Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq8 154 3e-32 seq5 132 1e-25 seq12 120 7e-22 >seq8 Length=1087023 Score = 154 bits (170), Expect = 3e-32 Identities = 168/223 (75%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| | || | |||||| || |||||||| ||||| || | | || Sbjct 676691 TCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGATAAGGT 676750 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | || ||||| | || ||||| || ||||| | || |||||||||||||||||| || Sbjct 676751 ACGTCCGTCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGAATTCC 676810 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||||||||||||| ||| || || ||||| ||||| || ||| || || || Sbjct 676811 TTCCTTGTCTTGAATTTTTGACTTAACATTGTCAATAGTGTCAGAGGATTCAACCTCGAG 676870 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 |||| || || || ||||| ||||| ||||| | |||||| Sbjct 676871 AGTAATGGTTTTACCGGTCAAGGTTTTGACGAAGATCTGCATT 676913 >seq5 Length=1301127 Score = 132 bits (146), Expect = 1e-25 Identities = 171/235 (73%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| | || | ||| || || ||||| || |||||||| | | ||| Sbjct 1173651 TCTTAATCTCAAAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAATCAGATAAAGT 1173710 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| | |||||||| || ||||| | ||||||||||||||||| || || Sbjct 1173711 ACGTCCATCTTCTAATTGCTTACCAGCAAAGATTAAACGTTGTTGGTCTGGAGGGATTCC 1173770 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||| || || ||| ||| || || ||||| || || || || || || || Sbjct 1173771 TTCCTTGTCCTGGATCTTTGACTTAACATTGTCAATAGTATCGGATGACTCTACCTCGAG 1173830 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTTATGGTTACTTG 195153 ||||| ||||| || || | ||||| || || | ||||| | |||| | ||| Sbjct 1173831 GGTAATAGTCTTACCGGTAAGGGTTTTGACAAAAATCTGCATCT-TGGTGATTTG 1173884 >seq12 Length=712717 Score = 120 bits (132), Expect = 7e-22 Identities = 161/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| | ||| | || | ||| || || ||||| || ||||| || | | || Sbjct 150930 TCTCAATCTGAGAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAGTCAGATAAGGT 150989 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| | |||||||| || || || | |||||||| ||||||||||| || Sbjct 150990 ACGGCCATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATTCC 151049 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || || |||||||| ||| ||||| || ||||| ||||| || || || ||||| Sbjct 151050 CTCCTTATCTTGAATCTTTGATTTGACATTATCAATAGTGTCAGATGACTCAACCTCAAG 151109 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 |||| ||||| ||||| | ||||| || || | ||||||| Sbjct 151110 AGTAATTGTCTTCCCTGTAAGGGTTTTAACAAAAATCTGCATTT 151153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109479666728312