Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq14 201 2e-46
seq8 179 7e-40
seq21 168 1e-36
seq12 147 4e-30
seq5 147 4e-30
>seq14
Length=670130
Score = 201 bits (222), Expect = 2e-46
Identities = 531/807 (66%), Gaps = 22/807 (3%)
Strand=Plus/Minus
Query 49576 CTAATGATATTAAATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTA 49635
||||||| || | ||| || ||||||||||| | ||| ||| || || | ||
Sbjct 578550 CTAATGAAATATTCTCCATGAAGTCAAATGGATTAGTAACATTGTAA-ATCTTCTTGTTA 578492
Query 49636 TCAATA-CATATAATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAA 49694
| | | || ||| | | |||||| ||| ||||||||||||| |||| || | |||
Sbjct 578491 CCTAGAGCAACTAAAAGACGATCGGCAACATATTCAACATATTGACACATCAAATTGCAA 578432
Query 49695 TTCATACCCAATAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctaca 49754
|||||||| | |||| ||| | ||||| || |||| || || || ||||
Sbjct 578431 TTCATACCAAGTAATGAGGCTGGAAGAGCATCTGTAAAGTATTCCTTCTCAATAGTTACA 578372
Query 49755 gcttgtttaattatcataattatattattttttgataatttatatttaatatgattcgca 49814
|| | | |||||||| | || | || || ||| | ||||| | || | |
Sbjct 578371 GCCTCTGTAATTATCTT--TTCAACAATAATTGGATCGGGTCTATTTTCCAA-ATGGGAA 578315
Query 49815 tatattaaACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTA 49874
||| ||| || ||||||||||| || | ||| || || | | | || ||||||||| |
Sbjct 578314 AATAATAAGCAAGCAAAATCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTAGAA 578255
Query 49875 AAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTA 49934
||||| | ||||||||||| ||||||||||| | ||| || || ||||| ||| || |
Sbjct 578254 AAAGTAAGGCCTGGCATTAAACCTCTCTTTTTTAACCAGAAAATAGATGCGAAAGAACCA 578195
Query 49935 GAAAAGAATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAAT--- 49991
|| || || ||||| || ||| || || || | | | | | |||| | | |
Sbjct 578194 GAGAAAAAAATACCTTCAACAGCAGCGAAAGCAACAAGACGTTCAGCAAATAATGCTTCC 578135
Query 49992 TTATCATCTAATATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTT 50051
|||||| ||| ||||| ||| |||||||||||| || || || ||| |||| | ||||
Sbjct 578134 TTATCA-CTA--ATCCATCTTAAAGCCCAATCTGCCTTCTTCTTAATACAAGGAACATTT 578078
Query 50052 TCTATAGCTTTAAAT---AATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATT 50108
|| ||||| || ||| |||||| | || | |||
Sbjct 578077 TCAATAGCATTGAATAAAAATTCACGCTCTTTA---GAATCTTTAATATATGTGTCAATT 578021
Query 50109 AATAAAGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGT 50168
|||| ||||| | ||||| |||| | |||||| ||||| || ||||||
Sbjct 578020 AATAGTGAATATGTCTCAGAGTGTATATTTTCCATCATGATTTGGAAACCATAAAAGCAC 577961
Query 50169 CTTGCTTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATA 50228
| ||||||| ||||| || | | || |||||||||||| || ||||||
Sbjct 577960 TTAGCTTCTGGTGTTTGAACCTCAGCCGAAAAGTTTTCAACTAAATTTTCGTTAACAATA 577901
Query 50229 CCATCAGATGCTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTT 50288
||||| || || ||||| || ||||| ||| | ||||||| ||| | | | ||
Sbjct 577900 CCATCTGAAGCAGCGAAAAAGGCTAAGACGCGTGAAATAAAAAAACGCTCA-TCTTTATT 577842
Query 50289 AA----ATTTTCCCAAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAA 50344
|| |||||||||| ||| ||| || |||||| | |||||| ||||| ||
Sbjct 577841 AAGCTTATTTTCCCAATCACCAATATCTTTACTTAAATCAATTTCTTCAGCAGTCCAGAA 577782
Query 50345 TGATGCTACGGATTTTTTATACATTTG 50371
|||||| | | ||||||||||||||
Sbjct 577781 AGATGCTTCAGCCTTTTTATACATTTG 577755
Score = 150 bits (166), Expect = 4e-31
Identities = 537/835 (64%), Gaps = 34/835 (4%)
Strand=Plus/Plus
Query 49592 CATAAAATCAAATGGATTTTTGGTATTATAA---TATTTTTCTCCTATCAATACATATAA 49648
|||||| || || |||||| | | || |||| | ||| | ||| ||| || |
Sbjct 211743 CATAAAGTCGAAAGGATTTGTAGCATCATAAACCTTTTTATTTCC---CAAAGCAACGAG 211799
Query 49649 TAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAATAA 49708
|||||||| || ||| |||||| ||||| |||| || || ||||||||||| | |||
Sbjct 211800 CAATCTATCAGCAACATATTCAATGTATTGACACATCAAGTCGCAATTCATACCAAGTAA 211859
Query 49709 TTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgttt---aat 49765
| | || | || || || |||||||||| || | ||||||| | |||
Sbjct 211860 TGAGACAGGAAGAGCCTCGGTAAAGTATTCTTTTTCAATCACAACAGCTTCAGTGACAAT 211919
Query 49766 tatcataattatattattttttgataa--tttatatttaatatgattcgcatatattaaA 49823
| || | ||| | ||| | ||||| || | ||| || ||| ||||
Sbjct 211920 TTTCTCGACAATAGC-----TGGATCAGGTTTATTTTGCAAGTGA---GCGAATAATAAA 211971
Query 49824 CATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAAT 49883
||| ||||||| ||||||| ||| || || | | | |||| ||||||| ||| |||||
Sbjct 211972 CATCCAAAATCTGTATGTAGACCTTCATCTCGACAGATAAGTTCATTAGAAAAGGTTAAA 212031
Query 49884 CCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAAT 49943
|| |||||||| ||||||||||| | ||||||||| | ||||| | ||| || |||
Sbjct 212032 CCAGGCATTAAACCTCTCTTTTTCAACCAAAATATGGCAGCAAATGATCCAGAGAAAAAT 212091
Query 49944 ATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAT 50003
| ||| || | | ||||| || | || || | | ||||| | | || ||| ||
Sbjct 212092 ACACCTTCAATAGTTGCAAAAGCAACTAATCGTTCCCCAAATAATGCTTCATCGTCGTTA 212151
Query 50004 ATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTA 50063
||||| || | || ||| || || || | ||||||| | || || || | || || |||
Sbjct 212152 ATCCATTTCAAAGTCCAGTCAGCCTTCTGTTTGATACATGGGATGTTGACAATTGCATTA 212211
Query 50064 AATAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACATT 50123
| | | ||||||| | || ||| || ||
Sbjct 212212 AGAAGAAAGTCTTTTTCAATAGGGTCTCTAATGTAAGTATCTAACTGTACAGAGTAAGTT 212271
Query 50124 TCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATAC 50183
|||||||||| | ||| | || || || ||| || | | ||||| | |
Sbjct 212272 TCAGAATGTATATTTTCTGTCATGATCTGGAACCCATAGAAACTTTTGGCTTCAGGAATT 212331
Query 50184 TGAA---CTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCT 50240
|||| || | |||||| || ||||||||||| ||| |||| |||||||||||||
Sbjct 212332 TGAACCTCTGCTGAAAAG-TTC--TCAACTAAATTTTCATTAACAAGACCATCAGATGCT 212388
Query 50241 GCGAAGAATGCTAAAACGTATTTA-ATAAAATGTTTTTCATTATCTTTTAAATT--TTCC 50297
|| || || || || || | || | ||||| | | ||||| || ||||| || | |
Sbjct 212389 GCAAAAAAAGCCAATAC-TCTTGAGATAAAGAATCTCTCATTTTCGTTTAACTTAGTGTC 212447
Query 50298 CAAGATTCA---AGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACG 50354
| || ||| | ||| || | | ||| | ||| ||| | ||||| || || || ||
Sbjct 212448 CCAG--TCAGGTATATCCTTAGCAAGATCAATTTCCTCTGTAGTCCAGAAGGAAGCCTCG 212505
Query 50355 GATTTTTTATACATTTGATATATATCAAAATGTTCAATGGGAAATAGTACATATC 50409
|| || |||||||| | || ||| || || ||| ||||| | ||| |||
Sbjct 212506 TGCTTCTTGTACATTTGCCAAATTTCACCATATTTAATTGGAAACATAACAAATC 212560
>seq8
Length=1087023
Score = 179 bits (198), Expect = 7e-40
Identities = 187/243 (77%), Gaps = 2/243 (1%)
Strand=Plus/Plus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATA 192357
||| ||||||||||||||| | | || || ||||||||||| | | |||| || ||
Sbjct 676675 GTTCAATAATACCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGA-ATG 676733
Query 192358 TTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGT 192417
|| || |||||||| || ||| | || || ||||||||||| |||||||||||||| |||
Sbjct 676734 TTGTAGTCAGATAAGGTACGTCCGTCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGT 676793
Query 192418 TGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCT 192477
|| || || || |||||||| || ||||| ||||| || ||||| |||| ||
Sbjct 676794 TGGTCTGGAGGAATTCCTTCCTTGTCTTGAATTTTTGACTTAACATTGTCAATAGTGTCA 676853
Query 192478 GACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
|| ||||| || || ||||||||||||||||| || || ||||| | || |||||||||
Sbjct 676854 GAGGATTCAACCTCGAGAGTAATGGTTTTACCGGTCAAGGTTTTGACGAAGATCTGCATT 676913
Query 192538 TTA 192540
||
Sbjct 676914 GTA 676916
>seq21
Length=453462
Score = 168 bits (186), Expect = 1e-36
Identities = 180/238 (76%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358
||| ||||||||||||||| | | ||| || || ||||| |||| ||| || ||| |
Sbjct 371761 GTTCAATAATACCACCTCTTAATCTTAAAACCAAGTGTAAGGTAGACTCCTTTTGGATGT 371702
Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418
| ||||||||||| || || |||| || | ||||||||||||||| ||||| | ||||
Sbjct 371701 TGTAATCAGATAAAGTACGACCATCTTCTAGTTGTTTACCAGCAAAAATTAAACGTTGTT 371642
Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478
|||| || || |||||||| || ||||| || || ||| |||||| || | |||
Sbjct 371641 GATCTGGGGGAATTCCTTCCTTGTCTTGGATCTTTGATTTAACATTATCGATTGTATCAC 371582
Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| || || ||||| ||||||||||| |||| || || | ||| ||||||||
Sbjct 371581 TGGATTCGACCTCAAGAGTGATGGTTTTACCCGTTAGCGTCTTGACAAAAATCTGCAT 371524
>seq12
Length=712717
Score = 147 bits (162), Expect = 4e-30
Identities = 173/234 (74%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | | || ||||||||||| | || || ||| || || |||||
Sbjct 150924 ACCACCTCTCAATCTGAGAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAGTCAGA 150983
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
||| || || |||| |||||||| ||||||||||| || || | |||||||| || ||
Sbjct 150984 TAAGGTACGGCCATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGG 151043
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
||||| || |||||||| || || ||| |||||| |||| || || || || ||
Sbjct 151044 AATTCCCTCCTTATCTTGAATCTTTGATTTGACATTATCAATAGTGTCAGATGACTCAAC 151103
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTATT 192542
|| |||||||| || || || || | ||||||| ||| ||||||||||| ||
Sbjct 151104 CTCAAGAGTAATTGTCTTCCCTGTAAGGGTTTTAACAAAAATCTGCATTTTTTT 151157
>seq5
Length=1301127
Score = 147 bits (162), Expect = 4e-30
Identities = 171/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | || || ||||||||||| | || || ||| || ||||||||
Sbjct 1173645 ACCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAATCAGA 1173704
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
||| || ||| |||| || ||||| ||||||||||||||||| | ||||| || || ||
Sbjct 1173705 TAAAGTACGTCCATCTTCTAATTGCTTACCAGCAAAGATTAAACGTTGTTGGTCTGGAGG 1173764
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|||||||| || || || || || || ||||| |||| ||| || || |||||
Sbjct 1173765 GATTCCTTCCTTGTCCTGGATCTTTGACTTAACATTGTCAATAGTATCGGATGACTCTAC 1173824
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| || ||||| || ||||| || | ||||| | ||| |||||||| ||
Sbjct 1173825 CTCGAGGGTAATAGTCTTACCGGTAAGGGTTTTGACAAAAATCTGCATCTT 1173875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984478284543600
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