Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq2 163 3e-35 >seq2 Length=1749581 Score = 163 bits (180), Expect = 3e-35 Identities = 464/697 (67%), Gaps = 26/697 (4%) Strand=Plus/Minus Query 138182 TACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATG 138241 ||||| |||||| || | ||||| || ||||| || |||||||||||||| || || || Sbjct 140535 TACACAAATAGGGCCAATACCAGGGCCACCACCACCGTGTGGAATACAGAAAGTTTTGTG 140476 Query 138242 TAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGC 138301 | ||| | |||||| |||||||| || | |||| || | | || || ||||| || Sbjct 140475 GAGATTCAAATGACAAACATCTGCTCCTAAATCACCAGGACTAGTTAACCCAACCTGAGC 140416 Query 138302 ATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATAT 138361 || | || |||||||| ||||| || || |||||||| || |||| || ||| ||| Sbjct 140415 GTTCATGTTAGCACCATCAAGATAAACTTGTCCACCATTCTCGTGAATGA-CTTCGATAG 140357 Query 138362 CTGT-CTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATG 138420 || | ||||| | ||||||| ||||| || || ||||| |||| ||| ||||| | Sbjct 140356 CTTTCCTGATACCAGGCTCAAATAAACCATATGTGGAGGGATAGGTAACCATCATACAAG 140297 Query 138421 AGAGTTCAAATGTATTCATGATT----GCTTTCTTCTCTAGATCTTTGATGTCTATGTTG 138476 || | ||| |||| || ||||| || | |||| | |||| Sbjct 140296 CAAG----ATTGTCGGCATGTTTCTTAGCTTTAGATTCCAAGTCTTCCAAATCTAAAGAA 140241 Query 138477 CCATCATCATCA-CACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGG 138535 |||| | || | || || ||| || || | | || ||||| | ||| ||| || Sbjct 140240 CCATTA-GATAAGCATTTAACAGGAACTACCGTAAGGCCCGCCATAGCAGCAGAAGCGGG 140182 Query 138536 ATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATCTCC-TGATC 138594 ||| || || || |||||| | || || | ||| |||||||| ||| || || | | | Sbjct 140181 ATTGGTACCGTGAGCTGACACAGGAATTAAACAGACATTTCTGTTAGATTCGCCATTAGC 140122 Query 138595 CTTGATGATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAG 138654 | | | ||| ||| ||| | || |||| ||| ||||| || | || | || | Sbjct 140121 C-TCAAAATAGGCTCTGATGGTCCTGAGGCCTGTATATTCACCTTGAGCACCAGAATTCG 140063 Query 138655 GTTGTAATGATATAGAATCAAAACCTGTGATATCA--CATAACCATTTCTGTAAGTCATC 138712 | |||||| | | ||||| || || |||||| || | || |||| || | | Sbjct 140062 GCATTAATGAAGTGGCGTCAAACCCAGTAATATCAGCCAAATCC--TTCTCAAA---AGC 140008 Query 138713 TATTATC--TTTTG-ATAACCCATGGTCTG-TATCATAGGTGTATGTGGATGCACGTTGG 138768 | ||| || || ||||| ||| || | || | |||| | ||||| | || | Sbjct 140007 GGTAATCAGTTCTGTGTAACCTTCGGTTTGATTTCGT-GGTGCAAAAGGATGGATATTAG 139949 Query 138769 CAAATTCTTCCCATGACACAGGCATCAGTTCTGCTGCTGCATTTAGTTTCATTGTGCAAC 138828 ||||||| ||||| | || |||| || | | |||||| |||||||||||||| Sbjct 139948 CAAATTCAGGCCATGTAATTGGAATCATCTCAACAGTTGCATTGAGTTTCATTGTGCAGG 139889 Query 138829 TACCAAGTGGAACCATACCATTTACTAATGAGAAATC 138865 ||||||||||| ||||| || | | ||| ||||| Sbjct 139888 AACCAAGTGGAATCATACTATCGGCAAGTGATAAATC 139852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578997415702720