Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq21 156 4e-33
seq8 152 5e-32
seq5 152 5e-32
seq12 131 2e-25
>seq21
Length=453462
Score = 156 bits (172), Expect = 4e-33
Identities = 166/219 (76%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| ||| | || |||||||| |||||||| || || || || || ||| |||
Sbjct 371523 GATGCAGATTTTTGTCAAGACGCTAACGGGTAAAACCATCACTCTTGAGGTCGAATCCAG 371582
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| | || | || ||| ||||||||||||||| |||||||| || || |||||
Sbjct 371583 TGATACAATCGATAATGTTAAATCAAAGATCCAAGACAAGGAAGGAATTCCCCCAGATCA 371642
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||||||||| || ||||| || ||||| || || ||| | | | || ||||| ||
Sbjct 371643 ACAACGTTTAATTTTTGCTGGTAAACAACTAGAAGATGGTCGTACTTTATCTGATTACAA 371702
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
||| |||||||| || || |||||||||| || ||||
Sbjct 371703 CATCCAAAAGGAGTCTACCTTACACTTGGTTTTAAGATT 371741
>seq8
Length=1087023
Score = 152 bits (168), Expect = 5e-32
Identities = 169/223 (76%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 24700 TACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGC 24759
||| ||||||||||| | ||||| | ||||||||||| ||||| ||||| || ||| |
Sbjct 676916 TACAATGCAGATCTTCGTCAAAACCTTGACCGGTAAAACCATTACTCTCGAGGTTGAATC 676857
Query 24760 CACCGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCG 24818
| | ||||| | || || | ||| ||||| || |||||||| |||||||| ||||| |
Sbjct 676856 CTCTGACACTATTGACAATGTTAAGTCAAAA-ATTCAAGACAAGGAAGGAATTCCTCCAG 676798
Query 24819 ATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATT 24878
| |||||| | || ||||||||||| ||||| | || || | | | | || || |
Sbjct 676797 ACCAACAAAGATTAATCTTTGCCGGTAAACAATTAGAAGACGGACGTACCTTATCTGACT 676738
Query 24879 ATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
| ||||||||||||||||| || |||| ||||| ||| ||||
Sbjct 676737 ACAACATTCAAAAGGAATCCACTTTACATTTGGTTTTGAGATT 676695
>seq5
Length=1301127
Score = 152 bits (168), Expect = 5e-32
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| ||| | ||||| || |||||||| |||||||| ||||| ||||| | |
Sbjct 1173873 GATGCAGATTTTTGTCAAAACCCTTACCGGTAAGACTATTACCCTCGAGGTAGAGTCATC 1173814
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||| || | || | || || ||||||||| ||||| |||||||| ||||| || ||
Sbjct 1173813 CGATACTATTGACAATGTTAAGTCAAAGATCCAGGACAAGGAAGGAATCCCTCCAGACCA 1173754
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||||||||| |||||||| || || || | || ||| | | | || ||||| ||
Sbjct 1173753 ACAACGTTTAATCTTTGCTGGTAAGCAATTAGAAGATGGACGTACTTTATCTGATTACAA 1173694
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
||| ||||||||||| || |||| ||||| ||| ||||
Sbjct 1173693 CATCCAAAAGGAATCAACTTTACATTTGGTTTTGAGATT 1173655
>seq12
Length=712717
Score = 131 bits (144), Expect = 2e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| ||||||| || || || || || ||||| || || || || | |
Sbjct 151151 ATGCAGATTTTTGTTAAAACCCTTACAGGGAAGACAATTACTCTTGAGGTTGAGTCATCT 151092
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| |||||| ||||| || || ||||| ||||| ||||||
Sbjct 151091 GACACTATTGATAATGTCAAATCAAAGATTCAAGATAAGGAGGGAATTCCTCCAGATCAA 151032
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||||||||||| ||||| || || || |||| ||| | | | | || || || |||
Sbjct 151031 CAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGATGGCCGTACCTTATCTGACTACAAC 150972
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933
|| ||||||||||| || |||| ||||| | ||||| | || || ||
Sbjct 150971 ATCCAAAAGGAATCAACTTTACATTTGGTTCTCAGATTGAGAGGTGGTGG 150922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449896835174080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |