Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq21 104 3e-17 >seq21 Length=453462 Score = 104 bits (114), Expect = 3e-17 Identities = 160/226 (71%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 104989 AGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAATATAT 105048 ||| |||||| | || || | ||||| || |||||||| ||| ||| ||| |||||| Sbjct 131117 AGAGGGTGATCTGGGTCCTGTATATGGCTTCCAATGGAGGCATTTTGGTGCTAAATATAC 131176 Query 105049 CGACTGTGATACCGACTATACCGGCCAAGGTATAGACCAATTAAGTCAAGTTATAGAAAC 105108 | |||||| | || ||||| || || ||| | || || ||| ||||||| | | Sbjct 131177 AAATTGTGATGCGGATTATACAGGTCAGGGTGTTGATCAGTTAGCGGAAGTTATTTATAA 131236 Query 105109 TATAAAAAATAACCCCGGGTGTCGAAGAATAATTATAGATAGTTGGAATGTGTCACAATT 105168 ||||||||||||| ||||||||| ||| || | |||||| | | || Sbjct 131237 ATTAAAAAATAACCCATATGATCGAAGAATCATTTTATCTGCCTGGAATCCTGCGGATTT 131296 Query 105169 ATCAGATATGGCTCTTCCACCGTGTCAT-TGTTTGGTACAATTTTA 105213 ||| | |||||||| ||||| |||||| ||||| | ||||||||| Sbjct 131297 TTCAAAAATGGCTCTGCCACCATGTCATATGTTT-GCACAATTTTA 131341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658402080714560