Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq2 163 3e-35
>seq2
Length=1749581
Score = 163 bits (180), Expect = 3e-35
Identities = 464/697 (67%), Gaps = 26/697 (4%)
Strand=Plus/Minus
Query 138182 TACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATG 138241
||||| |||||| || | ||||| || ||||| || |||||||||||||| || || ||
Sbjct 140535 TACACAAATAGGGCCAATACCAGGGCCACCACCACCGTGTGGAATACAGAAAGTTTTGTG 140476
Query 138242 TAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGC 138301
| ||| | |||||| |||||||| || | |||| || | | || || ||||| ||
Sbjct 140475 GAGATTCAAATGACAAACATCTGCTCCTAAATCACCAGGACTAGTTAACCCAACCTGAGC 140416
Query 138302 ATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATAT 138361
|| | || |||||||| ||||| || || |||||||| || |||| || ||| |||
Sbjct 140415 GTTCATGTTAGCACCATCAAGATAAACTTGTCCACCATTCTCGTGAATGA-CTTCGATAG 140357
Query 138362 CTGT-CTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATG 138420
|| | ||||| | ||||||| ||||| || || ||||| |||| ||| ||||| |
Sbjct 140356 CTTTCCTGATACCAGGCTCAAATAAACCATATGTGGAGGGATAGGTAACCATCATACAAG 140297
Query 138421 AGAGTTCAAATGTATTCATGATT----GCTTTCTTCTCTAGATCTTTGATGTCTATGTTG 138476
|| | ||| |||| || ||||| || | |||| | ||||
Sbjct 140296 CAAG----ATTGTCGGCATGTTTCTTAGCTTTAGATTCCAAGTCTTCCAAATCTAAAGAA 140241
Query 138477 CCATCATCATCA-CACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGG 138535
|||| | || | || || ||| || || | | || ||||| | ||| ||| ||
Sbjct 140240 CCATTA-GATAAGCATTTAACAGGAACTACCGTAAGGCCCGCCATAGCAGCAGAAGCGGG 140182
Query 138536 ATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATCTCC-TGATC 138594
||| || || || |||||| | || || | ||| |||||||| ||| || || | | |
Sbjct 140181 ATTGGTACCGTGAGCTGACACAGGAATTAAACAGACATTTCTGTTAGATTCGCCATTAGC 140122
Query 138595 CTTGATGATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAG 138654
| | | ||| ||| ||| | || |||| ||| ||||| || | || | || |
Sbjct 140121 C-TCAAAATAGGCTCTGATGGTCCTGAGGCCTGTATATTCACCTTGAGCACCAGAATTCG 140063
Query 138655 GTTGTAATGATATAGAATCAAAACCTGTGATATCA--CATAACCATTTCTGTAAGTCATC 138712
| |||||| | | ||||| || || |||||| || | || |||| || | |
Sbjct 140062 GCATTAATGAAGTGGCGTCAAACCCAGTAATATCAGCCAAATCC--TTCTCAAA---AGC 140008
Query 138713 TATTATC--TTTTG-ATAACCCATGGTCTG-TATCATAGGTGTATGTGGATGCACGTTGG 138768
| ||| || || ||||| ||| || | || | |||| | ||||| | || |
Sbjct 140007 GGTAATCAGTTCTGTGTAACCTTCGGTTTGATTTCGT-GGTGCAAAAGGATGGATATTAG 139949
Query 138769 CAAATTCTTCCCATGACACAGGCATCAGTTCTGCTGCTGCATTTAGTTTCATTGTGCAAC 138828
||||||| ||||| | || |||| || | | |||||| ||||||||||||||
Sbjct 139948 CAAATTCAGGCCATGTAATTGGAATCATCTCAACAGTTGCATTGAGTTTCATTGTGCAGG 139889
Query 138829 TACCAAGTGGAACCATACCATTTACTAATGAGAAATC 138865
||||||||||| ||||| || | | ||| |||||
Sbjct 139888 AACCAAGTGGAATCATACTATCGGCAAGTGATAAATC 139852
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578997415702720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |