Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq1 686 0.0
seq14 360 2e-94
>seq1
Length=2214157
Score = 686 bits (760), Expect = 0.0
Identities = 1238/1810 (68%), Gaps = 43/1810 (2%)
Strand=Plus/Plus
Query 47013 GTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTA 47072
|||| |||||||||||| ||||| ||||||||| |||| ||||| |||||||||||
Sbjct 30763 GTTCTTAAATAATACATTCCAGTTTTTAAACCTTTTTTCCAGCCATAAAAATGCATACTT 30822
Query 47073 GTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATA 47132
|||||||| | || | ||||| ||||||||||||||| |||||||||
Sbjct 30823 GTTAATTTCCCCATTGTTGGAGATTTAATATAAATATTAAGAGATTGTGATTGATCAATA 30882
Query 47133 AATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTT 47192
|| ||| | | |||||| || | ||| | ||| |||||| || ||||| || |||
Sbjct 30883 AAAGCAGCACGATCAGCAGCTAAATCAATAATTGTTTTTTGTGATAATTCCCAAACAGTT 30942
Query 47193 TTATAAATTTGTTTAATGTCTTCTGGGAG--ATTAG-TATTTTGAATAGATCCTCCgttt 47249
||||| | | |||||| | || ||| | || | ||||| ||| ||||| ||
Sbjct 30943 TTATATAAATCTTTAATTTTTTGTGGTATCAATGGGATATTTGCAATTGATCCA---TTA 30999
Query 47250 tctataattttgtt--ttttaatt----catttgaccaaagttttcgttcagttaatgtt 47303
|| |||| | || |||||||| |||| ||| | | ||| ||| |
Sbjct 31000 TCACTAATAATTTTACTTTTAATTGAATCATT---CCATATACCTAAATCAACTAAATCT 31056
Query 47304 tttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATA 47363
||||| | |||||||||||||||||||| || | || ||||| | ||||| |||
Sbjct 31057 TTTAATAACCATGGATTAACAATTTGAAATTCACCTGCTAAAACTCTTCTACTATAAATA 31116
Query 47364 TTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTA 47423
|| ||||||||||| | | |||||||| ||||| |||||| | |||||||||||
Sbjct 31117 TTTGAAGTATATGGTTCAAAACATTCATTAAATCCAAGAATTTGTGATGTTGATGCTGTT 31176
Query 47424 GGCATGGATGCAACTAATAAGCTA-TTTCTTACTCCATATTTTTGTATCTNNNNNNNNNN 47482
||||| | |||||| || ||| | ||||||| ||||||||| || |
Sbjct 31177 GGCATTGGTGCAAC-AAGAAGTGAATTTCTTAAACCATATTTTGACATTTTTTGTTTCAA 31235
Query 47483 NNGTTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCC 47542
| |||||||||||| || | ||| ||||||||| ||||||||||| | ||| ||
Sbjct 31236 TAAATCCCAATCCCAAAGTTCAGTTGGTTGAACATTCCATAAATCATATTGTAAAATACC 31295
Query 47543 TTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACA 47602
|| | | | || || || | ||| |||| ||| || || || ||| || | ||||||
Sbjct 31296 TTGAGATGTTGGTGATCCTTCATAAGTTTCATATGGTCCTAATTCTTTTGCTAATTCACA 31355
Query 47603 ACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTT-G 47661
|||||| | ||| || ||| || ||||||||||||| ||||||| || || |
Sbjct 31356 TGATGCTTCAACAGCAGCATGATAAATAGTTTCAAATATTTGAATGTTTA-ATAATTTAG 31414
Query 47662 CTTCTGATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACAC 47721
|||| | ||| ||||| || | || | ||| || || ||||||||||
Sbjct 31415 CTTCAGGTGAATCAAATGGTAAACGAAGACACATAAAAGCATCAGCTAAACCTTGAACAC 31474
Query 47722 CAATACCAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGT 47781
| | | ||||||||||||| | |||| ||| ||||| | |||||| | |
Sbjct 31475 CTAAAGCAATTGGTCTATGTCTCATATTTGAATTTCTTGCTTCAATAACTGGATAATAAT 31534
Query 47782 TTATATCTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTAT 47841
| |||| ||||||||||||| | ||| || | ||| |
Sbjct 31535 TCCTATCAATAATTTTATTTAAATTACGAACAACAACTTTTGTAATATCATGAAGTTTTT 31594
Query 47842 TAAAATCA-AACTTG-----TTATTT---ATAACAA-ACCTATTA--AGTGCTATAGATG 47889
||||| | || ||| |||| | ||| ||| | | || | ||||| ||||
Sbjct 31595 GAAAATTATAAATTGAAACGTTATCTTCAATATCAATAAATGTTGGTAATGCTAATGATG 31654
Query 47890 CTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGAT 47949
||| ||| || ||||| || |||| || || ||||| | |||||| ||||| ||
Sbjct 31655 CTAAATTGCAAACAGCAACTTCATCGGGTGCAGAATATTCAACAATTTCACAACATAAAT 31714
Query 47950 TACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGT 48009
| || ||| || ||||| | ||||| |||||| | || |||||||| || || |
Sbjct 31715 TTGAACTTTTTATTGTACCAAGATTTTTTTGATTACTTTTTTTATTACATGCATCTTTAT 31774
Query 48010 AAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCC 48069
|||||||||| || | ||||||||| | || | ||| | || || | ||||| |
Sbjct 31775 AAAGCATAAATGGAATACCAGTTTCTGTTTGTGCTTCCAAAATTGAATACCAAAGTTTTT 31834
Query 48070 TAGCCTTTAT------AACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACT 48123
||| || || ||||||| || ||| || |||| || ||| |||| ||
Sbjct 31835 GAGCTTTAATTGTTTTAACAGCTTTACCTTCTTTTTCATATT----TTTCATATAATGCT 31890
Query 48124 TCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATG 48183
|| ||||||||| ||||| |||| | ||||| |||||| || | | ||||
Sbjct 31891 TC--AAATTCATCACCATAAACATCTGAAAGACCAGGGACTTCATTTGGGGAAAATAATG 31948
Query 48184 ACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAA 48243
|||| | ||| | || ||||| ||||||||| ||| | ||||| | ||| ||
Sbjct 31949 ACCATTGACCATTTTGTTCAACTCTTCTCATAAATAAATCAGAAATCCATAATGCTGCAA 32008
Query 48244 ATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCA 48303
||||||| || | ||| | |||||| || ||| ||| || ||| |||| | | || |
Sbjct 32009 ATAAATCTCTTGCTCTAATTTCTTCTTTACCATGATTTTTTCTAATATCAATATAATCAA 32068
Query 48304 TTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTC 48363
| |||||||||||||||||| ||||| ||||| | |||| |||| ||||||||| |
Sbjct 32069 AAACATCAGCATGCCATGGTTCCAAATACATTGCAAAAGCACCAGGTCTTTTATTACCAC 32128
Query 48364 CTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTG 48423
||||||| | |||||| |||||||||||| |||| | ||||||||| | ||||||||| |
Sbjct 32129 CTTGATCAACATATCTTGCAGTATTGTTAAAAACACGTAACATTGGAATAATACCATTAG 32188
Query 48424 ATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAAATAC 48483
|| ||||||| || || | ||||||| ||| || ||| |||||| ||| || ||
Sbjct 32189 ATGTACCATTTGTACCTGCAATATAAGAACCAGTACTTCTAATATTATGAATATGAAGAC 32248
Query 48484 CTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTT 48543
| || || || || ||| || |||| |||||| ||| | ||||||||||| ||||
Sbjct 32249 CAATTCCTCCAGCTGATTTTGAAATTAAAGCACAAGTTTTTAAAGTATCATAAATACCTT 32308
Query 48544 CTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTC 48603
| || ||| ||| ||||| | ||||||||| ||||||||| || ||| ||| |
Sbjct 32309 CAATTGAATCTTCTTTCATAGCAATAAGAAAACAAGAAGACATTTGTGGTTGAGGAGTAC 32368
Query 48604 CTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATG 48663
| | ||||||||| || ||||| |||||| | || |||| ||| | || ||||| |
Sbjct 32369 CAGCATTAAATAAAGTGGGAGAAGCATGAGTGAAATATTTTAATGACATTAAATTATAGG 32428
Query 48664 TTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATAT 48723
||||||| || || ||||| ||| ||||| | || || | ||| | | ||
Sbjct 32429 TTTCAATGACTTTTTCAATATCATCACCATGAATACCAACAGCAACTCTCATAATTAAAT 32488
Query 48724 ATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTT 48783
||| ||||||||| ||| ||| || | | | ||||| |||||| |||| | ||||
Sbjct 32489 GTTGTGGTCTTTCAGCAACTTTACCATCAAGTCTTAAAAGGTATGATCTTTCAAGAGTTT 32548
Query 48784 TAAAACCAAA 48793
||||||||||
Sbjct 32549 TAAAACCAAA 32558
>seq14
Length=670130
Score = 360 bits (398), Expect = 2e-94
Identities = 637/923 (69%), Gaps = 7/923 (1%)
Strand=Plus/Plus
Query 18657 CATTACTCCCATTTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTC 18716
||| || || | |||||||| || | |||||| ||||||||||||||||| || || |
Sbjct 211668 CATAACACCTGTCTTTTGATAATCTGAAACTCTCTTTTCAAAGAAATTAGTCTTACCAAC 211727
Query 18717 TAATGATATACATTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCC 18776
| || ||| ||||||||| || || |||||| | ||| ||| | ||||| |||
Sbjct 211728 AAGAGAAATATTTTCCATAAAGTCGAAAGGATTTGTAGCATCATAAACCTTTTTATTTCC 211787
Query 18777 TAATTCTAATAGTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATT 18836
|| | | || | |||||| || ||| ||| ||| ||| ||||| || |||||
Sbjct 211788 CAAAGCAACGAGCAATCTATCAGCAACATATTCAATGTATTGACACATCAAGTCGCAATT 211847
Query 18837 CATTCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGC 18896
||| || | |||| ||||| || || || |||| |||||| ||| || || ||
Sbjct 211848 CATACCAAGTAATGAGACAGGAAGAGCCTCGGTAAAGTATTCTTTTTCAATCACAACAGC 211907
Query 18897 CTCTGATATAATAGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACAT 18956
|| | | ||| | || || || || ||| | | | | || || |
Sbjct 211908 TTCAGTGACAATTTTCTCGACAATAGCTGGATCAGGTTTATTTTGCAAGTGAGCGAATAA 211967
Query 18957 CAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGT 19016
|||||| ||||||| |||||| || || |||| || || | |||||||||||| ||
Sbjct 211968 TAAACATCCAAAATCTGTATGTAGACCTTCATCTCGACAGATAAGTTCATTAGAAAAGGT 212027
Query 19017 TAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAA 19076
|||||||||||| | ||||| ||||| ||||| ||||| | ||||||||||||||| ||
Sbjct 212028 TAAACCAGGCATTAAACCTCTCTTTTTCAACCAAAATATGGCAGCAAATGATCCAGAGAA 212087
Query 19077 GAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATT 19136
|||| |||||| | | |||||||||||||| || ||| ||| | || |||| |
Sbjct 212088 AAATACACCTTCAATAGTTGCAAAAGCAACTAATCGTTCCCCAAATAATGCTTCATCGTC 212147
Query 19137 ATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGA 19196
| ||||||||||| | ||| |||||||||| ||| | |||||| || | | || |
Sbjct 212148 GTTAATCCATTTCAAAGTCCAGTCAGCCTTCTGTTTGATACATGGGATGTTGACAATTGC 212207
Query 19197 ATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTA 19256
||||| ||| | ||| | ||| ||| || | ||||| | || | |||
Sbjct 212208 ATTAAGAAGAAAGTCTTTTTCAATAGGGTCTCTAATGTAAGTATCTAACTGTACAGAGTA 212267
Query 19257 CATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGT 19316
|||| ||||| ||||||||| | ||||| || || || |||| | | ||||| |
Sbjct 212268 AGTTTCAGAATGTATATTTTCTGTCATGATCTGGAACCCATAGAAACTTTTGGCTTCAGG 212327
Query 19317 TATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGC 19376
|| || || || |||| | || || |||||||||||||| | |||||| ||
Sbjct 212328 AATTTGAACCTCTGCTGAAAAGTTCTCAACTAAATTTTCATTAACAAGACCATCAGATGC 212387
Query 19377 TGCAAAAAATGCTAATACATGTTTA-ATAAAATGTTTTTCATCTGAGGTTAA---TGTAT 19432
||||||||| || ||||| | || | ||||| | | |||| | | |||| || |
Sbjct 212388 TGCAAAAAAAGCCAATAC-TCTTGAGATAAAGAATCTCTCATTTTCGTTTAACTTAGTGT 212446
Query 19433 TCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTC-T 19491
||| ||| ||||| |||| | ||| | ||| || ||||| || |||||||| |
Sbjct 212447 CCCAGTCAGGTATATCCTTAGCAAGATCAATTTCCTCTGTAGTCCAGAAGGAAGCCTCGT 212506
Query 19492 GCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTT 19551
|| || || ||||| | ||| || |||| ||||| || ||||| ||||||||||| |
Sbjct 212507 GC-TTCTTGTACATTTGCCAAATTTCACCATATTTAATTGGAAACATAACAAATCTGCGT 212565
Query 19552 TTATTTTCTTTAAGAATAGGTTC 19574
|| ||||| || |||| |||||
Sbjct 212566 TTGTTTTCCTTGAGAAGTGGTTC 212588
Score = 360 bits (398), Expect = 2e-94
Identities = 628/911 (69%), Gaps = 7/911 (1%)
Strand=Plus/Minus
Query 18669 TTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACA 18728
||||||||| || | |||||| || || || || || || || || ||||||| |||
Sbjct 578597 TTTTTGATAATCAGAAACTCTCTTCTCGAAAAAGTTTGTCTTACCAGCTAATGAAATATT 578538
Query 18729 TTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAG 18788
||||| || ||||||||||| | ||||| || || || ||| |||| | | ||
Sbjct 578537 CTCCATGAAGTCAAATGGATTAGTAACATTGTAAATCTTCTTGTTACCTAGAGCAACTAA 578478
Query 18789 TAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAA 18848
|| | ||| || ||| ||| || |||| ||||| || |||||||| || | |||
Sbjct 578477 AAGACGATCGGCAACATATTCAACATATTGACACATCAAATTGCAATTCATACCAAGTAA 578418
Query 18849 TTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAAT 18908
| | || || |||||||||| |||| | || ||| |||| ||||||| || ||
Sbjct 578417 TGAGGCTGGAAGAGCATCTGTAAAGTATTCCTTCTCAATAGTTACAGCCTCTGTAATTAT 578358
Query 18909 AGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAA 18968
| |||| || | || || | | | ||| ||| | || || |||||
Sbjct 578357 CTTTTCAACAATAATTGGATCGGGTCTATTTTCCAAATGGGAAAATAATAAGCAAGCAAA 578298
Query 18969 ATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCAT 19028
|||| || || || || || | || ||||||||||||||||| || | || |||||
Sbjct 578297 ATCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTAGAAAAAGTAAGGCCTGGCAT 578238
Query 19029 CAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTC 19088
| ||||| |||||||||||||| ||||| || || || ||||| || || ||||||||
Sbjct 578237 TAAACCTCTCTTTTTTAACCAGAAAATAGATGCGAAAGAACCAGAGAAAAAAATACCTTC 578178
Query 19089 TACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTT 19148
|| || || |||||||| || | ||| || | || || |||| | ||||||| |
Sbjct 578177 AACAGCAGCGAAAGCAACAAGACGTTCAGCAAATAATGCTTCCTTATCACTAATCCATCT 578118
Query 19149 CAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATA 19208
| |||||||| |||||||| || | ||| || | | || |||| ||| |||| | |
Sbjct 578117 TAAAGCCCAATCTGCCTTCTTCTTAATACAAGGAACATTTTCAATAGCATTGAATAAAAA 578058
Query 19209 CATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCT--GAA 19266
|||||| | | |||||||| ||||| || || ||| | || | || ||| ||
Sbjct 578057 TTCACGCTCTTTAGAATCTTTAATATATGTGTCAATTAAT--AGTGAATATGTCTCAGAG 578000
Query 19267 TGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACT 19326
|| |||||||| || || || || || ||||| || | ||||||| | | || ||
Sbjct 577999 TGTATATTTTCCATCATGATTTGGAAACCATAAAAGCACTTAGCTTCTGGTGTTTGAACC 577940
Query 19327 TCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAAT 19386
||| |||| |||| || |||||||| ||||| || ||||| ||| || |||||
Sbjct 577939 TCAGCCGAAAAGTTTTCAACTAAATTTTCGTTAACAATACCATCTGAAGCAGCGAAAAAG 577880
Query 19387 GCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATT---CCAATCATTA 19443
||||| || || ||||||| |||||| | | |||| ||||||| |
Sbjct 577879 GCTAAGACGCGTGAAATAAAAAAACGCTCATCTTTATTAAGCTTATTTTCCCAATCACCA 577820
Query 19444 ATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATAC 19503
||||||||| |||||| | ||||||| | ||||| ||||| || || || |||||||||
Sbjct 577819 ATATCTTTACTTAAATCAATTTCTTCAGCAGTCCAGAAAGATGCTTCAGCCTTTTTATAC 577760
Query 19504 ATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTCTTTA 19563
|| | ||| || || | | | || || || | |||||||| |||||||||| |
Sbjct 577759 ATTTGCCAGATCTCGTGGAACTTAATTGGGAAGAGGACAAATCTTCTTTTATTTTCCATT 577700
Query 19564 AGAATAGGTTC 19574
| ||| |||||
Sbjct 577699 AAAATGGGTTC 577689
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562107844415040
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