Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq12 152 9e-32
seq8 152 9e-32
seq21 136 7e-27
seq5 131 3e-25
seq9 109 1e-18
>seq12
Length=712717
Score = 152 bits (168), Expect = 9e-32
Identities = 174/234 (74%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||||||||||| || |||| ||| || || | || || || || ||||| ||
Sbjct 150924 ACCACCTCTCAATCTGAGAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAGTCAGA 150983
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
||| || | ||| || ||||| || || |||||||| || | |||||||| |||||
Sbjct 150984 TAAGGTACGGCCATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGG 151043
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
||||| || |||||||| || || | ||| | ||| |||||| || || ||||||||
Sbjct 151044 AATTCCCTCCTTATCTTGAATCTTTGATTTGACATTATCAATAGTGTCAGATGACTCAAC 151103
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTATT 193366
|| ||||| || || || ||||| || ||||| ||||| || |||||||| ||
Sbjct 151104 CTCAAGAGTAATTGTCTTCCCTGTAAGGGTTTTAACAAAAATCTGCATTTTTTT 151157
>seq8
Length=1087023
Score = 152 bits (168), Expect = 9e-32
Identities = 174/234 (74%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| |||| | |||| ||| || || | || || ||| || |||||
Sbjct 676683 ATACCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCA 676742
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
||||| || | || ||||||||||| |||||||| |||||||| ||||| || |||
Sbjct 676743 GATAAGGTACGTCCGTCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGA 676802
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| |||||||| || ||||| ||||| | || | ||| |||||| || || || |||
Sbjct 676803 GGAATTCCTTCCTTGTCTTGAATTTTTGACTTAACATTGTCAATAGTGTCAGAGGATTCA 676862
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTA 193364
|| || ||||| || |||||||| || | ||||| || || || |||||| ||
Sbjct 676863 ACCTCGAGAGTAATGGTTTTACCGGTCAAGGTTTTGACGAAGATCTGCATTGTA 676916
>seq21
Length=453462
Score = 136 bits (150), Expect = 7e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| |||| | |||| || || |||| ||| || || || || ||
Sbjct 371753 ATACCACCTCTTAATCTTAAAACCAAGTGTAAGGTAGACTCCTTTTGGATGTTGTAATCA 371694
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
||||| || | | ||| |||| |||||| || ||||||||||| | |||||||| ||
Sbjct 371693 GATAAAGTACGACCATCTTCTAGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGG 371634
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| |||||||| || ||||| || || | ||| | ||| || ||||| || ||
Sbjct 371633 GGAATTCCTTCCTTGTCTTGGATCTTTGATTTAACATTATCGATTGTATCACTGGATTCG 371574
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| || |||||||| |||||||| || ||||| || |||||
Sbjct 371573 ACCTCAAGAGTGATGGTTTTACCCGTTAGCGTCTTGACAAAAATCTGCAT 371524
>seq5
Length=1301127
Score = 131 bits (144), Expect = 3e-25
Identities = 176/245 (72%), Gaps = 4/245 (2%)
Strand=Plus/Plus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
||||||||| |||| | |||| ||| || || | || || || || || || ||
Sbjct 1173645 ACCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAATCAGA 1173704
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
||| || | ||| |||||||| || || ||||| ||||| | ||||| || |||||
Sbjct 1173705 TAAAGTACGTCCATCTTCTAATTGCTTACCAGCAAAGATTAAACGTTGTTGGTCTGGAGG 1173764
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|||||||| || || || || || | || | ||| |||||||||||| ||||| ||
Sbjct 1173765 GATTCCTTCCTTGTCCTGGATCTTTGACTTAACATTGTCAATAGTATCGGATGACTCTAC 1173824
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT----ATTAG 193368
|| || || ||||| ||||| || || ||||| ||||| || ||||| || ||| |
Sbjct 1173825 CTCGAGGGTAATAGTCTTACCGGTAAGGGTTTTGACAAAAATCTGCATCTTGGTGATTTG 1173884
Query 193369 TAAAA 193373
|||||
Sbjct 1173885 TAAAA 1173889
>seq9
Length=949999
Score = 109 bits (120), Expect = 1e-18
Identities = 95/118 (81%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| || || |||||||| ||||| || ||||||| ||| | || ||||||||||||
Sbjct 831606 TCTGGGGGAATTCCTTCCTTATCCTGAATTTTGGATTTGACGTTGTCAATAGTATCGGAT 831665
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTT 193362
|| |||||||||| || ||||||||||| |||| |||||| || || ||||||||||
Sbjct 831666 GATTCAACTTCTAAGGTGATAGTTTTACCGGTTAACGTTTTGACGAAAATTTGCATTT 831723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899652870587520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |