Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1 197 4e-45 seq14 179 1e-39 seq8 134 4e-26 seq4 96.9 1e-14 seq5 89.7 2e-12 seq23 87.8 5e-12 >seq1 Length=2214157 Score = 197 bits (218), Expect = 4e-45 Identities = 350/510 (69%), Gaps = 3/510 (1%) Strand=Plus/Plus Query 156011 AATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACC 156067 || ||||| ||| ||| |||| |||||| |||||| |||| || || ||||| Sbjct 32070 AACATCAGCATGCCATGGTTCCAAATACATTGCAAAAGCACCAGGTCTTTTATTACCACC 32129 Query 156068 CTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGA 156127 ||||| ||||| | ||||| || || || |||| || ||| |||||||||||||| || Sbjct 32130 TTGATCAACATATCTTGCAGTATTGTTAAAAACACGTAACATTGGAATAATACCATTAGA 32189 Query 156128 AGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCC 156187 || ||||| || || ||||| ||||||| | || |||||||||||| || || Sbjct 32190 TGTACCATTTGTACCTGCAATATAAGAACCAGTACTTCTAATATTATGAATATGAAGACC 32249 Query 156188 AATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTC 156247 ||| || || | |||| |||||| ||| || |||| ||||| |||||||||| Sbjct 32250 AATTCCTCCAGCTGATTTTGAAATTAAAGCACAAGTTTTTAAAGTATCATAAATACCTTC 32309 Query 156248 AATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCC 156307 ||| ||||| |||| ||| | | ||| | || ||| | ||| ||| | || || || Sbjct 32310 AATTGAATCTTCTTTCATAGCAATAAGAAAACAAGAAGACATTTGTGGTTGAGGAGTACC 32369 Query 156308 AGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGT 156367 ||| || |||| || || | |||||| | ||||| || ||||| ||| || || Sbjct 32370 AGCATTAAATAAAGTGGGAGAAGCATGAGTGAAATATTTTAATGACATTAAATTATAGGT 32429 Query 156368 CTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATG 156427 || | | || |||| || | || ||||||| | || || ||||| | ||| Sbjct 32430 TTCAATGACTTTTTCAATATCATCACCATGAATACCAACAGCAACTCTCATAATTAAATG 32489 Query 156428 CTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTT 156487 || || | || ||| ||||||| || | |||||||| | ||| |||||||| Sbjct 32490 TTGTGGTCTTTCAGCAACTTTACCATCAAGTCTTAAAAGGTATGATCTTTCAAGAGTTTT 32549 Query 156488 AAACCCGAAATAATCAAACAGAAAATCACG 156517 ||| || || ||| | | | |||||||| Sbjct 32550 AAAACCAAAGAAATTATATTGGAAATCACG 32579 Score = 134 bits (148), Expect = 4e-26 Identities = 119/149 (80%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 233269 TGTAGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATC 233328 || |||||| | |||||| | |||||||||||||||||| |||| ||| ||||||||||| Sbjct 1944328 TGAAGCACCATAAGCAATAACACAATCACGTTCCATTTCCCCAAGACGAAGACCACCATC 1944387 Query 233329 ATTTGACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATA 233388 |||| ||||| | || |||||| |||||||||| |||||| || |||||| Sbjct 1944388 TCTTGATCTACCTTCTGTTGGTTGACGGGTTAAAACAGCTCTTGGTCCTCTAGCACGTGC 1944447 Query 233389 ATTAATTTTATCTTTAACCATATGCTTCA 233417 || |||||||| ||||||||||||||| Sbjct 1944448 ATGCATTTTATCCATAACCATATGCTTCA 1944476 Score = 111 bits (122), Expect = 5e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 233272 AGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATT 233331 |||||||||||||||||||||||||||||||||||| || | ||| || |||||||| | Sbjct 1732225 AGCACCGTGAGCAATCATACAATCACGTTCCATTTCTCCGAAACGAAGGCCACCATCTCT 1732284 Query 233332 TGACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATT 233391 ||| ||||| | |||| ||| | || || | | |||||| ||||||| | Sbjct 1732285 TGATCTACCTTCTACTGGTTGTCTTGTCAATATTTGTAGTGGACCTCTAGCACGAGCGTG 1732344 Query 233392 AATTTTATCTTTAACCATATGCTTCAGTCTCATATAATAACACGGACCAATAAATAGTT 233450 ||| ||||| | ||||||||| || ||| |||||| ||||||| |||| || Sbjct 1732345 AATCTTATCATCAACCATATGACGCAATCTTTGATAATATGTTGGACCAAAGAATACTT 1732403 Score = 87.8 bits (96), Expect = 5e-12 Identities = 112/151 (74%), Gaps = 4/151 (3%) Strand=Plus/Plus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 ||||||| |||||||| ||||||||||| ||||| || ||||| || || | Sbjct 1732580 TGGGCGACTGTCATACGTGAAGGAATAGCATGTGGATTAATAATGATATCAGGGCAGATA 1732639 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAATGTTTC--CAATAGTTCCCTTTT 251956 || ||||||| || || | ||| | | || ||| ||| | ||||||| ||||||| Sbjct 1732640 CCTTCAGCAGAAAATGGAACATCTTCATG-TCTATA-TGTCACACCAATAGTACCCTTTT 1732697 Query 251957 GTCCGTGACGAGAACTGAACTTATCACCAAT 251987 | |||||||||||| |||||||||||||| Sbjct 1732698 GACCGTGACGAGAAGCAAACTTATCACCAAT 1732728 Score = 84.2 bits (92), Expect = 6e-11 Identities = 91/118 (77%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 251424 ACACACATGGACGCTGTAAGCATCAGATGCGTC-ATATAGCCGACCCTTGGTGAAGCGAG 251482 ||| ||||||| || ||||||| ||||| || ||| || | | || ||| || Sbjct 1732165 ACAAACATGGATTCTAAAAGCATCCGATGCCTCCATA-AGTCTTTCTTTCAAGAAAGAAG 1732223 Query 251483 ATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATC 251540 |||||||| | ||||||||||||||| |||||||| ||||||||||| |||||||| Sbjct 1732224 CAGCACCGTGAGCAATCATACAATCACGTTCCATTTCTCCGAAACGAAGGCCACCATC 1732281 >seq14 Length=670130 Score = 179 bits (198), Expect = 1e-39 Identities = 405/595 (68%), Gaps = 19/595 (3%) Strand=Plus/Plus Query 133073 AGGTTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAACAGCAA 133132 || ||||| | |||||||||||| | ||||||| ||||| ||||||||||| || Sbjct 577716 AGATTTGTCCTCTTCCCAATTAAGTTCCACGAGATCTGGCAAATGTATAAAAAGGCTGAA 577775 Query 133133 GATTTATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGACCCAGCCCACTGGGAAGCC 133192 | | || |||||| | ||| | |||||| ||||| | | |||||| Sbjct 577776 GCATCTTTCTGGACTGCTGAAGAAATTGATTTAAGTAAAGATATTGGTGATTGGGAAAAT 577835 Query 133193 ---CTTACTGGGGATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGAGT 133249 |||| | ||||| ||||||||| | ||||| ||||| ||||| Sbjct 577836 AAGCTTAATAAAGATGAGCGTTTTTTTATTTCACGCGTCTTAGCCTTTTTCGCTGCTTCA 577895 Query 133250 GATGGTATTGTTCTTGAAAATTTAG--GAACACGGTTTATGGGAGAAGTTCAACTGGCCG 133307 |||||||||||| |||||||||| ||| || ||| || || |||||| | | Sbjct 577896 GATGGTATTGTTAACGAAAATTTAGTTGAAAAC--TTTTCGGCTGAGGTTCAAACACCAG 577953 Query 133308 AAGCCC-GTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATAT 133366 |||| |||| |||||||| | || || |||||||||||| || ||| |||||| Sbjct 577954 AAGCTAAGTGC-TTTTATGGTTTCCAAATCATGATGGAAAATATACACTCTGAGACATAT 578012 Query 133367 TCTACTCT-AATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACT---ATTCAA 133422 || ||| | |||||| || || || |||||| | | ||| || || | |||||| Sbjct 578013 TC-ACTATTAATTGACACATATATTAAAGATTC--TAAAGA-GCGTGAATTTTTATTCAA 578068 Query 133423 CGCCATTAGCGAAT-TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCC 133481 || ||| | ||| ||||||||||||| ||||| | || |||||| | | |||||| Sbjct 578069 TGCTATT-GAAAATGTTCCTTGTATTAAGAAGAAGGCAGATTGGGCTTTAAGATGGATTA 578127 Query 133482 AGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAttt 133541 || ||| || |||||| ||||| |||||||| |||| || || || |||| Sbjct 578128 GTGATAAGGAAGCATTATTTGCTGAACGTCTTGTTGCTTTCGCTGCTGTTGAAGGTATTT 578187 Query 133542 ttttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGAC 133601 ||||| |||| | ||| |||||||| ||| | |||||| | ||| | | || || | Sbjct 578188 TTTTCTCTGGTTCTTTCGCATCTATTTTCTGGTTAAAAAAGAGAGGTTTAATGCCAGGCC 578247 Query 133602 TGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGC 133656 | ||||||||| ||| | || | | || || | |||||||| || ||||| Sbjct 578248 TTACTTTTTCTAATGAATTGATCTGTCGTGATGAAGGTCTTCACACTGATTTTGC 578302 Score = 100 bits (110), Expect = 8e-16 Identities = 361/559 (65%), Gaps = 13/559 (2%) Strand=Plus/Minus Query 133073 AGGTTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAACAGCAA 133132 || ||||||||||| |||||||| | | || |||||||| ||||| || || || | Sbjct 212561 AGATTTGTTATGTTTCCAATTAAATATGGTGAAATTTGGCAAATGTACAAGAAGCACGAG 212502 Query 133133 GATTTATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGACCCAGCCCACTGGGAAGCC 133192 | || || |||||| || ||| | ||| | | || || | | ||||||| | Sbjct 212501 GCTTCCTTCTGGACTACAGAGGAAATTGATCTTGCTAAGGATATACCTGACTGGGA--CA 212444 Query 133193 CTTACT-----GGGGATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGA 133247 || | | | |||| | | ||||| || | | || || |||||||| || Sbjct 212443 CTAAGTTAAACGAAAATGAGAGATTCTTTATCTCAAGAGTATTGGCTTTTTTTGCAGCAT 212384 Query 133248 GTGATGGTATTGTTCTTGAAAATTTAG--GAACACGGTTTATGGGAGAAGTTCAACTGGC 133305 ||||||| ||||| ||||||||||| || || ||| | ||| |||||| | | Sbjct 212383 CTGATGGTCTTGTTAATGAAAATTTAGTTGAGAAC--TTTTCAGCAGAGGTTCAAATTCC 212326 Query 133306 CGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATA 133365 |||||| || |||||| | ||||| || |||||||| |||||| || || Sbjct 212325 TGAAGCCAAAAGTTTCTATGGGTTCCAGATCATGACAGAAAATATACATTCTGAAACTTA 212266 Query 133366 TTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACGC 133425 ||| | | ||||||||||| | ||| | | | || || || | || || Sbjct 212265 CTCTGTACAGTTAGATACTTACATTAGAGACCCTATTGAAAAAGACTTTCTTCTTAATGC 212206 Query 133426 CATTAGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGA 133485 ||| | | | || ||||| ||| |||| |||||||| || | |||||||| | || Sbjct 212205 AATTGTCAACATCCCATGTATCAAACAGAAGGCTGACTGGACTTTGAAATGGATTAACGA 212146 Query 133486 CAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAttttttt 133545 | | || |||| || | ||||||||||| | || || | ||||| Sbjct 212145 CGATGAAGCATTATTTGGGGAACGATTAGTTGCTTTTGCAACTATTGAAGGTGTATTTTT 212086 Query 133546 CAGTGGTGCGTTCTGCT-CTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGT 133604 | ||| | || |||| | || |||||| | |||||| | ||| | | ||||| | Sbjct 212085 CTCTGGATCATT-TGCTGCCATATTTTGGTTGAAAAAGAGAGGTTTAATGCCTGGTTTAA 212027 Query 133605 GTTTTTCTAACGAACTTAT 133623 |||||||| |||||||| Sbjct 212026 CCTTTTCTAATGAACTTAT 212008 >seq8 Length=1087023 Score = 134 bits (148), Expect = 4e-26 Identities = 343/519 (66%), Gaps = 16/519 (3%) Strand=Plus/Plus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 |||||||| ||||||| | ||| ||| ||||| | || | ||| ||||| | Sbjct 897426 CTATCAAATCTACCAGGTCTTAATAAAGCTTTATCTAAAACGTCAGGTCTATTTGTACCA 897485 Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGT--TAAAATTTGAT 288967 || || ||||||| | || ||| | ||| ||||| || || ||| | ||||| Sbjct 897486 GCTAAAACAACAACATGATCAGTTGTTTCAAAACCATC--TAATTCAACTAATAATTGAT 897543 Query 288968 TAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGA---ATCGCTCCttt 289024 | | ||| ||| ||||||||||| ||| | || || || | ||| Sbjct 897544 TTAAAGTTGCTTCTCTTTCATCATT---ACCAC------CAGCCATTTTATTATTTCTTG 897594 Query 289025 ttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAA 289084 |||||||| ||||||||||| |||| || | | | ||||| || | ||| Sbjct 897595 ATTTACCAATTGCATCAATTTCATCAACAAATACAATTGATGGAGATAATTCACGAGCAC 897654 Query 289085 TTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAG 289144 | |||||| |||| ||||| ||| |||| ||||||| ||||||| |||||||||| Sbjct 897655 GTTTAAATAAATCTCGAACACGACTTGCACCAACACCAACAAACATTTCAACAAATTCAG 897714 Query 289145 AAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTG 289204 || | ||||| | |||| ||||||||||| ||||| || | || | | | Sbjct 897715 AACCCGATACAGATAAAAATGGAACATTTGCTTCACCTGCAGTAGCTTTTGCTAATAAAG 897774 Query 289205 TCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAG 289264 | ||||| || || ||||| || ||| | | || |||| | |||||| || Sbjct 897775 TTTTACCAGTACCTGGTGGACCAGATAAAATTGCACCTCTTGGAATTTTTGCACCTAATT 897834 Query 289265 ACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCT 289324 | ||| || | || | |||||||||| |||| ||| | || ||| | |||||| | Sbjct 897835 TTTCATACTTTTTTGGATTTTTTAAAAATTGAACAAATTCTTGAATTTCTTCTTTTGCTT 897894 Query 289325 CATCACATCCTGCTACATCAGCAAAAGTAATATTAATAT 289363 ||||||| || || ||||| |||| | || ||||||| Sbjct 897895 CATCACAACCAGCAACATCTTTAAAATTCATTTTAATAT 897933 >seq4 Length=1434447 Score = 96.9 bits (106), Expect = 1e-14 Identities = 135/189 (71%), Gaps = 3/189 (2%) Strand=Plus/Plus Query 301764 GTTTAAATAAATAGTACAGGATGGATTCTTTGTGTTTTCCGATAGAGACAGAATTTCTTC 301823 || |||||||| ||| | | ||| |||| | |||| | | | ||||| || | Sbjct 667195 GTCTAAATAAACAGTTAAAGCAGGAGTCTTCATATTTTTAGCAACATTAAGAATCTCCTT 667254 Query 301824 AATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAAGTGGAAAGT 301883 || ||| |||||||| || || || || || | ||||||||| | ||||| || Sbjct 667255 AAGACGAGGAACACCTAATGTGACATTT---TTAGAGGATACACCAGCATAATGGAAGGT 667311 Query 301884 ATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCATACCAACCAT 301943 ||||| || | |||||||| ||| ||||||||| ||| || ||||| | ||||||||| Sbjct 667312 ATTCAATGTCATTTGAGTAGCTGGTTCACCAATAGATTGGGCTGCAATAACACCAACCAT 667371 Query 301944 TTCTCCTGG 301952 ||| ||||| Sbjct 667372 TTCACCTGG 667380 >seq5 Length=1301127 Score = 89.7 bits (98), Expect = 2e-12 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 219853 ATTTACTTGTTTTAAGTGTAAAGAAAATAAATGTACTTATTATCAATTACAAACACGTAG 219912 |||||| ||| |||||||||| | || ||| || |||||||||| | |||||||| || Sbjct 822172 ATTTACATGTGGTAAGTGTAAACAGAAGAAAGTTAGTTATTATCAAATGCAAACACGAAG 822113 Query 219913 TGCTGATGAGTCTATGACTACGTTTGTAACTTGTATTCCTTGTGGTAATAGATGGAA 219969 ||| ||||| || | ||||| ||| |||||| |||||| ||||||||||| Sbjct 822112 TGCCGATGAACCTTTAACTACTTTTTGTACTTGTGAAAATTGTGGCAATAGATGGAA 822056 >seq23 Length=348553 Score = 87.8 bits (96), Expect = 5e-12 Identities = 104/139 (75%), Gaps = 3/139 (2%) Strand=Plus/Minus Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874 ||||||| ||||| |||| |||| |||| || |||| | || || ||| ||||| Sbjct 75945 AATTTCTCTCATACGAGGAATACCAAGGGTAACATTAGCA--GCAC-CATGACCGGCAAA 75889 Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCAT 301934 ||||||||||| ||||| | ||| || | ||| |||||||| ||| || ||||| || Sbjct 75888 ATGGAAAGTATTAAGAGTCATTTGTGTGGATGGTTCACCAATTGATTGAGCAGCAATGAT 75829 Query 301935 ACCAACCATTTCTCCTGGT 301953 |||||| ||| |||||| Sbjct 75828 ACCAACAGCTTCACCTGGT 75810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471815035357832