Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq21 156 4e-33 seq8 152 5e-32 seq5 152 5e-32 seq12 131 2e-25 >seq21 Length=453462 Score = 156 bits (172), Expect = 4e-33 Identities = 166/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | || |||||||| |||||||| || || || || || ||| ||| Sbjct 371523 GATGCAGATTTTTGTCAAGACGCTAACGGGTAAAACCATCACTCTTGAGGTCGAATCCAG 371582 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| | || | || ||| ||||||||||||||| |||||||| || || ||||| Sbjct 371583 TGATACAATCGATAATGTTAAATCAAAGATCCAAGACAAGGAAGGAATTCCCCCAGATCA 371642 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||||| || ||||| || ||||| || || ||| | | | || ||||| || Sbjct 371643 ACAACGTTTAATTTTTGCTGGTAAACAACTAGAAGATGGTCGTACTTTATCTGATTACAA 371702 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 ||| |||||||| || || |||||||||| || |||| Sbjct 371703 CATCCAAAAGGAGTCTACCTTACACTTGGTTTTAAGATT 371741 >seq8 Length=1087023 Score = 152 bits (168), Expect = 5e-32 Identities = 169/223 (76%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 24700 TACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGC 24759 ||| ||||||||||| | ||||| | ||||||||||| ||||| ||||| || ||| | Sbjct 676916 TACAATGCAGATCTTCGTCAAAACCTTGACCGGTAAAACCATTACTCTCGAGGTTGAATC 676857 Query 24760 CACCGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCG 24818 | | ||||| | || || | ||| ||||| || |||||||| |||||||| ||||| | Sbjct 676856 CTCTGACACTATTGACAATGTTAAGTCAAAA-ATTCAAGACAAGGAAGGAATTCCTCCAG 676798 Query 24819 ATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATT 24878 | |||||| | || ||||||||||| ||||| | || || | | | | || || | Sbjct 676797 ACCAACAAAGATTAATCTTTGCCGGTAAACAATTAGAAGACGGACGTACCTTATCTGACT 676738 Query 24879 ATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 | ||||||||||||||||| || |||| ||||| ||| |||| Sbjct 676737 ACAACATTCAAAAGGAATCCACTTTACATTTGGTTTTGAGATT 676695 >seq5 Length=1301127 Score = 152 bits (168), Expect = 5e-32 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | ||||| || |||||||| |||||||| ||||| ||||| | | Sbjct 1173873 GATGCAGATTTTTGTCAAAACCCTTACCGGTAAGACTATTACCCTCGAGGTAGAGTCATC 1173814 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||| || | || | || || ||||||||| ||||| |||||||| ||||| || || Sbjct 1173813 CGATACTATTGACAATGTTAAGTCAAAGATCCAGGACAAGGAAGGAATCCCTCCAGACCA 1173754 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||||| |||||||| || || || | || ||| | | | || ||||| || Sbjct 1173753 ACAACGTTTAATCTTTGCTGGTAAGCAATTAGAAGATGGACGTACTTTATCTGATTACAA 1173694 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 ||| ||||||||||| || |||| ||||| ||| |||| Sbjct 1173693 CATCCAAAAGGAATCAACTTTACATTTGGTTTTGAGATT 1173655 >seq12 Length=712717 Score = 131 bits (144), Expect = 2e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| ||||||| || || || || || ||||| || || || || | | Sbjct 151151 ATGCAGATTTTTGTTAAAACCCTTACAGGGAAGACAATTACTCTTGAGGTTGAGTCATCT 151092 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| |||||| ||||| || || ||||| ||||| |||||| Sbjct 151091 GACACTATTGATAATGTCAAATCAAAGATTCAAGATAAGGAGGGAATTCCTCCAGATCAA 151032 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||||||||| ||||| || || || |||| ||| | | | | || || || ||| Sbjct 151031 CAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGATGGCCGTACCTTATCTGACTACAAC 150972 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 || ||||||||||| || |||| ||||| | ||||| | || || || Sbjct 150971 ATCCAAAAGGAATCAACTTTACATTTGGTTCTCAGATTGAGAGGTGGTGG 150922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896835174080