Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq2 163 3e-35
>seq2
Length=1749581
Score = 163 bits (180), Expect = 3e-35
Identities = 464/697 (67%), Gaps = 26/697 (4%)
Strand=Plus/Plus
Query 154422 GATTTCTCATTAGTAAATGGTATGGTTCCACTTGGCAGTTGCACAATGAAATTAAATGCA 154481
||||| ||| | | || ||||| |||||||||| |||||||||||| | ||||||
Sbjct 139852 GATTTATCACTTGCCGATAGTATGATTCCACTTGGTTCCTGCACAATGAAACTCAATGCA 139911
Query 154482 GCAGCAGAACTAATGCCTGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATACACCT 154541
| | || | || || | ||||| || |||||||| | ||||| | ||||
Sbjct 139912 ACTGTTGAGATGATTCCAATTACATGGCCTGAATTTGCTAATATCCATCCTTTTGCACC- 139970
Query 154542 ATGATA-CAGACCATGGGTTAT-CAGAAA--ATTATAGATGACTTACAGAAATGGTTATG 154597
| || | || ||| ||||| ||||| |||| | | || |||| || | ||
Sbjct 139971 ACGAAATCAAACCGAAGGTTACACAGAACTGATTACCGCT---TTTGAGAA--GGATTTG 140025
Query 154598 --TGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAG 154655
|||||| || |||||||| | | |||||| || || | || | || |||||
Sbjct 140026 GCTGATATTACTGGGTTTGACGCCACTTCATTAATGCCGAATTCTGGTGCTCAAGGTGAA 140085
Query 154656 TATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCA-GGAGATGATAAAAGAAA 154714
||| |||| || | ||| ||| || | | || | | || || ||| |||||
Sbjct 140086 TATACAGGCCTCAGGACCATCAGAGCCTATTTTGA-GGCTAATGGCGAATCTAACAGAAA 140144
Query 154715 TGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGG 154774
||| ||||| || || | |||||| || || || ||||| ||| ||||| ||||| ||
Sbjct 140145 TGTCTGTTTAATTCCTGTGTCAGCTCACGGTACCAATCCCGCTTCTGCTGCTATGGCGGG 140204
Query 154775 GATGAAAGTTGTAGGTGTCAAGTG-TGATGATGATGGTAACATAGACATCAAAGATCTAG 154833
| | || || ||| || || | || | ||||| |||| | |||| | |
Sbjct 140205 CCTTACGGTAGTTCCTGTTAAATGCTTATC-TAATGGTTCTTTAGATTTGGAAGACTTGG 140263
Query 154834 AGAAGAAAGC----AATCATGAATACATTTGAACTGTCATGTATTATGATTACATACCCA 154889
| ||||| || |||| ||| | || | ||||| ||| |||| || ||
Sbjct 140264 AATCTAAAGCTAAGAAACATGCCGACAAT----CTTGCTTGTATGATGGTTACCTATCCC 140319
Query 154890 TCTACACATGGTGTATTTGAAACTAACATTAG-ACAGATATGTAAGATCGTTCATGACAA 154948
|| ||| ||||| ||||||| || || || | || ||| ||| || |||| || ||
Sbjct 140320 TCCACATATGGTTTATTTGAGCCTGGTATCAGGAAAGCTATCGAAG-TCATTCACGAGAA 140378
Query 154949 TGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACC 155008
|||||| || || ||||||||||| || || | || || ||||| || || | | ||
Sbjct 140379 TGGTGGACAAGTTTATCTTGATGGTGCTAACATGAACGCTCAGGTTGGGTTAACTAGTCC 140438
Query 155009 ATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACA 155068
|||| | || |||||||| |||||| | || | || ||||| ||||||||||||||
Sbjct 140439 TGGTGATTTAGGAGCAGATGTTTGTCATTTGAATCTCCACAAAACTTTCTGTATTCCACA 140498
Query 155069 TGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTA 155105
|| ||||| || ||||| | || ||||| |||||
Sbjct 140499 CGGTGGTGGTGGCCCTGGTATTGGCCCTATTTGTGTA 140535
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579211815338240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |