Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq14 324 2e-83 >seq14 Length=670130 Score = 324 bits (358), Expect = 2e-83 Identities = 595/866 (69%), Gaps = 31/866 (4%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTT 36930 |||||| || ||||||||| || ||||| |||| |||||||| |||||||| || Sbjct 578609 CATAACACCGGCTTTTTGATAATCAGAAACTC-TCTTCTCGAAAAAGTTTGTCTTACCAG 578551 Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATG 36990 ||| ||| ||||| ||||| || ||||||||||||| ||| || || || | || Sbjct 578550 CTAATGAAATATTCTCCATGAAGTCAAATGGATTAGTAACATTGTAAAT----CTTCTTG 578495 Query 36991 ATAATTCCTTCAG-------AAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGT 37043 || ||| || ||| | ||| |||||| |||| | |||| |||||| | Sbjct 578494 TTA---CCTAGAGCAACTAAAAGACGATCGGCAACATATTCAACATATTGACACATCAAA 578438 Query 37044 TCATAGTTTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATT 37103 | | || ||||||| || | |||||| |||||| || || || || || Sbjct 578437 TTGCAATTCATACCAAGTAATGAGGCTGGAAGAGCATCTGTAAAGTATTCCTTCTCAATA 578378 Query 37104 ATTACAGCATCTTTAACTATATT---AACAATAACTTCTTCAGTTGGGGGATATTTT--A 37158 ||||||| ||| ||| ||| || |||||||| | || ||| |||||| | Sbjct 578377 GTTACAGCCTCTGTAATTATCTTTTCAACAATAATTGGATC-----GGGTCTATTTTCCA 578323 Query 37159 AATATTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATT 37218 ||| ||| ||||| || ||||||||| || | ||||||||| | || ||||||| Sbjct 578322 AATGGGAAAATAATAAGCAAGCAAAATCAGTGTGAAGACCTTCATCACGACAGATCAATT 578263 Query 37219 CATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAA 37278 |||||||||| || | ||||||||||||||||| ||||| | ||| || || | ||| | Sbjct 578262 CATTAGAAAAAGTAAGGCCTGGCATTAAACCTCTCTTTTTTAACCAGAAAATAGATGCGA 578203 Query 37279 AAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAG 37338 |||| ||||| || |||||||||||||| || || || || ||||||||| | | || Sbjct 578202 AAGAACCAGAGAAAAAAATACCTTCAACAGCAGCGAAAGCAACAAGACGTTCAGCAAATA 578143 Query 37339 TTGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAA 37398 || | |||| ||||||| || | |||||||||||| |||| ||| || Sbjct 578142 ATGCTTCCTTATCACTAATCCATCTTAAAGCCCAATCTGCCTTCTTCTTAATACAAGGAA 578083 Query 37399 TTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAA 37458 ||||||| || || || | ||| | |||| | |||| | ||||| || |||| Sbjct 578082 CATTTTCAATAGCATTGAATAAAAATTCACGCTCTTTAGAATCTTTAATATATGTGTCAA 578023 Query 37459 TTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAAC 37518 ||| || ||| | |||||||| |||||||| || || || ||||||||||| | Sbjct 578022 TTAATAGTGAATATGTCTCAGAGTGTATATTTTCCATCATGATTTGGAAACCATAAAAGC 577963 Query 37519 ACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTA 37578 || ||||||| | | |||||| || |||| | | | |||| ||||| ||||| | Sbjct 577962 ACTTAGCTTCTGGTGTTTGAACCTCAGCCGAAAAGTTTTCAACTAAATTTTCGTTAACAA 577903 Query 37579 TCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTG 37638 | ||||| ||| || || || || | || | |||||| | ||||| ||| Sbjct 577902 TACCATCTGAAGCAGCGAAAAAGGCTAAGACGCGTGAAATAAAAAAACGCTCATC-TTTA 577844 Query 37639 ATAA----TTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAA 37694 ||| |||| ||||||| ||||||||| |||||||| ||| ||| | ||||| Sbjct 577843 TTAAGCTTATTTTCCCAATCACCAATATCTTTACTTAAATCAATTTCTTCAGCAGTCCAG 577784 Query 37695 AAACTTGCCAATGCACGTTTATACAT 37720 ||| ||| || ||||||||| Sbjct 577783 AAAGATGCTTCAGCCTTTTTATACAT 577758 Score = 275 bits (304), Expect = 7e-69 Identities = 504/737 (68%), Gaps = 10/737 (1%) Strand=Plus/Plus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 |||||| || | |||||||| ||| ||||| |||| || ||||| ||||| || | Sbjct 211668 CATAACACCTGTCTTTTGATAATCTGAAACTCTCTTTTCAAAGAAATTAGTCTTACCAAC 211727 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGA 36991 || || |||||||||||||| || || ||||| | | || ||| | | || | Sbjct 211728 AAGAGAAATATTTTCCATAAAGTCGAAAGGATTTGTAGCATCATAAACCTTTTTATTTCC 211787 Query 36992 TAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTT 37051 || | || | ||||| |||||| |||| ||||||| |||||| | || | || Sbjct 211788 CAAAGCAACGAGCAATCTATCAGCAACATATTCAATGTATTGACACATCAAGTCGCAATT 211847 Query 37052 TATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGC 37111 ||||||| || | || |||| || || || || |||||| || | ||||| Sbjct 211848 CATACCAAGTAATGAGACAGGAAGAGCCTCGGTAAAGTATTCTTTTTCAATCACAACAGC 211907 Query 37112 ATCTTTAACTATATTA---ACAATAACTTCTTCAGTTGGGGGATATTTT--AAATATTTA 37166 || | || || || |||||| || |||| | |||||| || | Sbjct 211908 TTCAGTGACAATTTTCTCGACAATAGCTGGATCAGGTT-----TATTTTGCAAGTGAGCG 211962 Query 37167 AACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAA 37226 || ||||||||| ||||||| ||||| ||||||||||| || || | |||||||||| Sbjct 211963 AATAATAAACATCCAAAATCTGTATGTAGACCTTCATCTCGACAGATAAGTTCATTAGAA 212022 Query 37227 AAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCA 37286 |||||||| || |||||||||||||| ||||| | ||||||||| || ||||| |||||| Sbjct 212023 AAGGTTAAACCAGGCATTAAACCTCTCTTTTTCAACCAAAATATGGCAGCAAATGATCCA 212082 Query 37287 GAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA 37346 || || || | |||||||| | |||||| || || | ||| || || || | Sbjct 212083 GAGAAAAATACACCTTCAATAGTTGCAAAAGCAACTAATCGTTCCCCAAATAATGCTTCA 212142 Query 37347 TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCA 37406 | || ||||||||| ||||| || ||||| ||| | |||| || | || Sbjct 212143 TCGTCGTTAATCCATTTCAAAGTCCAGTCAGCCTTCTGTTTGATACATGGGATGTTGACA 212202 Query 37407 ATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAA 37466 ||||| || | ||||||| |||||| | ||| | || |||||||| | ||| | Sbjct 212203 ATTGCATTAAGAAGAAAGTCTTTTTCAATAGGGTCTCTAATGTAAGTATCTAACTGTACA 212262 Query 37467 CTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCT 37526 || ||||||| || |||||||| | ||||| || ||||| |||| | ||| Sbjct 212263 GAGTAAGTTTCAGAATGTATATTTTCTGTCATGATCTGGAACCCATAGAAACTTTTGGCT 212322 Query 37527 TCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCA 37586 |||| | |||||| || |||| ||| | |||| ||||||||||| | |||||| Sbjct 212323 TCAGGAATTTGAACCTCTGCTGAAAAGTTCTCAACTAAATTTTCATTAACAAGACCATCA 212382 Query 37587 CTAGCTGCAAAGAAAGC 37603 |||||||| ||||| Sbjct 212383 GATGCTGCAAAAAAAGC 212399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592315793061440