sbjct 371638 GATCAACAACGTTTAATTTTTGCTGGTAAACAACTAGAAGATGGTCGTACTTTATCTGAT 371697 Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||||||| | || | || ||||| | | || ||||| || Sbjct 371698 TACAACATCCAAAAGGAGTCTACCTTACACTTGGTTTTAAGATTAAGAGGTGG 371750 >seq12 Length=712717 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 38238 aaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAG 38297 ||||||||||| || || || ||||| || || || || || || || | || || ||| Sbjct 151157 AAAAAAATGCAGATTTTTGTTAAAACCCTTACAGGGAAGACAATTACTCTTGAGGTTGAG 151098 Query 38298 GCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC 38357 | | |||| | | | | ||| ||| || | || || ||||||||||| | Sbjct 151097 TCATCTGACACTATTGATAATGTCAAATCAAAGATTCAAGATAAGGAGGGAATTCCTCCA 151038 Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417 || ||||| || | |||| || || || || |||| || | || ||| | ||| Sbjct 151037 GATCAACAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGATGGCCGTACCTTATCTGAC 150978 Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||||||||||| | || | |||||||| || | |||||||| || Sbjct 150977 TACAACATCCAAAAGGAATCAACTTTACATTTGGTTCTCAGATTGAGAGGTGG 150925 >seq8 Length=1087023 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38243 aaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| ||||| | || || |||||||| || |||| || || || | Sbjct 676913 AATGCAGATCTTCGTCAAAACCTTGACCGGTAAAACCATTACTCTCGAGGTTGAATCCTC 676854 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| |||||| | ||||| || |||||||| | ||||| Sbjct 676853 TGACACTATTGACAATGTTAAGTCAAAAATTCAAGACAAGGAAGGAATTCCTCCAGACCA 676794 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | | || | || || ||||| | || |||| || ||| | |||||||| Sbjct 676793 ACAAAGATTAATCTTTGCCGGTAAACAATTAGAAGACGGACGTACCTTATCTGACTACAA 676734 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| ||||||||| | || | |||||||| || | || ||||| || Sbjct 676733 CATTCAAAAGGAATCCACTTTACATTTGGTTTTGAGATTAAGAGGTGG 676686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171949706240