Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq2 163 3e-35 >seq2 Length=1749581 Score = 163 bits (180), Expect = 3e-35 Identities = 464/697 (67%), Gaps = 26/697 (4%) Strand=Plus/Plus Query 154422 GATTTCTCATTAGTAAATGGTATGGTTCCACTTGGCAGTTGCACAATGAAATTAAATGCA 154481 ||||| ||| | | || ||||| |||||||||| |||||||||||| | |||||| Sbjct 139852 GATTTATCACTTGCCGATAGTATGATTCCACTTGGTTCCTGCACAATGAAACTCAATGCA 139911 Query 154482 GCAGCAGAACTAATGCCTGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATACACCT 154541 | | || | || || | ||||| || |||||||| | ||||| | |||| Sbjct 139912 ACTGTTGAGATGATTCCAATTACATGGCCTGAATTTGCTAATATCCATCCTTTTGCACC- 139970 Query 154542 ATGATA-CAGACCATGGGTTAT-CAGAAA--ATTATAGATGACTTACAGAAATGGTTATG 154597 | || | || ||| ||||| ||||| |||| | | || |||| || | || Sbjct 139971 ACGAAATCAAACCGAAGGTTACACAGAACTGATTACCGCT---TTTGAGAA--GGATTTG 140025 Query 154598 --TGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAG 154655 |||||| || |||||||| | | |||||| || || | || | || ||||| Sbjct 140026 GCTGATATTACTGGGTTTGACGCCACTTCATTAATGCCGAATTCTGGTGCTCAAGGTGAA 140085 Query 154656 TATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCA-GGAGATGATAAAAGAAA 154714 ||| |||| || | ||| ||| || | | || | | || || ||| ||||| Sbjct 140086 TATACAGGCCTCAGGACCATCAGAGCCTATTTTGA-GGCTAATGGCGAATCTAACAGAAA 140144 Query 154715 TGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGG 154774 ||| ||||| || || | |||||| || || || ||||| ||| ||||| ||||| || Sbjct 140145 TGTCTGTTTAATTCCTGTGTCAGCTCACGGTACCAATCCCGCTTCTGCTGCTATGGCGGG 140204 Query 154775 GATGAAAGTTGTAGGTGTCAAGTG-TGATGATGATGGTAACATAGACATCAAAGATCTAG 154833 | | || || ||| || || | || | ||||| |||| | |||| | | Sbjct 140205 CCTTACGGTAGTTCCTGTTAAATGCTTATC-TAATGGTTCTTTAGATTTGGAAGACTTGG 140263 Query 154834 AGAAGAAAGC----AATCATGAATACATTTGAACTGTCATGTATTATGATTACATACCCA 154889 | ||||| || |||| ||| | || | ||||| ||| |||| || || Sbjct 140264 AATCTAAAGCTAAGAAACATGCCGACAAT----CTTGCTTGTATGATGGTTACCTATCCC 140319 Query 154890 TCTACACATGGTGTATTTGAAACTAACATTAG-ACAGATATGTAAGATCGTTCATGACAA 154948 || ||| ||||| ||||||| || || || | || ||| ||| || |||| || || Sbjct 140320 TCCACATATGGTTTATTTGAGCCTGGTATCAGGAAAGCTATCGAAG-TCATTCACGAGAA 140378 Query 154949 TGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACC 155008 |||||| || || ||||||||||| || || | || || ||||| || || | | || Sbjct 140379 TGGTGGACAAGTTTATCTTGATGGTGCTAACATGAACGCTCAGGTTGGGTTAACTAGTCC 140438 Query 155009 ATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACA 155068 |||| | || |||||||| |||||| | || | || ||||| |||||||||||||| Sbjct 140439 TGGTGATTTAGGAGCAGATGTTTGTCATTTGAATCTCCACAAAACTTTCTGTATTCCACA 140498 Query 155069 TGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTA 155105 || ||||| || ||||| | || ||||| ||||| Sbjct 140499 CGGTGGTGGTGGCCCTGGTATTGGCCCTATTTGTGTA 140535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579211815338240