Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 2e-13 >seq1 Length=2214157 Score = 91.5 bits (100), Expect = 2e-13 Identities = 182/263 (69%), Gaps = 9/263 (3%) Strand=Plus/Minus Query 192405 CAATCTGCTCGAAACTGTTTTTATACTTCTATGGTTAAACAAGCCATTGGGTTTATTCCT 192464 |||||| |||| ||| || | | || |||||| ||||||||| || |||| | ||||| Sbjct 1733367 CAATCTCCTCGTAACACTTATCAATCTGCTATGGGTAAACAAGCTAT-GGGTGTGTTCCT 1733309 Query 192465 TGCCAC----AACTTAAAAACGGAAACAGTCTCTCATACATTAAATTATCCACAAAAACC 192520 | | | ||| | | || ||| ||| | | ||| | ||||||| || ||||| Sbjct 1733308 TACAAATTATAACGTCAGAATGGATACAATGGCAAATATTCTTTATTATCCTCAGAAACC 1733249 Query 192521 ACTTGTTACCACA-GATAT-TGCAAAATTTAATAAATTAGACGATTATCCAAATGGTATT 192578 | | | ||| ||| ||| | || || || | || ||||| | || ||| |||| Sbjct 1733248 ATTGGCTACAACACGATCTATGGAATTCTTGA-AATTTAGAGAACTA-CCAGCTGGTCAG 1733191 Query 192579 AATGCTATTGTTGCTATAGCTTGCTATACTGGCTATAACCAAGAAGACAGTATTATTTTA 192638 ||||| |||||||| || || || |||| ||| || ||||||||||| | ||||| | Sbjct 1733190 AATGCAATTGTTGCGATTGCCTGTTATAGTGGTTACAACCAAGAAGATTCTGTTATTATG 1733131 Query 192639 AATAAAGCTTCTATTGAAAGAGG 192661 ||| || | |||||| ||||| Sbjct 1733130 AATCAAAGTAGTATTGATAGAGG 1733108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628530131496960