Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq14 304 2e-77
seq8 116 5e-21
seq5 102 1e-16
seq21 98.7 1e-15
>seq14
Length=670130
Score = 304 bits (336), Expect = 2e-77
Identities = 587/859 (68%), Gaps = 30/859 (3%)
Strand=Plus/Minus
Query 17861 GCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATT 17920
||||||| || || ||| | |||||||| || |||||||| || | ||||| ||
Sbjct 578599 GCTTTTTGATAATCAGAAACTCTCTTCTCGAAAAAGTTTGTCTTACCAGCTAATGAAATA 578540
Query 17921 AAATTCATAAAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTAT--TAATTCGT 17978
| ||| || |||||||||||||| || ||| | ||||||| || |
Sbjct 578539 TTCTCCATGAAGTCAAATGGATTAGTAACATTGTAAA--TCTTCTTGTTACCTAGAGCAA 578482
Query 17979 ATAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTA 18038
||| | | ||| || ||| |||| |||||||| ||||||||| |||||||||||| |
Sbjct 578481 CTAAAAGACGATCGGCAACATATTCAACATATTGACACATCAAATTGCAATTCATACCAA 578422
Query 18039 GTAGTCTGAAAGGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTTTTA 18098
||| | | || |||||||| ||| |||| ||||| || |||| |||| | |
Sbjct 578421 GTAATGAGGCTGGAAGAGCATCTGTAAAGTATTCCTTCTCAATAGTTACAGCCTCTGTAA 578362
Query 18099 TTATGTTTATTACCCTA----GATTTTGGCAATTTATTAATTATGTGATTATAATATAAT 18154
|||| ||| || || ||| | | |||| || ||| || | |||||
Sbjct 578361 TTATCTTTTCAACAATAATTGGATCGGGTCTATTTTCCAA--ATGGGA-----AAATAAT 578309
Query 18155 AAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTT 18214
|| || |||||||||||||| | ||||||||| | | || ||||| ||| ||| ||
Sbjct 578308 AAGCAAGCAAAATCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTAGAAAAAGTA 578249
Query 18215 AACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAG 18274
| || ||||||| |||||| ||||||| ||| || || ||||||||| || ||| ||
Sbjct 578248 AGGCCTGGCATTAAACCTCTCTTTTTTAACCAGAAAATAGATGCGAAAGAACCAGAGAAA 578189
Query 18275 AATATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAA-ACTGTATTTATTGC 18332
|| ||||| ||||| ||| ||||| || | | | ||||||||| | || || |
Sbjct 578188 AAAATACCTTCAACAGCA-GCGAAAGCAACAAGACGTTCAGCAAATAATG--CTTCCTTA 578132
Query 18333 TCAGT-ATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATA 18391
||| | |||||| || ||||| ||| | | ||||| || | | | || |||
Sbjct 578131 TCACTAATCCATCTTAAAGCCCAATCTGCCTTCTTCTTAATACAAGGAACATTTTCAATA 578072
Query 18392 GCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAA 18451
||||| || ||| || ||||| |||||||| ||||| ||||| ||||| | |||
Sbjct 578071 GCATTGAATAAAAATTCACGCTCTTTAGAATCTTTAATATATGTGTCAATTAATAGTGAA 578012
Query 18452 TACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCG 18511
|| | ||||| ||||| ||||||| || || |||| |||||| | |||| ||
Sbjct 578011 TATGTCTCAGAGTGTATATTTTCCATCATGATTTGGAAACCATAAAAGCACTTAGCTTCT 577952
Query 18512 GGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCA 18571
|| ||||| ||| |||| |||| || ||||| || ||||| ||||| || | |
Sbjct 577951 GGTGTTTGAACCTCAGCCGAAAAGTTTTCAACTAAATTTTCGTTAACAATACCATCTGAA 577892
Query 18572 GATGCGAAAAATGCCAAAACATATTTAATGAAA------TGTTTTTCATTATCCTTGAGA 18625
| |||||||| || || || | ||| ||| | | || |||| ||| |
Sbjct 577891 GCAGCGAAAAAGGCTAAGACGCGTGAAATAAAAAAACGCTCATCTTTATTAAGCTT---A 577835
Query 18626 TTGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGAT 18685
|| | ||| ||| | |||||||| || ||||| |||||| | ||||| ||||||| |
Sbjct 577834 TTTTCCCAATCACCAATATCTTTACTTAAATCAATTTCTTCAGCAGTCCAGAAAGATGCT 577775
Query 18686 TCGGCCTGTTTGTACATTT 18704
|| |||| ||| |||||||
Sbjct 577774 TCAGCCTTTTTATACATTT 577756
Score = 194 bits (214), Expect = 2e-44
Identities = 581/882 (66%), Gaps = 27/882 (3%)
Strand=Plus/Plus
Query 17865 TTTTG-TATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATTAAA 17923
||||| || ||| ||| | || || |||||||| ||||| || | | || ||
Sbjct 211681 TTTTGATAATCTGAAACTCTCTTTTCAAAGAAATTAGTCTTACCAACAAGAGAAATATTT 211740
Query 17924 TTCATAAAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTATTAATTCGTATAAT 17983
| |||||| || || ||||| || | | |||| |||| | | || | |
Sbjct 211741 TCCATAAAGTCGAAAGGATTTGTAGCATCATAAACCTTTTTATTTCCCAAAGCAACGAGC 211800
Query 17984 AATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTAGTAGT 18043
|||||||| || ||| |||| | ||||| ||||||| |||||||||||||| |||| |
Sbjct 211801 AATCTATCAGCAACATATTCAATGTATTGACACATCAAGTCGCAATTCATACCAAGTAAT 211860
Query 18044 CTGAAAGGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTTTTATTATG 18103
|| ||| ||||| || ||| ||||||| || ||| |||||| || | | ||
Sbjct 211861 GAGACAGGAAGAGCCTCGGTAAAGTATTCTTTTTCAATCACAACAGCTTCAGTGACAATT 211920
Query 18104 TTTATTACCCTAGATTTTGG--CAA-TTTATTAATTATGTGATTATAATATAATAAACAC 18160
|| || ||| | || || |||||| | |||| | |||||||||
Sbjct 211921 TTCTCGACAATAGCT---GGATCAGGTTTATTTTGCAAGTGAGCGAA---TAATAAACAT 211974
Query 18161 GCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAACCCG 18220
||||||| || |||| ||||||||||| | || | ||| ||| ||| ||||| ||
Sbjct 211975 CCAAAATCTGTATGTAGACCTTCATCTCGACAGATAAGTTCATTAGAAAAGGTTAAACCA 212034
Query 18221 GGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAATATA 18280
||||||| |||||| ||||| | ||||||||| | || || | ||| || |||| |
Sbjct 212035 GGCATTAAACCTCTCTTTTTCAACCAAAATATGGCAGCAAATGATCCAGAGAAAAATACA 212094
Query 18281 CCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAA-ACTGTATTTATTGCTCAGT-A 18338
|| |||| || || || | ||||| ||| |||| | || || || | || | |
Sbjct 212095 CCTTCAATAGTTGCAAAAGCAACTAATCGTTCCCCAAATAATG-CTTCATCG-TCGTTAA 212152
Query 18339 TCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCATTAA 18398
||||||| | ||| || | | ||||| || || | | || |||||||
Sbjct 212153 TCCATTTCAAAGTCCAGTCAGCCTTCTGTTTGATACATGGGATGTTGACAATTGCATTAA 212212
Query 18399 ACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAAC---AAAGAATACA 18455
| | |||||||| | | ||| | || ||||| || |||| | ||| ||
Sbjct 212213 GAAGAAAGTCTTTTTCAATAGGGTCTCTAATGTAAGTATC---TAACTGTACAGAGTAAG 212269
Query 18456 TTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGAT 18515
||||||||||||| |||| | ||||| || | ||| || | | || || |||
Sbjct 212270 TTTCAGAATGTATATTTTCTGTCATGATCTGGAACCCATAGAAACTTTTGGCTTCAGGAA 212329
Query 18516 ATTGAATCTC-GCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGAT 18574
||||| ||| ||| |||| | || || ||||| |||||||| | ||| |||| | |
Sbjct 212330 TTTGAACCTCTGCT-GAAAAGTTCTCAACTAAATTTTCATTAACAAGACCATCAGATGCT 212388
Query 18575 GCGAAAAATGCCAAAACATATTTA-ATGAAATGTTTTTCATTATCCTTGA---GATTGTT 18630
|| ||||| ||||| || | || | || || | | ||||| || || | | |||
Sbjct 212389 GCAAAAAAAGCCAATAC-TCTTGAGATAAAGAATCTCTCATTTTCGTTTAACTTAGTGTC 212447
Query 18631 CCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGC 18690
||| ||| |||||| || | ||||||| ||| || | ||||| || || | |||
Sbjct 212448 CCAGTCAGGTATATCCTTAGCAAGATCAATTTCCTCTGTAGTCCAGAAGGAAGCCTCGTG 212507
Query 18691 CTGTTTGTACATTTTATAAATATCTTCATGTTGTATAGGAAA 18732
|| |||||||||| |||| || ||| || || |||||
Sbjct 212508 CTTCTTGTACATTTGCCAAATTTCACCATATTTAATTGGAAA 212549
>seq8
Length=1087023
Score = 116 bits (128), Expect = 5e-21
Identities = 167/233 (72%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 155819 TAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGA 155878
|| |||||| || || | ||||| ||||| || ||||| ||||| | || || |||
Sbjct 676916 TACAATGCAGATCTTCGTCAAAACCTTGACCGGTAAAACCATTACTCTCGAGGTTGAATC 676857
Query 155879 TTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGA 155938
||||| | |||| || || || ||||| ||||| || ||||| || ||||||||
Sbjct 676856 CTCTGACACTATTGACAATGTTAAGTCAAAAATTCAAGACAAGGAAGGAATTCCTCCAGA 676797
Query 155939 ACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTA 155998
||||||||||| || | ||||||||| || | ||||| | || ||||| || ||
Sbjct 676796 CCAACAAAGATTAATCTTTGCCGGTAAACAATTAGAAGACGGACGTACCTTATCTGACTA 676737
Query 155999 TAATATATCCAAAG-AGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| || || |||| | | || | ||||| || || ||||||||||| |||
Sbjct 676736 CAACAT-TCAAAAGGAATCCACTTTACATTTGGTTTTGAGATTAAGAGGTGGT 676685
>seq5
Length=1301127
Score = 102 bits (112), Expect = 1e-16
Identities = 164/234 (70%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| ||||| || ||| | ||||| | || || || |||||||| | || || ||
Sbjct 1173875 AAGATGCAGATTTTTGTCAAAACCCTTACCGGTAAGACTATTACCCTCGAGGTAGAGTCA 1173816
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
|| |||| |||| || || || || || || || || ||||| || ||||||||
Sbjct 1173815 TCCGATACTATTGACAATGTTAAGTCAAAGATCCAGGACAAGGAAGGAATCCCTCCAGAC 1173756
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|||||| | || || | ||| |||||||| | |||||| | |||||||| |||||
Sbjct 1173755 CAACAACGTTTAATCTTTGCTGGTAAGCAATTAGAAGATGGACGTACTTTATCTGATTAC 1173696
Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
|| || ||||| || | || | ||||| || || ||||||||||| ||||
Sbjct 1173695 AACAT--CCAAAAGGAATCAACTTTACATTTGGTTTTGAGATTAAGAGGTGGTG 1173644
>seq21
Length=453462
Score = 98.7 bits (108), Expect = 1e-15
Identities = 161/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| | || || | || || ||||| || || | || |||||| |
Sbjct 371524 ATGCAGATTTTTGTCAAGACGCTAACGGGTAAAACCATCACTCTTGAGGTCGAATCCAGT 371583
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| || || || ||| || || ||||| || ||||| || || ||||| |||
Sbjct 371584 GATACAATCGATAATGTTAAATCAAAGATCCAAGACAAGGAAGGAATTCCCCCAGATCAA 371643
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | || |||| ||| ||||| || || |||||| | |||||||| ||||| ||
Sbjct 371644 CAACGTTTAATTTTTGCTGGTAAACAACTAGAAGATGGTCGTACTTTATCTGATTACAAC 371703
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| ||||| ||| | || | || || || |||||||||||||| |||
Sbjct 371704 AT--CCAAAAGGAGTCTACCTTACACTTGGTTTTAAGATTAAGAGGTGGT 371751
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731870755817600
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