Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1 190 3e-43 seq14 102 1e-16 >seq1 Length=2214157 Score = 190 bits (210), Expect = 3e-43 Identities = 822/1287 (64%), Gaps = 27/1287 (2%) Strand=Plus/Minus Query 111729 TTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAG 111788 || || |||||||| || ||| |||||||| |||||| |||||||| | || || Sbjct 32378 TTTAATGCTGGTACTCCTCAACCACAAATGTCTTCTTGTTTTCTTATTGCTATGAAAGAA 32319 Query 111789 GATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCT 111848 |||||||| | || ||||| | ||| | | ||||| ||| ||||| | ||| Sbjct 32318 GATTCAATTGAAGGTATTTATGATACTTTAAAAACTTGTGCTTTAATTTCAAAATCAGCT 32259 Query 111849 GGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACA 111908 || || || || | || || ||| || | ||| | ||| |||| ||||||| Sbjct 32258 GGAGGAATTGGTCTTCATATTCATAATATTAGAAGTACTGGTTCTTATATTGCAGGTACA 32199 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 |||||| ||| ||||||||||||||||| | || || |||||| || || | ||| Sbjct 32198 AATGGTACATCTAATGGTATTATTCCAATGTTACGTGTTTTTAACAATACTGCAAGATAT 32139 Query 111969 GTAAACCAAGCTGGGCGTCGCAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCA 112024 || | |||| ||| | ||| || || | ||| | ||| | || |||||||| Sbjct 32138 GTTGATCAAGGTGGTAAT-AAAAGACCTGGTGCTTTTGCAATGTATTTGGAACCATGGCA 32080 Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTG 112084 || ||| | | || | |||| | | || || ||| | || || | Sbjct 32079 TGCTGATGTTTTTGATTATATTGATATTAGAAAAAATCATGGTAAAGAAGAAATTAGAGC 32020 Query 112085 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 112144 | ||| | || | || | |||||| | ||| | || |||| |||||||| | | Sbjct 32019 AAGAGATTTATTTGCAGCATTATGGATTTCTGATTTATTTATGAGAAGAGTTGAACAAAA 31960 Query 112145 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGA 112204 ||| | ||||| | |||| ||| | | | || ||||| || |||| ||||| Sbjct 31959 TGGTCAATGGTCATTATTTTCCCCAAATGAAGTCCCTGGTCTTTCAGATGTTTATGGTGA 31900 Query 112205 GGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCC 112264 || |||||||| | || ||| || || ||||| || || | || | Sbjct 31899 TGAATTTGAAGCATTATATGAAAAATATGAAAAAGAAGGTAAAGCTGTTAAAACAATTAA 31840 Query 112265 AGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATAT 112324 |||| | | ||| | | ||| | | | ||||| || ||||||| |||| ||| Sbjct 31839 AGCTCAAAAACTTTGGTATTCAATTTTGGAAGCACAAACAGAAACTGGTATTCCATTTAT 31780 Query 112325 GCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAG 112384 |||||| ||||| || ||||| |||| ||||||||||| ||| | ||| || || || Sbjct 31779 GCTTTATAAAGATGCATGTAATAAAAAAAGTAATCAAAAAAATCTTGGTACAATAAAAAG 31720 Query 112385 TTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAA 112444 ||| || | ||| ||||| | |||| | | | ||||| ||||| || || Sbjct 31719 TTCAAATTTATGTTGTGAAATTGTTGAATATTCTGCACCCGATGAAGTTGCTGTTTGCAA 31660 Query 112445 CCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAG-AGACAAAG-----ACATTTGA 112498 | |||||| | || | || | | | | ||| | ||| || | | | | | Sbjct 31659 TTTAGCATCATTAGCATTACCAACATTTATTGATATTGAAGATAACGTTTCAATTTATAA 31600 Query 112499 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGA 112558 || | ||||||| || || |||| ||| ||| || |||| | | ||||||| Sbjct 31599 TTTTCAAAAACTTCATGATATTACAAAAGTTGTTGTTCGTAATTTAAATAAAATTATTGA 31540 Query 112559 TAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGG 112618 ||| |||| ||| || ||| || | || || ||||||||||| | ||||||| Sbjct 31539 TAGGAATTATTATCCAGTTATTGAAGCAAGAAATTCAAATATGAGACATAGACCAATTGC 31480 Query 112619 TCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTTGATTC 112675 | | ||||| |||||| | || |||| || || |||| || | |||||||||| Sbjct 31479 TTTAGGTGTTCAAGGTTTAGCTGATGCTTTTATGTGTCTTCGTTTAC---CATTTGATTC 31423 Query 112676 CGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA 112735 ||||| || | | || | |||||||| || || ||||| || ||| |||| Sbjct 31422 ACCTGAAGCTAAATTATTAAACATTCAAATATTTGAAACTATTTATCATGCTGCTGTTGA 31363 Query 112736 GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 112795 || | || || ||| | | || ||||||||||| | ||| || || ||| | Sbjct 31362 AGCATCATGTGAATTAGCAAAAGAATTAGGACCATATGAAACTTATGAAGGATCACCAAC 31303 Query 112796 TTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCAC--TACGAC 112853 || ||||| | | |||| |||| | | |||| || ||||| || || | || Sbjct 31302 ATCTCAAGGTATTTTACAATATGATTTAT-GGAATGTTCAACCAA-CTGAACTTTGGGAT 31245 Query 112854 TGGGACGCTCTCAAGGAACGCA--TCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGG 112911 ||||| | || || | |||| | | ||| | | || ||| | | | Sbjct 31244 TGGGATTTATTGAAACAAAAAATGTCAA--AATATGGTTTAAGAAATTCACTTCTTGTTG 31187 Query 112912 CACCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAATGCTTTGAACCC 112970 |||||||||||||||| || || |||||| |||||| | ||||||||| |||||||| Sbjct 31186 CACCAATGCCAACAGCATCAACATCACAAATTCTTGGAT-TTAATGAATGTTTTGAACCA 31128 Query 112971 TACACGACGAACATCTATCTGAGAAGA 112997 || || | || || ||| |||||| Sbjct 31127 TATACTTCAAATATTTATAGTAGAAGA 31101 >seq14 Length=670130 Score = 102 bits (112), Expect = 1e-16 Identities = 552/866 (64%), Gaps = 25/866 (3%) Strand=Plus/Plus Query 101760 TTCCCCCTGAAGTATCCAC-ACCTCTGGGAACTCTATAAGAAGGCTCAAATGAGTAATTG 101818 ||||| | |||| ||||| | ||||| || | ||||| |||||| || | || Sbjct 577728 TTCCCAATTAAGT-TCCACGAGATCTGGCAAATGTATAAAAAGGCTGAAGCATCTTTCTG 577786 Query 101819 GACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACT---CTAAATGA 101875 |||||||||||| | ||| | || ||| | | |||||| | | | || ||| | Sbjct 577787 GACTGCTGAAGAAATTGATTTAAGTAAAGATATTGGTGATTGGGAAAATAAGCTTAATAA 577846 Query 101876 AAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATTGT 101935 | |||| || || | | || | || || || |||| || ||||| ||||| Sbjct 577847 AGATGAGCGTTTTTTTATTTCACGCGTCTTAGCCTTTTTCGCTGCTTCAGATGGTATTGT 577906 Query 101936 TTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCAATCCTCTGAAGCGAGATCTTT 101995 | || ||| | | | |||||| | | |||||| ||| | | ||||| | | || Sbjct 577907 TAACGAAAATTTAGTTGAAAACTTTTCGGCTGAGGTTCAAACACCAGAAGCTAAGTGCTT 577966 Query 101996 CTATGCGTATCAATGTCATAATG-AAATGGTGCATGGGGAGACATA--CAGTAAACTCAT 102052 |||| || || | |||| ||| ||| | || |||||||| || || | || Sbjct 577967 TTATG-GTTTCCAAATCATGATGGAAAATATACACTCTGAGACATATTCACTAT--TAAT 578023 Query 102053 AGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGT 102112 |||| |||||||| ||| | ||| | | || | || || ||| || Sbjct 578024 TGACACATATATTAAAGATTCTAAAGAGCGTGAATTTTTATTCAATGCTATTGAAAATGT 578083 Query 102113 TCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCGTT 102171 ||| |||||| | ||||| || ||||||||| | | ||| || | | || | || || Sbjct 578084 TCCTTGTATTAAGAAGAAGGCAGATTGGGCTTTAAGATGGATTAGTGATAAGGAAGCATT 578143 Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 |||||||| || || | || || || |||||| ||||| || ||||||||||| | Sbjct 578144 A-TTTGCTGAACGTCTTGTTGCTTTCGCTGCTGTTGAAGGTATTTTTTTCTCTGGTTCTT 578202 Query 102232 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 102291 || |||||| ||| | || ||| ||||| | |||||||| || || || || | Sbjct 578203 TCGCATCTATTTTCTGGTTAAAAAAGAGAGGTTTAATGCCAGGCCTTACTTTTTCTAATG 578262 Query 102292 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC--GGTGGAACTTTTCAAATT 102349 | | |||| |||||| || || || ||| || ||||| | | ||||| || Sbjct 578263 AATTGATCTGTCGTGATGAAGGTCTTCACACTGATTTTGCTTGCTTATTATTTTCCCAT- 578321 Query 102350 ATTGCGTATTAAACCAACGA--CTGAGACTATTCATTCTATTGTTAAGGAAGCCGTTGAG 102407 ||| | || ||| ||| | | | || | || ||| || || || Sbjct 578322 -TTGGAAAATAGACC--CGATCCAATTATTGTTGAAAAGATAATTACAGAGGCTGTAACT 578378 Query 102408 ATTGAGAAGGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTGAA 102467 |||||||||| || | | ||||| |||||| | | | | |||||||||| | Sbjct 578379 ATTGAGAAGGAATACTTTACAGATGCTCTTCCAGCCTCATTACTTGGTATGAATTGCAAT 578438 Query 102468 AAGATGTCCGAATATATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGGGGTGCCT 102527 ||||| ||||| |||| ||||| | ||| | | || || | || ||| | Sbjct 578439 TTGATGTGTCAATATGTTGAATATGTTGCCGATCG--TCTTTTAGTTGCTCTAGGTAACA 578496 Query 102528 CCA--ATTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGA 102585 | |||| || | ||||||||||||||||||||||| ||| | | || | Sbjct 578497 AGAAGATTTACAATGTTACTAATCCATTTGACTTCATGGAGAATATTTCATTAGCTGGTA 578556 Query 102586 AGACAAACTTCTTCGAAAAGAGGGTT 102611 |||||||||| ||||| ||||| ||| Sbjct 578557 AGACAAACTTTTTCGAGAAGAGAGTT 578582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741344737920