Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq8 154 3e-32
seq5 132 1e-25
seq12 120 7e-22
>seq8
Length=1087023
Score = 154 bits (170), Expect = 3e-32
Identities = 168/223 (75%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||||||| | || | |||||| || |||||||| ||||| || | | ||
Sbjct 676691 TCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGATAAGGT 676750
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| || ||||| | || ||||| || ||||| | || |||||||||||||||||| ||
Sbjct 676751 ACGTCCGTCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGAATTCC 676810
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| ||||||||||||||| ||| || || ||||| ||||| || ||| || || ||
Sbjct 676811 TTCCTTGTCTTGAATTTTTGACTTAACATTGTCAATAGTGTCAGAGGATTCAACCTCGAG 676870
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
|||| || || || ||||| ||||| ||||| | ||||||
Sbjct 676871 AGTAATGGTTTTACCGGTCAAGGTTTTGACGAAGATCTGCATT 676913
>seq5
Length=1301127
Score = 132 bits (146), Expect = 1e-25
Identities = 171/235 (73%), Gaps = 1/235 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||||||| | || | ||| || || ||||| || |||||||| | | |||
Sbjct 1173651 TCTTAATCTCAAAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAATCAGATAAAGT 1173710
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| |||||||| | |||||||| || ||||| | ||||||||||||||||| || ||
Sbjct 1173711 ACGTCCATCTTCTAATTGCTTACCAGCAAAGATTAAACGTTGTTGGTCTGGAGGGATTCC 1173770
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| ||||| || || ||| ||| || || ||||| || || || || || || ||
Sbjct 1173771 TTCCTTGTCCTGGATCTTTGACTTAACATTGTCAATAGTATCGGATGACTCTACCTCGAG 1173830
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTTATGGTTACTTG 195153
||||| ||||| || || | ||||| || || | ||||| | |||| | |||
Sbjct 1173831 GGTAATAGTCTTACCGGTAAGGGTTTTGACAAAAATCTGCATCT-TGGTGATTTG 1173884
>seq12
Length=712717
Score = 120 bits (132), Expect = 7e-22
Identities = 161/224 (72%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||| | ||| | || | ||| || || ||||| || ||||| || | | ||
Sbjct 150930 TCTCAATCTGAGAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAGTCAGATAAGGT 150989
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| |||||||| | |||||||| || || || | |||||||| ||||||||||| ||
Sbjct 150990 ACGGCCATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATTCC 151049
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|| || |||||||| ||| ||||| || ||||| ||||| || || || |||||
Sbjct 151050 CTCCTTATCTTGAATCTTTGATTTGACATTATCAATAGTGTCAGATGACTCAACCTCAAG 151109
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
|||| ||||| ||||| | ||||| || || | |||||||
Sbjct 151110 AGTAATTGTCTTCCCTGTAAGGGTTTTAACAAAAATCTGCATTT 151153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109479666728312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |