Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq14 214 3e-50
seq8 185 2e-41
seq21 154 3e-32
seq5 138 2e-27
seq12 136 7e-27
>seq14
Length=670130
Score = 214 bits (236), Expect = 3e-50
Identities = 552/848 (65%), Gaps = 10/848 (1%)
Strand=Plus/Minus
Query 38831 TTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAA 38890
|||||| || ||||||||| | || |||||||||||||| || || ||||||| ||
Sbjct 578597 TTTTTGATAATCAGAAACTCTCTTCTCGAAAAAGTTTGTCTTACCAGCTAATGAAATATT 578538
Query 38891 ATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATA-CATATA 38949
| ||| || ||||||||||| | ||| ||| || || | || | | | || ||
Sbjct 578537 CTCCATGAAGTCAAATGGATTAGTAACATTGTAA-ATCTTCTTGTTACCTAGAGCAACTA 578479
Query 38950 ATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATA 39009
| | | |||||| ||| ||||||||||||| |||| || | ||||||||||| | ||
Sbjct 578478 AAAGACGATCGGCAACATATTCAACATATTGACACATCAAATTGCAATTCATACCAAGTA 578419
Query 39010 ATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatta 39069
|| ||| | ||||| || |||| || || || |||||| | | ||||||
Sbjct 578418 ATGAGGCTGGAAGAGCATCTGTAAAGTATTCCTTCTCAATAGTTACAGCCTCTGTAATTA 578359
Query 39070 tcataattatattattttttgataatttatatttaatatgattcgcatataGTAAACATG 39129
|| | || | || || ||| | ||||| | || | | ||| ||| || |
Sbjct 578358 TCTT--TTCAACAATAATTGGATCGGGTCTATTTTCCAA-ATGGGAAAATAATAAGCAAG 578302
Query 39130 CAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTG 39189
||||||| || || | |||||| || | | | || ||||||||| |||||| | ||||
Sbjct 578301 CAAAATCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTAGAAAAAGTAAGGCCTG 578242
Query 39190 GCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATAC 39249
||||||| ||||||||||| | ||| || || ||||| ||| || ||| || || ||||
Sbjct 578241 GCATTAAACCTCTCTTTTTTAACCAGAAAATAGATGCGAAAGAACCAGAGAAAAAAATAC 578182
Query 39250 CCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAATCC 39309
| || ||| || || || | | | | | |||| | | || | ||| |||||
Sbjct 578181 CTTCAACAGCAGCGAAAGCAACAAGACGTTCAGCAAATAATGCTTCCTTATCACTAATCC 578122
Query 39310 AATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATA 39369
| ||| ||||||||||| || || || ||| |||| | |||||| ||||| || ||||
Sbjct 578121 ATCTTAAAGCCCAATCTGCCTTCTTCTTAATACAAGGAACATTTTCAATAGCATTGAATA 578062
Query 39370 ATTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAATACATTTCAG 39429
| | ||||| | ||||
Sbjct 578061 AAAATTCACGCTCTTTAGAATCTTTAATATATGTGTCAATTAATAGTGAATATGTCTCAG 578002
Query 39430 AATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGCTTCTGAATACTGAA 39489
| |||| | |||||| ||||| || |||||| | | ||||||| ||||
Sbjct 578001 AGTGTATATTTTCCATCATGATTTGGAAACCATAAAAGCACTTAGCTTCTGGTGTTTGAA 577942
Query 39490 CTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGAAGA 39549
| || | | || |||||||||||| || ||||||||||| || || ||||| |
Sbjct 577941 CCTCAGCCGAAAAGTTTTCAACTAAATTTTCGTTAACAATACCATCTGAAGCAGCGAAAA 577882
Query 39550 ATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAA----ATTTTCCCAAGAT 39605
| ||||| || | ||||||| ||| | | | |||| ||||||||||
Sbjct 577881 AGGCTAAGACGCGTGAAATAAAAAAACGCTCA-TCTTTATTAAGCTTATTTTCCCAATCA 577823
Query 39606 TCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAAAGATGCTACGGATTTTTTA 39665
||| ||| || |||||| | |||||| ||||| ||||||||| | | ||||||
Sbjct 577822 CCAATATCTTTACTTAAATCAATTTCTTCAGCAGTCCAGAAAGATGCTTCAGCCTTTTTA 577763
Query 39666 TACATTTG 39673
||||||||
Sbjct 577762 TACATTTG 577755
Score = 163 bits (180), Expect = 5e-35
Identities = 364/543 (67%), Gaps = 19/543 (3%)
Strand=Plus/Plus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
||||| || || |||||| | ||||| || || || || || || | | || ||
Sbjct 211681 TTTTGATAATCTGAAACTCTCTTTTCAAAGAAATTAGTCTTACCAACAAGAGAAATATTT 211740
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAA---TATTTTTCTCCTATCAATACATAT 38948
| |||||| || || |||||| | | || |||| | ||| | ||| ||| ||
Sbjct 211741 TCCATAAAGTCGAAAGGATTTGTAGCATCATAAACCTTTTTATTTCC---CAAAGCAACG 211797
Query 38949 AATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAAT 39008
| |||||||| || ||| |||||| ||||| |||| || || ||||||||||| | |
Sbjct 211798 AGCAATCTATCAGCAACATATTCAATGTATTGACACATCAAGTCGCAATTCATACCAAGT 211857
Query 39009 AATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgttt---a 39065
||| | || | || || || |||||||||| || | ||||||| | |
Sbjct 211858 AATGAGACAGGAAGAGCCTCGGTAAAGTATTCTTTTTCAATCACAACAGCTTCAGTGACA 211917
Query 39066 attatcataattatattattttttgataa--tttatatttaatatgattcgcatataGTA 39123
||| || | ||| | ||| | ||||| || | ||| || ||| ||
Sbjct 211918 ATTTTCTCGACAATAGC-----TGGATCAGGTTTATTTTGCAAGTGA---GCGAATAATA 211969
Query 39124 AACATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTA 39183
||||| ||||||| ||||||| |||||| || | | | |||| ||||||| ||| ||||
Sbjct 211970 AACATCCAAAATCTGTATGTAGACCTTCATCTCGACAGATAAGTTCATTAGAAAAGGTTA 212029
Query 39184 ATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGA 39243
| || |||||||| ||||||||||| | ||||||||| | ||||| | ||| || |
Sbjct 212030 AACCAGGCATTAAACCTCTCTTTTTCAACCAAAATATGGCAGCAAATGATCCAGAGAAAA 212089
Query 39244 ATATACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTA 39303
||| ||| || | | ||||| || | || || | | ||||| | | || ||| ||
Sbjct 212090 ATACACCTTCAATAGTTGCAAAAGCAACTAATCGTTCCCCAAATAATGCTTCATCGTCGT 212149
Query 39304 AAATCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTT 39363
|||||| || | | ||| || || || | ||||||| | || || || | || || |
Sbjct 212150 TAATCCATTTCAAAGTCCAGTCAGCCTTCTGTTTGATACATGGGATGTTGACAATTGCAT 212209
Query 39364 TAA 39366
|||
Sbjct 212210 TAA 212212
>seq8
Length=1087023
Score = 185 bits (204), Expect = 2e-41
Identities = 183/237 (77%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|||||||||||||| | || || || ||||||||||| | || || ||| || ||
Sbjct 676680 ATAATACCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAG 676739
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| ||||| | ||| |||| || ||||||||||| ||||| |||||||| ||||||||
Sbjct 676740 TCAGATAAGGTACGTCCGTCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCT 676799
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
|| || |||||||| || ||||| ||||| || ||||| ||||| || || |||
Sbjct 676800 GGAGGAATTCCTTCCTTGTCTTGAATTTTTGACTTAACATTGTCAATAGTGTCAGAGGAT 676859
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTA 172073
|| || || ||||||||||||||||| || || ||||| | ||| ||||||||| ||
Sbjct 676860 TCAACCTCGAGAGTAATGGTTTTACCGGTCAAGGTTTTGACGAAGATCTGCATTGTA 676916
>seq21
Length=453462
Score = 154 bits (170), Expect = 3e-32
Identities = 174/233 (75%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|||||||||||||| | || ||| || || ||||| |||| ||| || || || |||
Sbjct 371756 ATAATACCACCTCTTAATCTTAAAACCAAGTGTAAGGTAGACTCCTTTTGGATGTTGTAA 371697
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| ||||||| || | || || | ||||||||||||||||||||| | ||||| ||
Sbjct 371696 TCAGATAAAGTACGACCATCTTCTAGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCT 371637
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
|| || |||||||| || ||||| || || ||| |||||| || ||||| |||
Sbjct 371636 GGGGGAATTCCTTCCTTGTCTTGGATCTTTGATTTAACATTATCGATTGTATCACTGGAT 371577
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || ||||| ||||||||||| |||| || || | || ||||||||
Sbjct 371576 TCGACCTCAAGAGTGATGGTTTTACCCGTTAGCGTCTTGACAAAAATCTGCAT 371524
>seq5
Length=1301127
Score = 138 bits (152), Expect = 2e-27
Identities = 174/239 (73%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || || || ||||||||||| | || || || ||
Sbjct 1173637 TTCTTACCACCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCCTTTTGGATGTTG 1173696
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
||||| ||||||| ||| | || || ||||| ||||||||||| ||||| | ||||||
Sbjct 1173697 TAATCAGATAAAGTACGTCCATCTTCTAATTGCTTACCAGCAAAGATTAAACGTTGTTGG 1173756
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|| || || |||||||| || || || || || || ||||| |||||||| ||
Sbjct 1173757 TCTGGAGGGATTCCTTCCTTGTCCTGGATCTTTGACTTAACATTGTCAATAGTATCGGAT 1173816
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
|| ||||| || || ||||| || ||||| || | ||||| | || |||||||| ||
Sbjct 1173817 GACTCTACCTCGAGGGTAATAGTCTTACCGGTAAGGGTTTTGACAAAAATCTGCATCTT 1173875
>seq12
Length=712717
Score = 136 bits (150), Expect = 7e-27
Identities = 176/243 (72%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892
|||| || ||||||||| | || | || ||||||||||| | || || || ||
Sbjct 150915 TTTCTTACCACCACCTCTCAATCTGAGAACCAAATGTAAAGTTGATTCCTTTTGGATGTT 150974
Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952
|| || ||||| | || | || |||||||| |||||||||||||| || | |||||
Sbjct 150975 GTAGTCAGATAAGGTACGGCCATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTG 151034
Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012
|| || || ||||| || |||||||| || || ||| |||||| ||||| || ||
Sbjct 151035 ATCTGGAGGAATTCCCTCCTTATCTTGAATCTTTGATTTGACATTATCAATAGTGTCAGA 151094
Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
|| || || || |||||||| || || || || | ||||||| || |||||||||||
Sbjct 151095 TGACTCAACCTCAAGAGTAATTGTCTTCCCTGTAAGGGTTTTAACAAAAATCTGCATTTT 151154
Query 172073 ATT 172075
||
Sbjct 151155 TTT 151157
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905134461268800
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