Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq14 324 2e-83
>seq14
Length=670130
Score = 324 bits (358), Expect = 2e-83
Identities = 595/866 (69%), Gaps = 31/866 (4%)
Strand=Plus/Minus
Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTT 36930
|||||| || ||||||||| || ||||| |||| |||||||| |||||||| ||
Sbjct 578609 CATAACACCGGCTTTTTGATAATCAGAAACTC-TCTTCTCGAAAAAGTTTGTCTTACCAG 578551
Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATG 36990
||| ||| ||||| ||||| || ||||||||||||| ||| || || || | ||
Sbjct 578550 CTAATGAAATATTCTCCATGAAGTCAAATGGATTAGTAACATTGTAAAT----CTTCTTG 578495
Query 36991 ATAATTCCTTCAG-------AAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGT 37043
|| ||| || ||| | ||| |||||| |||| | |||| |||||| |
Sbjct 578494 TTA---CCTAGAGCAACTAAAAGACGATCGGCAACATATTCAACATATTGACACATCAAA 578438
Query 37044 TCATAGTTTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATT 37103
| | || ||||||| || | |||||| |||||| || || || || ||
Sbjct 578437 TTGCAATTCATACCAAGTAATGAGGCTGGAAGAGCATCTGTAAAGTATTCCTTCTCAATA 578378
Query 37104 ATTACAGCATCTTTAACTATATT---AACAATAACTTCTTCAGTTGGGGGATATTTT--A 37158
||||||| ||| ||| ||| || |||||||| | || ||| |||||| |
Sbjct 578377 GTTACAGCCTCTGTAATTATCTTTTCAACAATAATTGGATC-----GGGTCTATTTTCCA 578323
Query 37159 AATATTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATT 37218
||| ||| ||||| || ||||||||| || | ||||||||| | || |||||||
Sbjct 578322 AATGGGAAAATAATAAGCAAGCAAAATCAGTGTGAAGACCTTCATCACGACAGATCAATT 578263
Query 37219 CATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAA 37278
|||||||||| || | ||||||||||||||||| ||||| | ||| || || | ||| |
Sbjct 578262 CATTAGAAAAAGTAAGGCCTGGCATTAAACCTCTCTTTTTTAACCAGAAAATAGATGCGA 578203
Query 37279 AAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAG 37338
|||| ||||| || |||||||||||||| || || || || ||||||||| | | ||
Sbjct 578202 AAGAACCAGAGAAAAAAATACCTTCAACAGCAGCGAAAGCAACAAGACGTTCAGCAAATA 578143
Query 37339 TTGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAA 37398
|| | |||| ||||||| || | |||||||||||| |||| ||| ||
Sbjct 578142 ATGCTTCCTTATCACTAATCCATCTTAAAGCCCAATCTGCCTTCTTCTTAATACAAGGAA 578083
Query 37399 TTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAA 37458
||||||| || || || | ||| | |||| | |||| | ||||| || ||||
Sbjct 578082 CATTTTCAATAGCATTGAATAAAAATTCACGCTCTTTAGAATCTTTAATATATGTGTCAA 578023
Query 37459 TTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAAC 37518
||| || ||| | |||||||| |||||||| || || || ||||||||||| |
Sbjct 578022 TTAATAGTGAATATGTCTCAGAGTGTATATTTTCCATCATGATTTGGAAACCATAAAAGC 577963
Query 37519 ACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTA 37578
|| ||||||| | | |||||| || |||| | | | |||| ||||| ||||| |
Sbjct 577962 ACTTAGCTTCTGGTGTTTGAACCTCAGCCGAAAAGTTTTCAACTAAATTTTCGTTAACAA 577903
Query 37579 TCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTG 37638
| ||||| ||| || || || || | || | |||||| | ||||| |||
Sbjct 577902 TACCATCTGAAGCAGCGAAAAAGGCTAAGACGCGTGAAATAAAAAAACGCTCATC-TTTA 577844
Query 37639 ATAA----TTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAA 37694
||| |||| ||||||| ||||||||| |||||||| ||| ||| | |||||
Sbjct 577843 TTAAGCTTATTTTCCCAATCACCAATATCTTTACTTAAATCAATTTCTTCAGCAGTCCAG 577784
Query 37695 AAACTTGCCAATGCACGTTTATACAT 37720
||| ||| || |||||||||
Sbjct 577783 AAAGATGCTTCAGCCTTTTTATACAT 577758
Score = 275 bits (304), Expect = 7e-69
Identities = 504/737 (68%), Gaps = 10/737 (1%)
Strand=Plus/Plus
Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931
|||||| || | |||||||| ||| ||||| |||| || ||||| ||||| || |
Sbjct 211668 CATAACACCTGTCTTTTGATAATCTGAAACTCTCTTTTCAAAGAAATTAGTCTTACCAAC 211727
Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGA 36991
|| || |||||||||||||| || || ||||| | | || ||| | | || |
Sbjct 211728 AAGAGAAATATTTTCCATAAAGTCGAAAGGATTTGTAGCATCATAAACCTTTTTATTTCC 211787
Query 36992 TAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTT 37051
|| | || | ||||| |||||| |||| ||||||| |||||| | || | ||
Sbjct 211788 CAAAGCAACGAGCAATCTATCAGCAACATATTCAATGTATTGACACATCAAGTCGCAATT 211847
Query 37052 TATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGC 37111
||||||| || | || |||| || || || || |||||| || | |||||
Sbjct 211848 CATACCAAGTAATGAGACAGGAAGAGCCTCGGTAAAGTATTCTTTTTCAATCACAACAGC 211907
Query 37112 ATCTTTAACTATATTA---ACAATAACTTCTTCAGTTGGGGGATATTTT--AAATATTTA 37166
|| | || || || |||||| || |||| | |||||| || |
Sbjct 211908 TTCAGTGACAATTTTCTCGACAATAGCTGGATCAGGTT-----TATTTTGCAAGTGAGCG 211962
Query 37167 AACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAA 37226
|| ||||||||| ||||||| ||||| ||||||||||| || || | ||||||||||
Sbjct 211963 AATAATAAACATCCAAAATCTGTATGTAGACCTTCATCTCGACAGATAAGTTCATTAGAA 212022
Query 37227 AAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCA 37286
|||||||| || |||||||||||||| ||||| | ||||||||| || ||||| ||||||
Sbjct 212023 AAGGTTAAACCAGGCATTAAACCTCTCTTTTTCAACCAAAATATGGCAGCAAATGATCCA 212082
Query 37287 GAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA 37346
|| || || | |||||||| | |||||| || || | ||| || || || |
Sbjct 212083 GAGAAAAATACACCTTCAATAGTTGCAAAAGCAACTAATCGTTCCCCAAATAATGCTTCA 212142
Query 37347 TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCA 37406
| || ||||||||| ||||| || ||||| ||| | |||| || | ||
Sbjct 212143 TCGTCGTTAATCCATTTCAAAGTCCAGTCAGCCTTCTGTTTGATACATGGGATGTTGACA 212202
Query 37407 ATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAA 37466
||||| || | ||||||| |||||| | ||| | || |||||||| | ||| |
Sbjct 212203 ATTGCATTAAGAAGAAAGTCTTTTTCAATAGGGTCTCTAATGTAAGTATCTAACTGTACA 212262
Query 37467 CTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCT 37526
|| ||||||| || |||||||| | ||||| || ||||| |||| | |||
Sbjct 212263 GAGTAAGTTTCAGAATGTATATTTTCTGTCATGATCTGGAACCCATAGAAACTTTTGGCT 212322
Query 37527 TCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCA 37586
|||| | |||||| || |||| ||| | |||| ||||||||||| | ||||||
Sbjct 212323 TCAGGAATTTGAACCTCTGCTGAAAAGTTCTCAACTAAATTTTCATTAACAAGACCATCA 212382
Query 37587 CTAGCTGCAAAGAAAGC 37603
|||||||| |||||
Sbjct 212383 GATGCTGCAAAAAAAGC 212399
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592315793061440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |