Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1 686 0.0 seq14 360 2e-94 >seq1 Length=2214157 Score = 686 bits (760), Expect = 0.0 Identities = 1238/1810 (68%), Gaps = 43/1810 (2%) Strand=Plus/Plus Query 47013 GTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTA 47072 |||| |||||||||||| ||||| ||||||||| |||| ||||| ||||||||||| Sbjct 30763 GTTCTTAAATAATACATTCCAGTTTTTAAACCTTTTTTCCAGCCATAAAAATGCATACTT 30822 Query 47073 GTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATA 47132 |||||||| | || | ||||| ||||||||||||||| ||||||||| Sbjct 30823 GTTAATTTCCCCATTGTTGGAGATTTAATATAAATATTAAGAGATTGTGATTGATCAATA 30882 Query 47133 AATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTT 47192 || ||| | | |||||| || | ||| | ||| |||||| || ||||| || ||| Sbjct 30883 AAAGCAGCACGATCAGCAGCTAAATCAATAATTGTTTTTTGTGATAATTCCCAAACAGTT 30942 Query 47193 TTATAAATTTGTTTAATGTCTTCTGGGAG--ATTAG-TATTTTGAATAGATCCTCCgttt 47249 ||||| | | |||||| | || ||| | || | ||||| ||| ||||| || Sbjct 30943 TTATATAAATCTTTAATTTTTTGTGGTATCAATGGGATATTTGCAATTGATCCA---TTA 30999 Query 47250 tctataattttgtt--ttttaatt----catttgaccaaagttttcgttcagttaatgtt 47303 || |||| | || |||||||| |||| ||| | | ||| ||| | Sbjct 31000 TCACTAATAATTTTACTTTTAATTGAATCATT---CCATATACCTAAATCAACTAAATCT 31056 Query 47304 tttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATA 47363 ||||| | |||||||||||||||||||| || | || ||||| | ||||| ||| Sbjct 31057 TTTAATAACCATGGATTAACAATTTGAAATTCACCTGCTAAAACTCTTCTACTATAAATA 31116 Query 47364 TTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTA 47423 || ||||||||||| | | |||||||| ||||| |||||| | ||||||||||| Sbjct 31117 TTTGAAGTATATGGTTCAAAACATTCATTAAATCCAAGAATTTGTGATGTTGATGCTGTT 31176 Query 47424 GGCATGGATGCAACTAATAAGCTA-TTTCTTACTCCATATTTTTGTATCTNNNNNNNNNN 47482 ||||| | |||||| || ||| | ||||||| ||||||||| || | Sbjct 31177 GGCATTGGTGCAAC-AAGAAGTGAATTTCTTAAACCATATTTTGACATTTTTTGTTTCAA 31235 Query 47483 NNGTTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCC 47542 | |||||||||||| || | ||| ||||||||| ||||||||||| | ||| || Sbjct 31236 TAAATCCCAATCCCAAAGTTCAGTTGGTTGAACATTCCATAAATCATATTGTAAAATACC 31295 Query 47543 TTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACA 47602 || | | | || || || | ||| |||| ||| || || || ||| || | |||||| Sbjct 31296 TTGAGATGTTGGTGATCCTTCATAAGTTTCATATGGTCCTAATTCTTTTGCTAATTCACA 31355 Query 47603 ACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTT-G 47661 |||||| | ||| || ||| || ||||||||||||| ||||||| || || | Sbjct 31356 TGATGCTTCAACAGCAGCATGATAAATAGTTTCAAATATTTGAATGTTTA-ATAATTTAG 31414 Query 47662 CTTCTGATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACAC 47721 |||| | ||| ||||| || | || | ||| || || |||||||||| Sbjct 31415 CTTCAGGTGAATCAAATGGTAAACGAAGACACATAAAAGCATCAGCTAAACCTTGAACAC 31474 Query 47722 CAATACCAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGT 47781 | | | ||||||||||||| | |||| ||| ||||| | |||||| | | Sbjct 31475 CTAAAGCAATTGGTCTATGTCTCATATTTGAATTTCTTGCTTCAATAACTGGATAATAAT 31534 Query 47782 TTATATCTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTAT 47841 | |||| ||||||||||||| | ||| || | ||| | Sbjct 31535 TCCTATCAATAATTTTATTTAAATTACGAACAACAACTTTTGTAATATCATGAAGTTTTT 31594 Query 47842 TAAAATCA-AACTTG-----TTATTT---ATAACAA-ACCTATTA--AGTGCTATAGATG 47889 ||||| | || ||| |||| | ||| ||| | | || | ||||| |||| Sbjct 31595 GAAAATTATAAATTGAAACGTTATCTTCAATATCAATAAATGTTGGTAATGCTAATGATG 31654 Query 47890 CTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGAT 47949 ||| ||| || ||||| || |||| || || ||||| | |||||| ||||| || Sbjct 31655 CTAAATTGCAAACAGCAACTTCATCGGGTGCAGAATATTCAACAATTTCACAACATAAAT 31714 Query 47950 TACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGT 48009 | || ||| || ||||| | ||||| |||||| | || |||||||| || || | Sbjct 31715 TTGAACTTTTTATTGTACCAAGATTTTTTTGATTACTTTTTTTATTACATGCATCTTTAT 31774 Query 48010 AAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCC 48069 |||||||||| || | ||||||||| | || | ||| | || || | ||||| | Sbjct 31775 AAAGCATAAATGGAATACCAGTTTCTGTTTGTGCTTCCAAAATTGAATACCAAAGTTTTT 31834 Query 48070 TAGCCTTTAT------AACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACT 48123 ||| || || ||||||| || ||| || |||| || ||| |||| || Sbjct 31835 GAGCTTTAATTGTTTTAACAGCTTTACCTTCTTTTTCATATT----TTTCATATAATGCT 31890 Query 48124 TCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATG 48183 || ||||||||| ||||| |||| | ||||| |||||| || | | |||| Sbjct 31891 TC--AAATTCATCACCATAAACATCTGAAAGACCAGGGACTTCATTTGGGGAAAATAATG 31948 Query 48184 ACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAA 48243 |||| | ||| | || ||||| ||||||||| ||| | ||||| | ||| || Sbjct 31949 ACCATTGACCATTTTGTTCAACTCTTCTCATAAATAAATCAGAAATCCATAATGCTGCAA 32008 Query 48244 ATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCA 48303 ||||||| || | ||| | |||||| || ||| ||| || ||| |||| | | || | Sbjct 32009 ATAAATCTCTTGCTCTAATTTCTTCTTTACCATGATTTTTTCTAATATCAATATAATCAA 32068 Query 48304 TTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTC 48363 | |||||||||||||||||| ||||| ||||| | |||| |||| ||||||||| | Sbjct 32069 AAACATCAGCATGCCATGGTTCCAAATACATTGCAAAAGCACCAGGTCTTTTATTACCAC 32128 Query 48364 CTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTG 48423 ||||||| | |||||| |||||||||||| |||| | ||||||||| | ||||||||| | Sbjct 32129 CTTGATCAACATATCTTGCAGTATTGTTAAAAACACGTAACATTGGAATAATACCATTAG 32188 Query 48424 ATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAAATAC 48483 || ||||||| || || | ||||||| ||| || ||| |||||| ||| || || Sbjct 32189 ATGTACCATTTGTACCTGCAATATAAGAACCAGTACTTCTAATATTATGAATATGAAGAC 32248 Query 48484 CTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTT 48543 | || || || || ||| || |||| |||||| ||| | ||||||||||| |||| Sbjct 32249 CAATTCCTCCAGCTGATTTTGAAATTAAAGCACAAGTTTTTAAAGTATCATAAATACCTT 32308 Query 48544 CTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTC 48603 | || ||| ||| ||||| | ||||||||| ||||||||| || ||| ||| | Sbjct 32309 CAATTGAATCTTCTTTCATAGCAATAAGAAAACAAGAAGACATTTGTGGTTGAGGAGTAC 32368 Query 48604 CTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATG 48663 | | ||||||||| || ||||| |||||| | || |||| ||| | || ||||| | Sbjct 32369 CAGCATTAAATAAAGTGGGAGAAGCATGAGTGAAATATTTTAATGACATTAAATTATAGG 32428 Query 48664 TTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATAT 48723 ||||||| || || ||||| ||| ||||| | || || | ||| | | || Sbjct 32429 TTTCAATGACTTTTTCAATATCATCACCATGAATACCAACAGCAACTCTCATAATTAAAT 32488 Query 48724 ATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTT 48783 ||| ||||||||| ||| ||| || | | | ||||| |||||| |||| | |||| Sbjct 32489 GTTGTGGTCTTTCAGCAACTTTACCATCAAGTCTTAAAAGGTATGATCTTTCAAGAGTTT 32548 Query 48784 TAAAACCAAA 48793 |||||||||| Sbjct 32549 TAAAACCAAA 32558 >seq14 Length=670130 Score = 360 bits (398), Expect = 2e-94 Identities = 637/923 (69%), Gaps = 7/923 (1%) Strand=Plus/Plus Query 18657 CATTACTCCCATTTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTC 18716 ||| || || | |||||||| || | |||||| ||||||||||||||||| || || | Sbjct 211668 CATAACACCTGTCTTTTGATAATCTGAAACTCTCTTTTCAAAGAAATTAGTCTTACCAAC 211727 Query 18717 TAATGATATACATTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCC 18776 | || ||| ||||||||| || || |||||| | ||| ||| | ||||| ||| Sbjct 211728 AAGAGAAATATTTTCCATAAAGTCGAAAGGATTTGTAGCATCATAAACCTTTTTATTTCC 211787 Query 18777 TAATTCTAATAGTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATT 18836 || | | || | |||||| || ||| ||| ||| ||| ||||| || ||||| Sbjct 211788 CAAAGCAACGAGCAATCTATCAGCAACATATTCAATGTATTGACACATCAAGTCGCAATT 211847 Query 18837 CATTCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGC 18896 ||| || | |||| ||||| || || || |||| |||||| ||| || || || Sbjct 211848 CATACCAAGTAATGAGACAGGAAGAGCCTCGGTAAAGTATTCTTTTTCAATCACAACAGC 211907 Query 18897 CTCTGATATAATAGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACAT 18956 || | | ||| | || || || || ||| | | | | || || | Sbjct 211908 TTCAGTGACAATTTTCTCGACAATAGCTGGATCAGGTTTATTTTGCAAGTGAGCGAATAA 211967 Query 18957 CAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGT 19016 |||||| ||||||| |||||| || || |||| || || | |||||||||||| || Sbjct 211968 TAAACATCCAAAATCTGTATGTAGACCTTCATCTCGACAGATAAGTTCATTAGAAAAGGT 212027 Query 19017 TAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAA 19076 |||||||||||| | ||||| ||||| ||||| ||||| | ||||||||||||||| || Sbjct 212028 TAAACCAGGCATTAAACCTCTCTTTTTCAACCAAAATATGGCAGCAAATGATCCAGAGAA 212087 Query 19077 GAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATT 19136 |||| |||||| | | |||||||||||||| || ||| ||| | || |||| | Sbjct 212088 AAATACACCTTCAATAGTTGCAAAAGCAACTAATCGTTCCCCAAATAATGCTTCATCGTC 212147 Query 19137 ATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGA 19196 | ||||||||||| | ||| |||||||||| ||| | |||||| || | | || | Sbjct 212148 GTTAATCCATTTCAAAGTCCAGTCAGCCTTCTGTTTGATACATGGGATGTTGACAATTGC 212207 Query 19197 ATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTA 19256 ||||| ||| | ||| | ||| ||| || | ||||| | || | ||| Sbjct 212208 ATTAAGAAGAAAGTCTTTTTCAATAGGGTCTCTAATGTAAGTATCTAACTGTACAGAGTA 212267 Query 19257 CATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGT 19316 |||| ||||| ||||||||| | ||||| || || || |||| | | ||||| | Sbjct 212268 AGTTTCAGAATGTATATTTTCTGTCATGATCTGGAACCCATAGAAACTTTTGGCTTCAGG 212327 Query 19317 TATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGC 19376 || || || || |||| | || || |||||||||||||| | |||||| || Sbjct 212328 AATTTGAACCTCTGCTGAAAAGTTCTCAACTAAATTTTCATTAACAAGACCATCAGATGC 212387 Query 19377 TGCAAAAAATGCTAATACATGTTTA-ATAAAATGTTTTTCATCTGAGGTTAA---TGTAT 19432 ||||||||| || ||||| | || | ||||| | | |||| | | |||| || | Sbjct 212388 TGCAAAAAAAGCCAATAC-TCTTGAGATAAAGAATCTCTCATTTTCGTTTAACTTAGTGT 212446 Query 19433 TCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTC-T 19491 ||| ||| ||||| |||| | ||| | ||| || ||||| || |||||||| | Sbjct 212447 CCCAGTCAGGTATATCCTTAGCAAGATCAATTTCCTCTGTAGTCCAGAAGGAAGCCTCGT 212506 Query 19492 GCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTT 19551 || || || ||||| | ||| || |||| ||||| || ||||| ||||||||||| | Sbjct 212507 GC-TTCTTGTACATTTGCCAAATTTCACCATATTTAATTGGAAACATAACAAATCTGCGT 212565 Query 19552 TTATTTTCTTTAAGAATAGGTTC 19574 || ||||| || |||| ||||| Sbjct 212566 TTGTTTTCCTTGAGAAGTGGTTC 212588 Score = 360 bits (398), Expect = 2e-94 Identities = 628/911 (69%), Gaps = 7/911 (1%) Strand=Plus/Minus Query 18669 TTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACA 18728 ||||||||| || | |||||| || || || || || || || || ||||||| ||| Sbjct 578597 TTTTTGATAATCAGAAACTCTCTTCTCGAAAAAGTTTGTCTTACCAGCTAATGAAATATT 578538 Query 18729 TTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAG 18788 ||||| || ||||||||||| | ||||| || || || ||| |||| | | || Sbjct 578537 CTCCATGAAGTCAAATGGATTAGTAACATTGTAAATCTTCTTGTTACCTAGAGCAACTAA 578478 Query 18789 TAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAA 18848 || | ||| || ||| ||| || |||| ||||| || |||||||| || | ||| Sbjct 578477 AAGACGATCGGCAACATATTCAACATATTGACACATCAAATTGCAATTCATACCAAGTAA 578418 Query 18849 TTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAAT 18908 | | || || |||||||||| |||| | || ||| |||| ||||||| || || Sbjct 578417 TGAGGCTGGAAGAGCATCTGTAAAGTATTCCTTCTCAATAGTTACAGCCTCTGTAATTAT 578358 Query 18909 AGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAA 18968 | |||| || | || || | | | ||| ||| | || || ||||| Sbjct 578357 CTTTTCAACAATAATTGGATCGGGTCTATTTTCCAAATGGGAAAATAATAAGCAAGCAAA 578298 Query 18969 ATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCAT 19028 |||| || || || || || | || ||||||||||||||||| || | || ||||| Sbjct 578297 ATCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTAGAAAAAGTAAGGCCTGGCAT 578238 Query 19029 CAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTC 19088 | ||||| |||||||||||||| ||||| || || || ||||| || || |||||||| Sbjct 578237 TAAACCTCTCTTTTTTAACCAGAAAATAGATGCGAAAGAACCAGAGAAAAAAATACCTTC 578178 Query 19089 TACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTT 19148 || || || |||||||| || | ||| || | || || |||| | ||||||| | Sbjct 578177 AACAGCAGCGAAAGCAACAAGACGTTCAGCAAATAATGCTTCCTTATCACTAATCCATCT 578118 Query 19149 CAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATA 19208 | |||||||| |||||||| || | ||| || | | || |||| ||| |||| | | Sbjct 578117 TAAAGCCCAATCTGCCTTCTTCTTAATACAAGGAACATTTTCAATAGCATTGAATAAAAA 578058 Query 19209 CATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCT--GAA 19266 |||||| | | |||||||| ||||| || || ||| | || | || ||| || Sbjct 578057 TTCACGCTCTTTAGAATCTTTAATATATGTGTCAATTAAT--AGTGAATATGTCTCAGAG 578000 Query 19267 TGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACT 19326 || |||||||| || || || || || ||||| || | ||||||| | | || || Sbjct 577999 TGTATATTTTCCATCATGATTTGGAAACCATAAAAGCACTTAGCTTCTGGTGTTTGAACC 577940 Query 19327 TCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAAT 19386 ||| |||| |||| || |||||||| ||||| || ||||| ||| || ||||| Sbjct 577939 TCAGCCGAAAAGTTTTCAACTAAATTTTCGTTAACAATACCATCTGAAGCAGCGAAAAAG 577880 Query 19387 GCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATT---CCAATCATTA 19443 ||||| || || ||||||| |||||| | | |||| ||||||| | Sbjct 577879 GCTAAGACGCGTGAAATAAAAAAACGCTCATCTTTATTAAGCTTATTTTCCCAATCACCA 577820 Query 19444 ATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATAC 19503 ||||||||| |||||| | ||||||| | ||||| ||||| || || || ||||||||| Sbjct 577819 ATATCTTTACTTAAATCAATTTCTTCAGCAGTCCAGAAAGATGCTTCAGCCTTTTTATAC 577760 Query 19504 ATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTCTTTA 19563 || | ||| || || | | | || || || | |||||||| |||||||||| | Sbjct 577759 ATTTGCCAGATCTCGTGGAACTTAATTGGGAAGAGGACAAATCTTCTTTTATTTTCCATT 577700 Query 19564 AGAATAGGTTC 19574 | ||| ||||| Sbjct 577699 AAAATGGGTTC 577689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562107844415040