Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq16 86.0 1e-11 >seq16 Length=634335 Score = 86.0 bits (94), Expect = 1e-11 Identities = 232/347 (67%), Gaps = 11/347 (3%) Strand=Plus/Plus Query 150307 AGAAGGTAAACTTGATCCACTAATTGGTCGCGAAACTGAACTT-GATGATCTAATTCAGA 150365 ||||||||| || || || | || ||||| || ||| | || ||| || || | Sbjct 210471 AGAAGGTAAGCTAGACCCTGTTATAGGTCGTGATGAAGAAATAAGAAGATGTA-TTAGGG 210529 Query 150366 TTCTTTCTCGTAAAACCAAAAAGAATGGTGCGTTAGTTGGTGAACCAGGTGTTGGTAAAA 150425 ||||| || | | ||| ||| || | ||| ||||||| || ||||||||||||| Sbjct 210530 TTCTTGCTAGAAGAACAAAATCAAACCCTTGTTTAATTGGTGATCCTGGTGTTGGTAAAA 210589 Query 150426 CACAAATCGTTGACGGATTAGCACAACGCATCGCTAATGGTGATGTTCCAGA--TTCTAT 150483 || ||| |||| || | || ||| | ||| | |||||||| ||||| | |||| | Sbjct 210590 CAAGTATCATTGAAGGTGTTGCCCAAAGAATCATTGATGGTGATATTCCAAATGTTCTTT 210649 Query 150484 GAAAGATGTTGAAATTCTT-TCTTTGAATATGGGTGCATTTACTGCTGGTACTAAGTATC 150542 || ||| ||| | || ||||| || | ||||| || | |||||| | || |||| Sbjct 210650 CCAA-TTGT--AAACTATTCGCTTTGGATTTAGGTGCCTTAAAAGCTGGTGCAAAATATC 210706 Query 150543 GTGGTGAATTCGAAGAACGTGTAGACAATTTGCTACAAGAACTAAAAGAACGCGATGAT- 150601 || ||||| |||||| | | | | | || ||||| | ||||| | ||| Sbjct 210707 AAGGAGAATTTGAAGAAAGAATTAAAGGTGTATTAAAAGAAATTGAAGAATCAAAGGATA 210766 Query 150602 --GTTATTCTGTTCATCGATGAAATCCATACTATTATGGGTGCTGGT 150646 ||||| | ||||| |||||||| || | | ||||||| |||| Sbjct 210767 TGATTATTTTATTCATTGATGAAATTCACATGTTAATGGGTGATGGT 210813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147588400323728