Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq12 158 1e-33
seq8 140 3e-28
seq5 125 6e-24
>seq12
Length=712717
Score = 158 bits (174), Expect = 1e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| || | | ||| ||||| | || ||||| ||||| || ||||| || |
Sbjct 150925 CCACCTCTCAATCTGAGAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAGTCAGAT 150984
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | |||| |||||||||||||| ||||| |||||||| |||||||| || |||
Sbjct 150985 AAGGTACGGCCATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGA 151044
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| || || ||||||||||| ||| ||| ||| | || | ||||||||| | || ||
Sbjct 151045 ATTCCCTCCTTATCTTGAATCTTTGATTTGACATTATCAATAGTGTCAGATGACTCAACC 151104
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|||||||| | || || || || | ||||| ||||| ||||||||
Sbjct 151105 TCAAGAGTAATTGTCTTCCCTGTAAGGGTTTTAACAAAAATCTGCAT 151151
>seq8
Length=1087023
Score = 140 bits (154), Expect = 3e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| |||||||| | ||||| ||||| | || ||||| ||||| || ||||| || |
Sbjct 676686 CCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGAT 676745
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | || || ||||| ||||| ||||| || || | ||||| || || |||
Sbjct 676746 AAGGTACGTCCGTCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGA 676805
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| ||||| || |||||||||||| || ||| | || | ||||||||| | ||| ||
Sbjct 676806 ATTCCTTCCTTGTCTTGAATTTTTGACTTAACATTGTCAATAGTGTCAGAGGATTCAACC 676865
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472
|| ||||| | ||||| ||||| || ||||| || || |||||||| ||
Sbjct 676866 TCGAGAGTAATGGTTTTACCGGTCAAGGTTTTGACGAAGATCTGCATTGT 676915
>seq5
Length=1301127
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| |||||||| | ||||| ||||| | || ||||| ||||| || |||||||| |
Sbjct 1173646 CCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAATCAGAT 1173705
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||| | |||| || ||||||||||| ||||| || ||||| ||||| || || ||
Sbjct 1173706 AAAGTACGTCCATCTTCTAATTGCTTACCAGCAAAGATTAAACGTTGTTGGTCTGGAGGG 1173765
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| ||||| || || || || ||| || ||| | || | ||| || || | || ||
Sbjct 1173766 ATTCCTTCCTTGTCCTGGATCTTTGACTTAACATTGTCAATAGTATCGGATGACTCTACC 1173825
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || || | || || ||||| | ||||| ||||| ||||||||
Sbjct 1173826 TCGAGGGTAATAGTCTTACCGGTAAGGGTTTTGACAAAAATCTGCAT 1173872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396277743168552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |