Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq14 201 2e-46 seq8 179 7e-40 seq21 168 1e-36 seq12 147 4e-30 seq5 147 4e-30 >seq14 Length=670130 Score = 201 bits (222), Expect = 2e-46 Identities = 531/807 (66%), Gaps = 22/807 (3%) Strand=Plus/Minus Query 49576 CTAATGATATTAAATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTA 49635 ||||||| || | ||| || ||||||||||| | ||| ||| || || | || Sbjct 578550 CTAATGAAATATTCTCCATGAAGTCAAATGGATTAGTAACATTGTAA-ATCTTCTTGTTA 578492 Query 49636 TCAATA-CATATAATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAA 49694 | | | || ||| | | |||||| ||| ||||||||||||| |||| || | ||| Sbjct 578491 CCTAGAGCAACTAAAAGACGATCGGCAACATATTCAACATATTGACACATCAAATTGCAA 578432 Query 49695 TTCATACCCAATAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctaca 49754 |||||||| | |||| ||| | ||||| || |||| || || || |||| Sbjct 578431 TTCATACCAAGTAATGAGGCTGGAAGAGCATCTGTAAAGTATTCCTTCTCAATAGTTACA 578372 Query 49755 gcttgtttaattatcataattatattattttttgataatttatatttaatatgattcgca 49814 || | | |||||||| | || | || || ||| | ||||| | || | | Sbjct 578371 GCCTCTGTAATTATCTT--TTCAACAATAATTGGATCGGGTCTATTTTCCAA-ATGGGAA 578315 Query 49815 tatattaaACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTA 49874 ||| ||| || ||||||||||| || | ||| || || | | | || ||||||||| | Sbjct 578314 AATAATAAGCAAGCAAAATCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTAGAA 578255 Query 49875 AAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTA 49934 ||||| | ||||||||||| ||||||||||| | ||| || || ||||| ||| || | Sbjct 578254 AAAGTAAGGCCTGGCATTAAACCTCTCTTTTTTAACCAGAAAATAGATGCGAAAGAACCA 578195 Query 49935 GAAAAGAATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAAT--- 49991 || || || ||||| || ||| || || || | | | | | |||| | | | Sbjct 578194 GAGAAAAAAATACCTTCAACAGCAGCGAAAGCAACAAGACGTTCAGCAAATAATGCTTCC 578135 Query 49992 TTATCATCTAATATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTT 50051 |||||| ||| ||||| ||| |||||||||||| || || || ||| |||| | |||| Sbjct 578134 TTATCA-CTA--ATCCATCTTAAAGCCCAATCTGCCTTCTTCTTAATACAAGGAACATTT 578078 Query 50052 TCTATAGCTTTAAAT---AATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATT 50108 || ||||| || ||| |||||| | || | ||| Sbjct 578077 TCAATAGCATTGAATAAAAATTCACGCTCTTTA---GAATCTTTAATATATGTGTCAATT 578021 Query 50109 AATAAAGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGT 50168 |||| ||||| | ||||| |||| | |||||| ||||| || |||||| Sbjct 578020 AATAGTGAATATGTCTCAGAGTGTATATTTTCCATCATGATTTGGAAACCATAAAAGCAC 577961 Query 50169 CTTGCTTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATA 50228 | ||||||| ||||| || | | || |||||||||||| || |||||| Sbjct 577960 TTAGCTTCTGGTGTTTGAACCTCAGCCGAAAAGTTTTCAACTAAATTTTCGTTAACAATA 577901 Query 50229 CCATCAGATGCTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTT 50288 ||||| || || ||||| || ||||| ||| | ||||||| ||| | | | || Sbjct 577900 CCATCTGAAGCAGCGAAAAAGGCTAAGACGCGTGAAATAAAAAAACGCTCA-TCTTTATT 577842 Query 50289 AA----ATTTTCCCAAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAA 50344 || |||||||||| ||| ||| || |||||| | |||||| ||||| || Sbjct 577841 AAGCTTATTTTCCCAATCACCAATATCTTTACTTAAATCAATTTCTTCAGCAGTCCAGAA 577782 Query 50345 TGATGCTACGGATTTTTTATACATTTG 50371 |||||| | | |||||||||||||| Sbjct 577781 AGATGCTTCAGCCTTTTTATACATTTG 577755 Score = 150 bits (166), Expect = 4e-31 Identities = 537/835 (64%), Gaps = 34/835 (4%) Strand=Plus/Plus Query 49592 CATAAAATCAAATGGATTTTTGGTATTATAA---TATTTTTCTCCTATCAATACATATAA 49648 |||||| || || |||||| | | || |||| | ||| | ||| ||| || | Sbjct 211743 CATAAAGTCGAAAGGATTTGTAGCATCATAAACCTTTTTATTTCC---CAAAGCAACGAG 211799 Query 49649 TAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAATAA 49708 |||||||| || ||| |||||| ||||| |||| || || ||||||||||| | ||| Sbjct 211800 CAATCTATCAGCAACATATTCAATGTATTGACACATCAAGTCGCAATTCATACCAAGTAA 211859 Query 49709 TTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgttt---aat 49765 | | || | || || || |||||||||| || | ||||||| | ||| Sbjct 211860 TGAGACAGGAAGAGCCTCGGTAAAGTATTCTTTTTCAATCACAACAGCTTCAGTGACAAT 211919 Query 49766 tatcataattatattattttttgataa--tttatatttaatatgattcgcatatattaaA 49823 | || | ||| | ||| | ||||| || | ||| || ||| |||| Sbjct 211920 TTTCTCGACAATAGC-----TGGATCAGGTTTATTTTGCAAGTGA---GCGAATAATAAA 211971 Query 49824 CATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAAT 49883 ||| ||||||| ||||||| ||| || || | | | |||| ||||||| ||| ||||| Sbjct 211972 CATCCAAAATCTGTATGTAGACCTTCATCTCGACAGATAAGTTCATTAGAAAAGGTTAAA 212031 Query 49884 CCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAAT 49943 || |||||||| ||||||||||| | ||||||||| | ||||| | ||| || ||| Sbjct 212032 CCAGGCATTAAACCTCTCTTTTTCAACCAAAATATGGCAGCAAATGATCCAGAGAAAAAT 212091 Query 49944 ATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAT 50003 | ||| || | | ||||| || | || || | | ||||| | | || ||| || Sbjct 212092 ACACCTTCAATAGTTGCAAAAGCAACTAATCGTTCCCCAAATAATGCTTCATCGTCGTTA 212151 Query 50004 ATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTA 50063 ||||| || | || ||| || || || | ||||||| | || || || | || || ||| Sbjct 212152 ATCCATTTCAAAGTCCAGTCAGCCTTCTGTTTGATACATGGGATGTTGACAATTGCATTA 212211 Query 50064 AATAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACATT 50123 | | | ||||||| | || ||| || || Sbjct 212212 AGAAGAAAGTCTTTTTCAATAGGGTCTCTAATGTAAGTATCTAACTGTACAGAGTAAGTT 212271 Query 50124 TCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATAC 50183 |||||||||| | ||| | || || || ||| || | | ||||| | | Sbjct 212272 TCAGAATGTATATTTTCTGTCATGATCTGGAACCCATAGAAACTTTTGGCTTCAGGAATT 212331 Query 50184 TGAA---CTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCT 50240 |||| || | |||||| || ||||||||||| ||| |||| ||||||||||||| Sbjct 212332 TGAACCTCTGCTGAAAAG-TTC--TCAACTAAATTTTCATTAACAAGACCATCAGATGCT 212388 Query 50241 GCGAAGAATGCTAAAACGTATTTA-ATAAAATGTTTTTCATTATCTTTTAAATT--TTCC 50297 || || || || || || | || | ||||| | | ||||| || ||||| || | | Sbjct 212389 GCAAAAAAAGCCAATAC-TCTTGAGATAAAGAATCTCTCATTTTCGTTTAACTTAGTGTC 212447 Query 50298 CAAGATTCA---AGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACG 50354 | || ||| | ||| || | | ||| | ||| ||| | ||||| || || || || Sbjct 212448 CCAG--TCAGGTATATCCTTAGCAAGATCAATTTCCTCTGTAGTCCAGAAGGAAGCCTCG 212505 Query 50355 GATTTTTTATACATTTGATATATATCAAAATGTTCAATGGGAAATAGTACATATC 50409 || || |||||||| | || ||| || || ||| ||||| | ||| ||| Sbjct 212506 TGCTTCTTGTACATTTGCCAAATTTCACCATATTTAATTGGAAACATAACAAATC 212560 >seq8 Length=1087023 Score = 179 bits (198), Expect = 7e-40 Identities = 187/243 (77%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATA 192357 ||| ||||||||||||||| | | || || ||||||||||| | | |||| || || Sbjct 676675 GTTCAATAATACCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGA-ATG 676733 Query 192358 TTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGT 192417 || || |||||||| || ||| | || || ||||||||||| |||||||||||||| ||| Sbjct 676734 TTGTAGTCAGATAAGGTACGTCCGTCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGT 676793 Query 192418 TGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCT 192477 || || || || |||||||| || ||||| ||||| || ||||| |||| || Sbjct 676794 TGGTCTGGAGGAATTCCTTCCTTGTCTTGAATTTTTGACTTAACATTGTCAATAGTGTCA 676853 Query 192478 GACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || ||||| || || ||||||||||||||||| || || ||||| | || ||||||||| Sbjct 676854 GAGGATTCAACCTCGAGAGTAATGGTTTTACCGGTCAAGGTTTTGACGAAGATCTGCATT 676913 Query 192538 TTA 192540 || Sbjct 676914 GTA 676916 >seq21 Length=453462 Score = 168 bits (186), Expect = 1e-36 Identities = 180/238 (76%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358 ||| ||||||||||||||| | | ||| || || ||||| |||| ||| || ||| | Sbjct 371761 GTTCAATAATACCACCTCTTAATCTTAAAACCAAGTGTAAGGTAGACTCCTTTTGGATGT 371702 Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418 | ||||||||||| || || |||| || | ||||||||||||||| ||||| | |||| Sbjct 371701 TGTAATCAGATAAAGTACGACCATCTTCTAGTTGTTTACCAGCAAAAATTAAACGTTGTT 371642 Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478 |||| || || |||||||| || ||||| || || ||| |||||| || | ||| Sbjct 371641 GATCTGGGGGAATTCCTTCCTTGTCTTGGATCTTTGATTTAACATTATCGATTGTATCAC 371582 Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || || ||||| ||||||||||| |||| || || | ||| |||||||| Sbjct 371581 TGGATTCGACCTCAAGAGTGATGGTTTTACCCGTTAGCGTCTTGACAAAAATCTGCAT 371524 >seq12 Length=712717 Score = 147 bits (162), Expect = 4e-30 Identities = 173/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | | || ||||||||||| | || || ||| || || ||||| Sbjct 150924 ACCACCTCTCAATCTGAGAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAGTCAGA 150983 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 ||| || || |||| |||||||| ||||||||||| || || | |||||||| || || Sbjct 150984 TAAGGTACGGCCATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGG 151043 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 ||||| || |||||||| || || ||| |||||| |||| || || || || || Sbjct 151044 AATTCCCTCCTTATCTTGAATCTTTGATTTGACATTATCAATAGTGTCAGATGACTCAAC 151103 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTATT 192542 || |||||||| || || || || | ||||||| ||| ||||||||||| || Sbjct 151104 CTCAAGAGTAATTGTCTTCCCTGTAAGGGTTTTAACAAAAATCTGCATTTTTTT 151157 >seq5 Length=1301127 Score = 147 bits (162), Expect = 4e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | || || ||||||||||| | || || ||| || |||||||| Sbjct 1173645 ACCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAATCAGA 1173704 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 ||| || ||| |||| || ||||| ||||||||||||||||| | ||||| || || || Sbjct 1173705 TAAAGTACGTCCATCTTCTAATTGCTTACCAGCAAAGATTAAACGTTGTTGGTCTGGAGG 1173764 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 |||||||| || || || || || || ||||| |||| ||| || || ||||| Sbjct 1173765 GATTCCTTCCTTGTCCTGGATCTTTGACTTAACATTGTCAATAGTATCGGATGACTCTAC 1173824 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 || || ||||| || ||||| || | ||||| | ||| |||||||| || Sbjct 1173825 CTCGAGGGTAATAGTCTTACCGGTAAGGGTTTTGACAAAAATCTGCATCTT 1173875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984478284543600