Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq2 158 1e-33 >seq2 Length=1749581 Score = 158 bits (174), Expect = 1e-33 Identities = 463/698 (66%), Gaps = 28/698 (4%) Strand=Plus/Plus Query 159097 GATTTCTCATTAGTAAATGGTATGGTTCCACTTGGTAGTTGTACTATGAAACTAAACGCA 159156 ||||| ||| | | || ||||| ||||||||||| || || |||||||| || ||| Sbjct 139852 GATTTATCACTTGCCGATAGTATGATTCCACTTGGTTCCTGCACAATGAAACTCAATGCA 139911 Query 159157 GCATCAGAACTGATGCCTGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATACACCT 159216 | || |||| || | ||||| || |||||||| | ||||| | |||| Sbjct 139912 ACTGTTGAGATGATTCCAATTACATGGCCTGAATTTGCTAATATCCATCCTTTTGCACC- 139970 Query 159217 ATGATA-CAGACCATGGGTTATCAAAAAATTATAGATGAC----TTACAGAAATGGTTAT 159271 | || | || ||| ||||| || | || | ||| || || |||| || | | Sbjct 139971 ACGAAATCAAACCGAAGGTTA-CACAGAACT---GATTACCGCTTTTGAGAA--GGATTT 140024 Query 159272 G--TGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGA 159329 | |||||| || |||||||| | | |||||| || || | || | || ||||| Sbjct 140025 GGCTGATATTACTGGGTTTGACGCCACTTCATTAATGCCGAATTCTGGTGCTCAAGGTGA 140084 Query 159330 GTATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCA-GGAGATGATAAAAGAA 159388 ||| |||| || | ||| ||| || | | || | | || || ||| |||| Sbjct 140085 ATATACAGGCCTCAGGACCATCAGAGCCTATTTTGA-GGCTAATGGCGAATCTAACAGAA 140143 Query 159389 ATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAG 159448 |||| ||||| || || | |||||| || || || ||||| || || || | ||||| | Sbjct 140144 ATGTCTGTTTAATTCCTGTGTCAGCTCACGGTACCAATCCCGCTTCTGCTGCTATGGCGG 140203 Query 159449 GGATGAAAGTTGTAGGTGTCAAGTG-TGATGATGATGGCAACATAGACATCAAAGATCTA 159507 | | | || || ||| || || | || | |||| |||| | |||| | Sbjct 140204 GCCTTACGGTAGTTCCTGTTAAATGCTTATC-TAATGGTTCTTTAGATTTGGAAGACTTG 140262 Query 159508 GAGAAGAAAGC----AATCATGAATACATTTGAACTGTCATGTATTATGATTACATATCC 159563 || ||||| || |||| ||| | || | ||||| ||| |||| ||||| Sbjct 140263 GAATCTAAAGCTAAGAAACATGCCGACAAT----CTTGCTTGTATGATGGTTACCTATCC 140318 Query 159564 ATCTACACATGGTGTATTTGAAACAAACATCAG-ACAGATATGTAAGATTGTTCATGAGA 159622 || ||| ||||| ||||||| | ||||| | || ||| ||| | |||| |||| Sbjct 140319 CTCCACATATGGTTTATTTGAGCCTGGTATCAGGAAAGCTATCGAAG-TCATTCACGAGA 140377 Query 159623 ATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAAC 159682 ||||||| || || |||||||||||||| || | || || ||||| || || | | | Sbjct 140378 ATGGTGGACAAGTTTATCTTGATGGTGCTAACATGAACGCTCAGGTTGGGTTAACTAGTC 140437 Query 159683 CATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCAC 159742 | |||| | || |||||||| |||||| | || | || || || ||||||||||||| Sbjct 140438 CTGGTGATTTAGGAGCAGATGTTTGTCATTTGAATCTCCACAAAACTTTCTGTATTCCAC 140497 Query 159743 ATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTA 159780 | || ||||| || ||||| | || |||||| ||||| Sbjct 140498 ACGGTGGTGGTGGCCCTGGTATTGGCCCTATTTGTGTA 140535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050200312960