Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq1 372 2e-98 >seq1 Length=2214157 Score = 372 bits (412), Expect = 2e-98 Identities = 1143/1729 (66%), Gaps = 84/1729 (5%) Strand=Plus/Plus Query 24664 TGTAAATTGCTTAGCTGATACTGCTGGTTTAGTTCTAAGATAATACATTCCAGTTTTCAA 24723 ||||||||| |||| | || | || |||||| | |||||||||||||||||| || Sbjct 30732 TGTAAATTGTATAGCAGCAGAAGCAGCTTGAGTTCTTAAATAATACATTCCAGTTTTTAA 30791 Query 24724 TTTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTTTTGCAATGTTTGCTGATTCTAA 24783 || ||||| || ||||||||||| ||||| ||| | || ||| |||| | Sbjct 30792 ACCTTTTTTCCAGCCATAAAAATGCATACTTGTTAATTTCCCCATTGTTGGAGATTTAAT 30851 Query 24784 AAACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTTGTCTATCTGCAGCTAAGTCAAT 24843 | | | || | ||||| | ||| || |||| | ||| |||||||| ||||| Sbjct 30852 ATAAATATTAAGAGATTGTGATTGATCAATAAAAGCAGCACGATCAGCAGCTAAATCAAT 30911 Query 24844 GATCGTTTTCATCGATATATCGTAAGCTGTTTTGTATCTCTCTTTTATCTCAGTTGGAAT 24903 || ||||| |||| || || | ||||| ||| ||||| || | ||| || Sbjct 30912 AATTGTTTTTTGTGATAATTCCCAAACAGTTTTATATAAATCTTTAATTTTTTGTGGTAT 30971 Query 24904 ACTTGCAATATTTTGAACTGATCCATTTTCTCTCAATAGATTCAATCTCATATTCGGTG- 24962 || |||||| || ||||||||| || || |||| || | | | | ||| | Sbjct 30972 CAATGGGATATTTGCAATTGATCCATTATCACT-AATAATTTTACTTTTA-ATTGAATCA 31029 Query 24963 -TCCAAAGATTAATTTTTTCAAGATCTCTAATCAAGTGTTTATTTATGATAATAAATTCT 25021 |||| | | | | | | |||| | | || | ||| | || |||||| Sbjct 31030 TTCCATATACCTAAATCAACTAAATCTTTTAATAACCATGGATTAACAATTTGAAATTCA 31089 Query 25022 CCAGACAAAACTCTTCT--TATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCATTAT 25079 || | ||||||||||| ||| ||| |||||||| |||||||||||||||||||| Sbjct 31090 CCTGCTAAAACTCTTCTACTATAAATA--TTTGAAGTATATGGTTCAAAACATTCATTAA 31147 Query 25080 TTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTTCTCA 25139 ||| | ||||| || || ||||||||||||||| ||| | | || |||||||| | Sbjct 31148 ATCCAAGAATTTGTGATGTTGATGCTGTTGGCATTGGTGCAACAAGAAGTGAATTTCTTA 31207 Query 25140 AACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATCTAAATTATTATCTAACTCGA 25199 |||||||||| || | |||||| ||| ||||||||| || | | | | | Sbjct 31208 AACCATATTTTGACATTTTTTGTTTCAATAAATCCCAATCCCAA-----AGTTCAGTTGG 31262 Query 25200 TATCGTTATCAT---ATAAATCAAATTGTAACAATCCACTTGC--TGCAGGCGATTGATC 25254 | | | ||| |||||||| ||||||| ||| | |||| || || ||| || Sbjct 31263 T----TGAACATTCCATAAATCATATTGTAA-AATAC-CTTGAGATGTTGGTGATCCTTC 31316 Query 25255 AAAAGTTGAATATTTACCTTTTGTTATTGCCATATCTTTTGATTGCTCTAAC-GCAGCAT 25313 | ||||| |||| ||| | | |||| | || |||| ||| ||| ||||||| Sbjct 31317 ATAAGTTTCATATGGTCCTAATTCTTTTGCTAATTCACATGAT-GCTTCAACAGCAGCAT 31375 Query 25314 AATACATATTTTCAAAAATCGCTTTGTTTAAAAACTTAGCTTTTTCTCCATCGAAAGCAA 25373 ||| ||| ||||||| || ||||||| || ||||||| | ||| || | | Sbjct 31376 GATAAATAGTTTCAAATATTTGAATGTTTAATAATTTAGCTTCAGGTGAATCAAATGGTA 31435 Query 25374 TTTCCATTAAGGCG----AACGTATCTGCTAATCCCTGAACTCCTAATCCAACTGGACGA 25429 | ||| | || | ||| ||||| || ||||| ||||| ||| ||| | | Sbjct 31436 A----ACGAAGACACATAAAAGCATCAGCTAAACCTTGAACACCTAAAGCAATTGGTCTA 31491 Query 25430 TGTTTATTATT--ACTTATCTCAGTTTCTGATGTTGGATAGAAATTTGTATCGATCACAT 25487 ||| | |||| | || ||| | ||| |||||| |||| |||| || | | Sbjct 31492 TGTCTCATATTTGAATT-TCTT-GCTTCAATAACTGGATAATAATTCCTATCAATAATTT 31549 Query 25488 TATCTAGATTCTTTATGGCAAGCTTTGTGTATTTTC-TCAACTCAAT--AAAGTCAAAAT 25544 ||| || ||| | ||| |||| |||| | || | || | | ||| | |||| Sbjct 31550 TATTTAAATTACGAACAACAA-CTTT-TGTAATATCATGAAGTTTTTGAAAATTATAAAT 31607 Query 25545 --AAGGCTTATCGTTTATATCTCTTTTTACAAATTTAGATAAAGCGATTGATGCTAAATT 25602 || ||||| | ||||| | |||| | | ||| || | |||||||||||| Sbjct 31608 TGAAACGTTATCTTCAATATCAAT------AAATGTTGGTAATGCTAATGATGCTAAATT 31661 Query 25603 ACAAACAGCTTGTTCTTTCCCGT-CAGAATATTCATTGATCTCGATACATAAGTTGCTAG 25661 |||||||| ||| | | || ||||||||||| || || |||||| || | Sbjct 31662 GCAAACAGCAACTTCAT-CGGGTGCAGAATATTCAACAATTTCACAACATAAATTTGAAC 31720 Query 25662 ATTTGATTACTCCATAATTCTTTTGATTATTGCATGTATTGACAAT-ATCTTTATATCCT 25720 ||| ||| ||| ||| ||||||||| | | |||| ||| ||||||||| Sbjct 31721 TTTTTATTGTACCAAGATTTTTTTGATTACTTTTTTTATT-ACATGCATCTTTATAAAGC 31779 Query 25721 AAATATGGCGTTCCTGTTTCAATTTGAGATACTAAAATTTTCTCCCAAAGTTCTCTCGCT 25780 | | |||| | || ||||| |||| | | | |||||| | |||||||| | ||| Sbjct 31780 ATAAATGGAATACCAGTTTCTGTTTGTGCTTCCAAAATTGAATACCAAAGTTTTTGAGCT 31839 Query 25781 TTTACTTTCTTTACGAAGTTACCATCAGAAACAGCTCTTTCGTAAAGTTCAACAAATTCT 25840 || | | | || || ||||| || || | |||| || | | | ||||||| Sbjct 31840 TTAATTGTTTTAACAGCTTTACCTTCTTTTTCATATTTTTCATATAATGCTTCAAATTCA 31899 Query 25841 TGAT--TTATTTTCTCAGAGAAAAGTTTGCCATATTTATTGAGAATAATATTTGGACAGA 25898 | | | | ||| | ||| ||| | || | |||||| | | Sbjct 31900 TCACCATAAACATCTGAAAGA--------CCA--------GGGACTTC-ATTTGGGGAAA 31942 Query 25899 ATAAATGCCAATCAGCATTTTGCTCAACT-TTCTCCATAAATAAATCTGGAATCCACATT 25957 |||| ||| | | ||||||| |||||| ||||| ||||||||||| | |||||| | | Sbjct 31943 ATAATGACCATTGACCATTTTGTTCAACTCTTCTC-ATAAATAAATCAGAAATCCATAAT 32001 Query 25958 GCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAG 26017 || |||||||||||| ||||| ||||||||||| || ||||| ||| | | ||| | Sbjct 32002 GCTGCAAATAAATCTCTTGCTCTAATTTCTTCTTTACCATGATTTTTTCTAATATCAATA 32061 Query 26018 AAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTT 26077 ||||||||| ||| | ||||||||||| ||||| || |||||| ||| |||||| Sbjct 32062 TAATCAAAAACATCAGCATGCCATGGTTCCAAATACATTGCAAAAGCACCAGGTCTTTTA 32121 Query 26078 CCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAAT 26137 ||||||||||| || ||||||||||| | || ||||| |||||||||| |||| Sbjct 32122 TTACCACCTTGATCAACATATCTTGCAGTATTGTTAAAAACACGTAACATTGGAA-TAAT 32180 Query 26138 -CCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGC 26196 ||| | || || ||||| | ||| | || || || |||||||| ||| Sbjct 32181 ACCATTAGATGTACCATTTGTACCTGCAATATAAGAACCAGTACTTCTAATATTATGAAT 32240 Query 26197 ATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAA--TCTGAAACTGTATCG 26254 ||||| ||| ||||| ||||| |||||||||| |||||| | | ||| ||||| Sbjct 32241 ATGAAGACCAATTCCTCCAGCTGATTTTGAAATTAAAGCACAAGTTTTTAAA--GTATCA 32298 Query 26255 AAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAA-AAAACAAGAAGATAATTGCGA 26313 |||| |||| || ||| ||||||| | ||||| |||||||||||| | ||| | Sbjct 32299 TAAATACCTTCAATTGAATCTTCTTTCATAGC-AATAAGAAAACAAGAAGACATTTGTGG 32357 Query 26314 ATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATAT 26362 |||| || || | ||||||||| || || | ||||||||| ||||| Sbjct 32358 TTGAGGAGTACCAGCATTAAATAAAGTGGGAGAAGCATGAGTGAAATAT 32406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039580586200