Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq12 116 3e-21 seq8 109 4e-19 seq5 102 6e-17 seq21 96.9 3e-15 >seq12 Length=712717 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||||| || || ||||| || ||||| ||||||| | || | || ||| Sbjct 150943 ACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAGTCAGATAAGGTACGGCCATCTTCC 151002 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 || |||||||| ||||| |||| || |||||||| | |||| |||||||| || | Sbjct 151003 AATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATTCCCTCCTTATCTTGA 151062 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 |||||| ||| ||| | | | || || || | ||| ||||| | ||||| || || Sbjct 151063 ATCTTTGATTTGACATTATCAATAGTGTCAGATGACTCAACCTCAAGAGTAATTGTCTTC 151122 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | ||||| |||||||||||||| Sbjct 151123 CCTGTAAGGGTTTTAACAAAAATCTGCAT 151151 >seq8 Length=1087023 Score = 109 bits (120), Expect = 4e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || |||| | ||| |||||||||| ||| || |||||||| ||||| |||||| Sbjct 676686 CCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGAT 676745 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | || |||| || || || ||||||||||| || | || ||||| || | ||| Sbjct 676746 AAGGTACGTCCGTCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGA 676805 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || |||||||| ||| ||| || ||| | | || || || | || ||| Sbjct 676806 ATTCCTTCCTTGTCTTGAATTTTTGACTTAACATTGTCAATAGTGTCAGAGGATTCAACC 676865 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGT 48769 || | ||||| ||||| || ||||| ||||| || || |||||||| || Sbjct 676866 TCGAGAGTAATGGTTTTACCGGTCAAGGTTTTGACGAAGATCTGCATTGT 676915 >seq5 Length=1301127 Score = 102 bits (112), Expect = 6e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || |||| | ||| |||||||||| || || ||||| || |||||||||||| Sbjct 1173646 CCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAATCAGAT 1173705 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | | || | || || || |||||||| ||||| || | || ||||| || | || Sbjct 1173706 AAAGTACGTCCATCTTCTAATTGCTTACCAGCAAAGATTAAACGTTGTTGGTCTGGAGGG 1173765 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || |||||||| |||||| || ||| | | || || || | ||| ||| Sbjct 1173766 ATTCCTTCCTTGTCCTGGATCTTTGACTTAACATTGTCAATAGTATCGGATGACTCTACC 1173825 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 || | ||||| || || || || | ||||| ||||||||||||||| || Sbjct 1173826 TCGAGGGTAATAGTCTTACCGGTAAGGGTTTTGACAAAAATCTGCATCTTG 1173876 >seq21 Length=453462 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 48555 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCG 48614 || ||||| |||| || ||| ||||| || ||||||||||||| | | ||| | || Sbjct 371735 AAAACCAAGTGTAAGGTAGACTCCTTTTGGATGTTGTAATCAGATAAAGTACGACCATCT 371676 Query 48615 TCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCG 48674 || | || ||||| ||||| || | || |||||||| | ||||| || |||||||| Sbjct 371675 TCTAGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGGGGAATTCCTTCCTTGTCT 371616 Query 48675 CTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTT 48734 |||||| ||| ||| | | | | || | || ||||| | || || ||| Sbjct 371615 TGGATCTTTGATTTAACATTATCGATTGTATCACTGGATTCGACCTCAAGAGTGATGGTT 371556 Query 48735 TTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || ||||| | || || ||||||||||||||| Sbjct 371555 TTACCCGTTAGCGTCTTGACAAAAATCTGCATC 371523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380936968595928