Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq1 331 2e-85
seq4 132 1e-25
seq14 122 2e-22
seq25 87.8 4e-12
>seq1
Length=2214157
Score = 331 bits (366), Expect = 2e-85
Identities = 588/845 (70%), Gaps = 21/845 (2%)
Strand=Plus/Minus
Query 110307 TTTGGTTTCAAAACTCTTGAACGTGCTTA---TTTACTTCGTGTCAATGGCGAGATCATT 110363
|||||||| |||||||||||| | | || |||| | || |||| | | |
Sbjct 32558 TTTGGTTTTAAAACTCTTGAAAGATCATACCTTTTAAGACTTG---ATGGTAAAGTTGCT 32502
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
||| | || ||||| | || | | ||||| ||||||||||||| |||||||| ||
Sbjct 32501 GAAAGACCACAACATTTAATTATGAGAGTTGCTGTTGGTATTCATGGTGATGATATTGAA 32442
Query 110424 GCTGTTATTGAATGTTATGATGTATTAAG-TAAAAAGAAAGCTATTCATGCTACTCCTAC 110482
|| |||||| ||| || || | | |||| | | | ||||||| |||| ||
Sbjct 32441 AAAGTCATTGAAACCTATAATTTAATGTCATTAAAATATTTC-ACTCATGCTTCTCCCAC 32383
Query 110483 CCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAA 110542
||||||| || || ||| | | |||| || ||||||| |||||| | | || ||
Sbjct 32382 TTTATTTAATGCTGGTACTCCTCAACCACAAATGTCTTCTTGTTTTCTTATTGCTATGAA 32323
Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACT---GCTCTTATTTCTAA 110599
|| ||||| |||||||||||||||||| || ||||| |||| ||| | ||||| ||
Sbjct 32322 AGAAGATTCAATTGAAGGTATTTATGATACT-TTAAA--AACTTGTGCTTTAATTTCAAA 32266
Query 110600 AAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGC 110659
| |||||||||||||| |||| ||||| ||||| | | || | |||| ||
Sbjct 32265 ATCAGCTGGAGGAATTGGTCTTCATATTCATAATATTAGAAGTACTGGTTCTTATATTGC 32206
Query 110660 AACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGC 110719
| | || ||| | || | ||| || ||||||||||| | || || ||| | |||||
Sbjct 32205 AGGTACAAATGGTACATCTAATGGTATTATTCCAATGTTACGTGTTTTTAACAATACTGC 32146
Query 110720 AAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACC 110776
|| |||||| |||||||||| ||| ||| ||| | ||||| || ||| | |||||
Sbjct 32145 AAGATATGTTGATCAAGGTGGTAATAAAAGACCTGGTGCTTTTGCAATGTATTTGGAACC 32086
Query 110777 TTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACA 110836
|||||| | ||| | ||||| | | || || | |||||||| || ||||||
Sbjct 32085 ATGGCATGCTGATGTTTTTGATTATATTGATATTAGAAAAAATCATGGTAAAGAAGAAAT 32026
Query 110837 AAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCA 110896
|||||| | ||||||||| ||| | |||||||| |||||||| |||| | | ||| |
Sbjct 32025 TAGAGCAAGAGATTTATTTGCAGCATTATGGATTTCTGATTTATTTATGAGAAGAGTTGA 31966
Query 110897 AGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCT-CCTGGTCTATCTGATGTAT 110955
| ||||||| ||||| |||| | || | | | |||||||| || ||||| |
Sbjct 31965 ACAAAATGGTCAATGGTC-ATTATTTTCCCCAAATGAAGTCCCTGGTCTTTCAGATGTTT 31907
Query 110956 ATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAAC 111015
|||| | || ||||||| | || |||||||||||||||||||| || | |||
Sbjct 31906 ATGGTGATGAATTTGAAGCATTATATGAAAAATATGAAAAAGAAGGTAAAGCTGTTAAAA 31847
Query 111016 AAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTC 111075
|||| ||||||| ||||||||| ||| | ||| ||||| |||||||| | ||
Sbjct 31846 CAATTAAAGCTCAAAAACTTTGGTATTCAATTTTGGAAGCACAAACAGAAACTGGTATTC 31787
Query 111076 CTTATATTTTGTATAAAGAT-CATATTAATCGCAAATCTAATCAAATGAATTTAGGAACA 111134
| | ||| | ||||||||| ||| |||| ||| |||||||| ||| | || |||
Sbjct 31786 CATTTATGCTTTATAAAGATGCAT-GTAATAAAAAAAGTAATCAAAAAAATCTTGGTACA 31728
Query 111135 ATTAA 111139
|| ||
Sbjct 31727 ATAAA 31723
Score = 91.5 bits (100), Expect = 3e-13
Identities = 151/214 (71%), Gaps = 8/214 (4%)
Strand=Plus/Minus
Query 112581 ACAAAAGTTATTACACGTAACCTAAATAAAATTATTGACAAAACGACCTATCCAATTCAA 112640
||||||||| || ||||| |||||||||||||||| | | |||||| ||
Sbjct 31577 ACAAAAGTTGTTGTTCGTAATTTAAATAAAATTATTGATAGGAATTATTATCCAGTTATT 31518
Query 112641 AAAGCAAAACATTCTAATAACAAGCATAGACCAATTGGCATTGGCGTACAAGGATTAGCT 112700
|||||| | |||| |||| | ||||||||||||| | || || ||||| ||||||
Sbjct 31517 GAAGCAAGAAATTCAAATATGAGACATAGACCAATTGCTTTAGGTGTTCAAGGTTTAGCT 31458
Query 112701 GATGTATTTATGATGATGCGAATTCCTTTTGATTCTGACC--GTGCTAAATTCTTAA--A 112756
|||| |||||| | || | || |||||||| ||| |||||||| |||| |
Sbjct 31457 GATGCTTTTATGTGTCTTCGTTTACCATTTGATTC--ACCTGAAGCTAAATTATTAAACA 31400
Query 112757 TGAAAAGATTTTCGAAACAATCTATTTCGCTGCT 112790
| ||| |||| ||||| || ||| ||||||
Sbjct 31399 TTCAAATATTT--GAAACTATTTATCATGCTGCT 31368
>seq4
Length=1434447
Score = 132 bits (146), Expect = 1e-25
Identities = 154/204 (75%), Gaps = 4/204 (2%)
Strand=Plus/Minus
Query 305307 GACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGT 305366
||||||| | || ||||| ||| |||||||| | ||||| || || ||||||||||
Sbjct 669260 GACATTTAATGGATGATGATCCAGTTTTGTTCAATCGTCAACCTTCTCTACATAAAATGT 669201
Query 305367 CTATGATGGCTCATAAAGTCAAAGTATTAT-CTGGATT-GACATTTCGATTAAATGTAAG 305424
|||||||||||||| ||| |||| |||| | ||| |||||| |||||||| ||
Sbjct 669200 CTATGATGGCTCATCGAGTAAAAG--TTATGCCATATTCTACATTTAGATTAAATTTATC 669143
Query 305425 TGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCA 305484
|| | | ||||||||||| ||||||||||| |||||||||||| | || || || ||
Sbjct 669142 TGTCACTTCTCCTTATAATGCCGATTTTGATGGTGATGAAATGAATTTACACGTTCCACA 669083
Query 305485 ATCAAAGGTTACAATGACTGAATT 305508
|| | | |||| | |||||||
Sbjct 669082 GTCCGAAGAGACAAGGGCTGAATT 669059
>seq14
Length=670130
Score = 122 bits (134), Expect = 2e-22
Identities = 383/588 (65%), Gaps = 19/588 (3%)
Strand=Plus/Plus
Query 131431 CCTATTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATCTGTTGCGGCCTT 131490
||| || |||||||| ||||| | | | |||||||| || ||| || | ||
Sbjct 577724 CCTCTTCCCAATTAAGTTCCACGAGATCTGGCAAATGTATAAAAAGGCTGAAGCATCTTT 577783
Query 131491 CTGGACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAAAAATTAACCTT 131550
|||||||| |||||| || ||| | | |||||||||| |||||||||||| ||| |||
Sbjct 577784 CTGGACTGCTGAAGAAATTGATTTAAGTAAAGATATTGGTGATTGGGAAAA--TAAGCTT 577841
Query 131551 GAATGAAAAAGA------TTTTGTTTCCAAAGTTCTTGCATTCTTCGCCGGAAGTGATGG 131604
||| || | || |||| |||| || | || || ||||| | |||||
Sbjct 577842 -AATAAAGATGAGCGTTTTTTTATTTCACGCGTCTTAGCCTTTTTCGCTGCTTCAGATGG 577900
Query 131605 CATTGTTATTGAAAATCTTGTTATTAATTTCATTCAA--GAAATTGATATTCCTGAAGTA 131662
||||||| |||||| | ||| || || ||| || || | | || ||||
Sbjct 577901 TATTGTTAACGAAAATTTAGTTGAAAACTT--TTCGGCTGAGGTTCAAACACCAGAAGCT 577958
Query 131663 ACATCGTTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATTA 131722
| | || || || ||| | | ||| ||| || |||| |||||| ||
Sbjct 577959 AAGTGCTTTTATGGTTTCCAAATCATGATGGAAAATATACACTCTGAGACATATTCACTA 578018
Query 131723 TTGATTGAGAGTCTTGTTAAAAATG---AAGATGATAAAAATAAATTATTTGATGCTGTA 131779
|| ||||| | | ||||| || |||| | || | ||||| ||||| |
Sbjct 578019 TTAATTGACACATATATTAAAGATTCTAAAGAGCGTGAATTT---TTATTCAATGCTATT 578075
Query 131780 AATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGAT 131839
| || ||||| ||||| ||||| ||||| |||||| | | ||||||| ||| |
Sbjct 578076 GAAAATGTTCCTTGTATTAAGAAGAAGGCAGATTGGGCTTTAAGATGGATTAGTGATAAG 578135
Query 131840 TCCGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCA 131899
|| ||| || | | ||||| ||||| ||| |||||||||||| || || ||
Sbjct 578136 GAAGCATTATTTGCTGAACGTCTTGTTGCTTTCGCTGCTGTTGAAGGTATTTTTTTCTCT 578195
Query 131900 GGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTG 131959
||| ||||| |||| || ||| | || ||| | || || ||||| || || | ||
Sbjct 578196 GGTTCTTTCGCATCTATTTTCTGGTTAAAAAAGAGAGGTTTAATGCCAGGCCTTACTTTT 578255
Query 131960 TCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGCT 132007
|| ||| |||| |||| | ||||||| | || ||||| ||||||
Sbjct 578256 TCTAATGAATTGATCTGTCGTGATGAAGGTCTTCACACTGATTTTGCT 578303
>seq25
Length=284566
Score = 87.8 bits (96), Expect = 4e-12
Identities = 68/81 (84%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 305405 ACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAA 305464
|| ||| |||| |||| | ||| |||||| ||||||||||| ||||||||||| ||||||
Sbjct 83940 ACTTTTAGATTTAATGAATGTGTTTGTACACCTTATAATGCTGATTTTGATGGTGATGAA 83999
Query 305465 ATGAATATGCATGTACCTCAA 305485
|||||| | ||| |||| |||
Sbjct 84000 ATGAATTTACATATACCACAA 84020
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186810731978696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |