Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1 262 5e-65 seq14 104 3e-17 >seq1 Length=2214157 Score = 262 bits (290), Expect = 5e-65 Identities = 956/1474 (65%), Gaps = 33/1474 (2%) Strand=Plus/Plus Query 105925 TCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGA-TTT 105983 |||||| ||| || || | || || |||||||| ||||||||| | |||||| ||| Sbjct 31101 TCTTCTACTATAAATATTTGAAGTATATGGTTCAAAACATTCATTAA-ATCCAAGAATTT 31159 Query 105984 GTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCT 106043 ||| || || ||||||||||||||||| | | ||| || | | ||| | || | Sbjct 31160 GTGATGTTGATGCTGTTGGCATTGGTGCAACAAGAAGTGAATTTCTTAAACCATATT--T 31217 Query 106044 TGA--TGCGTTCCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCAC 106099 ||| | || || | | |||||| || | ||| || |||||| || |||| | Sbjct 31218 TGACATTTTTTGTTTCAATAAATCCCAATCCCAAAGTTCAG-TTGGTTGAACATTCC-AT 31275 Query 106100 ATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCT 106159 | |||| |||| | | ||||| || || || || || ||| | || ||||| | ||| Sbjct 31276 AAATCATATTGTAAAATACCTTGAGATGTTGGTGATCCTTCATAAGTTTCATATGGTCCT 31335 Query 106160 TGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATA 106219 ||| || |||||||| || || | | || ||||| || |||||||| || Sbjct 31336 AATTCTTTTGCTAATTCACATGATGCTTCAACAGCAGCATGATAAATAGTTTCAAATATT 31395 Query 106220 CGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACA-AAATAAATAC 106278 || || | || |||||| ||||||||||| ||| | | | | ||||| | Sbjct 31396 TGAATGTTTAATAATTTAGCTTCAGGTGAATCAAATG-GTAAACGAAGACACATAAAAGC 31454 Query 106279 ATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGC 106338 ||| || | |||||||||||| ||| |||| ||||| |||| |||||| || |||| || Sbjct 31455 ATCAGCTAAACCTTGAACACCTAAAGCAATTGGTCTATGTCTCATATTTGAATTTCTTGC 31514 Query 106339 AGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTT 106398 ||| |||||| |||| || ||||| | | |||| ||| ||||| || Sbjct 31515 TTCAATAACTGGATAATAATTCCTATCAATAATTTTATTTAAATTACGAACAACAACTTT 31574 Query 106399 TGTGATTTCATGAAGTTTTTCATAATCA-AAAGTGCGA--GTCTCTTC---ATTGACATA 106452 ||| || ||||||||||||| | ||| | ||| || | | ||||| || | | | Sbjct 31575 TGTAATATCATGAAGTTTTTGAAAATTATAAATTGAAACGTTATCTTCAATATCAATAAA 31634 Query 106453 CTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTC 106512 |||| | || | |||||| |||||||||||||| ||||| | | || || Sbjct 31635 TGTTGGTAATGCTAATGATGCTAAATTGCAAACAGCAACTTCATCGGGTGCAGAATATTC 31694 Query 106513 TAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTT 106572 | |||||| ||| || || ||||| || || || || | ||| ||||| ||||| || Sbjct 31695 AACAATTTCACAACATAAATTTGAACTTTTTATTGTACCAAGATTTTTTTGATTACTTTT 31754 Query 106573 TTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAG 106632 ||| || || ||||| || || ||||| | || | || || || || |||| | | Sbjct 31755 TTTATTACATGCATCTTTATAAAGCATAAATGGAATACCAGTTTCTGTTTGTGCTTCCAA 31814 Query 106633 AATTGCCTTCCACACATCGGCGGCTGGTACAATGGCGTT---GGCCCGTCCCTCCGCCTC 106689 ||||| | ||| | | || | ||| | || || || || || Sbjct 31815 AATTGAATACCAAAGTTTTTGAGC---TTTAATTGTTTTAACAGCTTTACCTTCTTTTTC 31871 Query 106690 GTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT 106749 || ||| || | |||||||| || ||||| | || || ||||| || | | Sbjct 31872 ATATTTTTCATATAATGCTTCAAATTCATCACCATAAACATCTGAAAGACCAGGGACTTC 31931 Query 106750 GTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGG 106809 | ||| | || | |||||||||||| | ||||| | |||| || | || | Sbjct 31932 ATTTGGGGAAAATAATGACCATTGACCATTTTGTTCAACTCTTCTCATAAATAAATCAGA 31991 Query 106810 AATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCG 106869 |||||| | | || ||| | |||||| | | ||||| | ||| || || || Sbjct 31992 AATCCATAATGCTGCAAATAAATCTCTTGCTCTAATTTCTTCTTTACCATGATTTTTTCT 32051 Query 106870 TAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC 106929 | |||| | || | | ||| || |||||||| || | ||| | ||| | || || Sbjct 32052 AATATCAATATAATCAAAAACATCAGCATGCCATGGTTCCAAATACATTGCAAAAGCACC 32111 Query 106930 ----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 106985 |||| | ||| |||||| ||||| | || || |||||| || || | || Sbjct 32112 AGGTCTTT-TATTACCACCTTGATCAACATATCTTGCAGTATTGTTAAAAACACGTAACA 32170 Query 106986 TTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCA 107045 ||||||||||||||| ||| ||||||||| || |||| ||| | | ||| | Sbjct 32171 TTGGAATAATACCATTAGATGTACCATTTGTACCTGCAATATAAGAACCAGTACTTCTAA 32230 Query 107046 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 107105 || ||| || || | ||||| || ||||| | ||||| ||| ||||| | | Sbjct 32231 TATTATGAATATGAAGACCAATTCCTCCAGCTGATTTTGAAATTAAAGCACAAGTTTTTA 32290 Query 107106 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 107165 ||| |||| ||||| | ||||| || || || | || ||||| || ||| |||| Sbjct 32291 AAGTATCATAAATACCTTCAATTGAATCTTCTTTCATAGCAATAAGAAAACAAGAAGACA 32350 Query 107166 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT 107225 | || ||| || ||||||||||| || | || || | || ||| |||| ||| || Sbjct 32351 TTTGTGGTTGAGGAGTACCAGCATTAAATAAAGTGGGAGAAGCATGAGTGAA-ATATTTT 32409 Query 107226 -GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATG 107284 ||||| | || || || | ||| ||||| || || || || || || | Sbjct 32410 AATGACATTAAATTATAGGTTTCAATGACTTTTTCAATATCATCACCATGAATACCAACA 32469 Query 107285 GCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGA 107344 || || | ||||| | | ||| ||| |||| | | ||||| || | | ||| Sbjct 32470 GCAACTCTCATAATTAAATGTTGTGGTCTTTCAGCAACTTTACCATCAAGTCTTAAAAGG 32529 Query 107345 TA-GCTCTTCTCAAGGGTTTTGAGACCAAAGTAA 107377 || | |||| ||||| ||||| | ||||||| || Sbjct 32530 TATGATCTT-TCAAGAGTTTTAAAACCAAAGAAA 32562 >seq14 Length=670130 Score = 104 bits (114), Expect = 3e-17 Identities = 382/584 (65%), Gaps = 17/584 (3%) Strand=Plus/Minus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| ||||| ||||| || | || | |||||| || || |||||| Sbjct 578302 GCAAAATCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTAGAAAAAGTAAGGCCT 578243 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393 ||||| | ||| | ||| || ||||| |||||| ||| || || ||||| || ||| Sbjct 578242 GGCATTAAACCTCTCTTTTTTAACCAGAAAATAGATGCGAAAGAACCAGAGAAAAAAATA 578183 Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTC-AAA 117452 || || ||| || || |||| ||| || || || || | | | || | | || Sbjct 578182 CCTTCAACAGCAGCGAAAGCAACAAGACGTTCAGC-AAATAATGCTTCCTTATCACTAAT 578124 Query 117453 CCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC-TTCA- 117510 |||| | | ||||| | |||||||||| |||||| || ||| ||| || || || | Sbjct 578123 CCATCTTAAAGCCCAATCTGCCTTCTTCTTAATACAAGGAACATTTTCAATAGCATTGAA 578064 Query 117511 -AATAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGT 117569 || || | || || ||| ||| ||||| ||| ||||||| ||| ||||||||| Sbjct 578063 TAAAAATTCACGCTCTTTAGA---ATCTTTAATATATGTGTCAATTAATAGTGAATATGT 578007 Query 117570 TTCGCCATGAACCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTA 117628 || || | ||| ||| || | ||| | | || || | ||||| | Sbjct 578006 CTCAGAGTGTATATTTTCCATCAT-GATTTGGAAACCATAAAAGCACTTAGCTTCTGGTG 577948 Query 117629 TCTGCACTTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAG 117688 | || || ||| ||| ||| || | | | ||| || |||||| ||||| || ||| Sbjct 577947 TTTGAACCTCAGCCGAAAAGTTTTCAACTAAATTTTCGTTAACAATACCATCTGAAGCAG 577888 Query 117689 CAAAGAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCAGGGTCTT---CC 117745 | || || || | || | || || |||| || ||| || | || || Sbjct 577887 CGAAAAAGGCTAAGACGCGTGAAATAAAAAAACGCTCATCTTTATTAAGCTTATTTTCCC 577828 Query 117746 AGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA-ATTGCTCATTTGAGCC 117804 | || ||| |||||| ||||||| |||||| |||||||| | | | || |||| Sbjct 577827 AATCACCAATATCTTTACTTAAATCAATTTCTTCAGCAGTCCAGAAAGAT-GCTTCAGCC 577769 Query 117805 TTTTTATAGAGTTCCCAGA-GTTGTGGATACTTCAGGGGGAAGA 117847 |||||||| | || ||||| | ||||| |||| | ||||||| Sbjct 577768 TTTTTATACATTTGCCAGATCTCGTGGA-ACTTAATTGGGAAGA 577726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979797032640