Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1 100 3e-16 >seq1 Length=2214157 Score = 100 bits (110), Expect = 3e-16 Identities = 297/450 (66%), Gaps = 6/450 (1%) Strand=Plus/Plus Query 110775 AACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACC 110834 |||||| | ||| || || || || | | ||| |||||||| |||| ||| ||| Sbjct 32136 AACATATCTTGCAGTATTGTTAAAAACACGTAACATTGGAATAATACCATTAGATGTACC 32195 Query 110835 ATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACC 110894 ||||||||| ||| || | | | ||| | || ||||| | |||||| || Sbjct 32196 ATTTGTACCTGCAATATAAGAACCAGTACTTCTAATATTATGAATATGAAGACCAATTCC 32255 Query 110895 ACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGA 110954 || || | || |||| ||||| | | | ||| |||||||||| ||||| || Sbjct 32256 TCCAGCTGATTTTGAAATTAAAGCACAAGTTTTTAAAGTATCATAAATACCTTCAATTGA 32315 Query 110955 ATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATT 111014 |||| | || | ||||| ||||| ||||||||||| || || |||| || || ||||| Sbjct 32316 ATCTTCTTTCATAGCAATAAGAAAACAAGAAGACATTTGTGGTTGAGGAGTACCAGCATT 32375 Query 111015 GAAGAGTGTAGGTGTCGCATGAATGAACAGACCTT-GGGACATCTTGTTGTATGTGTCGA 111073 || | || || | |||||| |||| | | || ||||| || || || || | Sbjct 32376 AAATAAAGTGGGAGAAGCATGAGTGAA-ATATTTTAATGACATTAAATTATAGGTTTCAA 32434 Query 111074 GTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAG 111133 | | ||| | ||| |||||||||| ||||||| ||| | | || ||| | Sbjct 32435 TGACTTTTTCAATATCATCACCATGAATACCAACAGCAACTCTCATAATTAAATGTTGTG 32494 Query 111134 GCGTTTCGATTAGCTTT-CCATCAACACGCTGAAGGTA-ACTCTTCTCTAGGGTCTTGAG 111191 | |||| | | |||| ||||||| | |||||| |||| || || || || | Sbjct 32495 GTCTTTC-AGCAACTTTACCATCAAGTCTTAAAAGGTATGATCTT-TCAAGAGTTTTAAA 32552 Query 111192 ACCAAAGTATCCAAAATCGAAATCACGATC 111221 ||||||| | | | | |||||||||||| Sbjct 32553 ACCAAAGAAATTATATTGGAAATCACGATC 32582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974998740800