Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq21 136 3e-27
seq8 132 3e-26
seq12 114 8e-21
seq5 113 3e-20
>seq21
Length=453462
Score = 136 bits (150), Expect = 3e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||| || | ||| ||||| |||| || ||| ||||| ||||||||||| ||
Sbjct 371751 ACCACCTCTTAATCTTAAAACCAAGTGTAAGGTAGACTCCTTTTGGATGTTGTAATCAGA 371692
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || || | || || | |||||| || |||||||| ||||| || |||||| | ||
Sbjct 371691 TAAAGTACGACCATCTTCTAGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGGGG 371632
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||| ||||| || || || || ||||| || | || || || ||||| |
Sbjct 371631 AATTCCTTCCTTGTCTTGGATCTT-TGATTTAACATTATCGATTGTATCACTGGATTCGA 371573
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| |||| ||||| |||||||| |||| ||| || ||||| ||||||||
Sbjct 371572 CCTCAAGAGTGATGGTTTTACCCGTTAGCGTCTTGACAAAAATCTGCAT 371524
>seq8
Length=1087023
Score = 132 bits (146), Expect = 3e-26
Identities = 170/232 (73%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||| || | || |||||||||| |||| || ||||| |||||||| || ||
Sbjct 676685 ACCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGA 676744
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || ||| |||| || |||||||| |||||||| || || | || || ||| | ||
Sbjct 676745 TAAGGTACGTCCGTCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGG 676804
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700
| ||||| ||||| |||||| || | ||||| |||| ||||| ||||| |
Sbjct 676805 AATTCCTTCCTTGTCTTGAATTTT-TGACTTAACATTGTCAATAGTGTCAGAGGATTCAA 676863
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752
| || | || || |||||||| || || ||||| || ||||||||||| ||
Sbjct 676864 CCTCGAGAGTAATGGTTTTACCGGTCAAGGTTTTGACGAAGATCTGCATTGT 676915
>seq12
Length=712717
Score = 114 bits (126), Expect = 8e-21
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||||||||| | | |||||||||| ||| || ||||| |||||||| || |
Sbjct 150923 CACCACCTCTCAATCTGAGAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAGTCAG 150982
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| | || || | || |||||||| || || |||||||||||||| || |||||| | |
Sbjct 150983 ATAAGGTACGGCCATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAG 151042
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | || || || || ||| || || || |||| || | ||||| ||| ||
Sbjct 151043 GAATTCCCTCCTTATCTTGAATCTT-TGATTTGACATTATCAATAGTGTCAGATGACTCA 151101
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| |||| || || || || ||||| | ||||| ||||| ||||||||
Sbjct 151102 ACCTCAAGAGTAATTGTCTTCCCTGTAAGGGTTTTAACAAAAATCTGCAT 151151
>seq5
Length=1301127
Score = 113 bits (124), Expect = 3e-20
Identities = 170/238 (71%), Gaps = 3/238 (1%)
Strand=Plus/Plus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
|||||||||| || | || |||||||||| ||| || ||||| ||||||||||| |
Sbjct 1173644 CACCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAATCAG 1173703
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| | || ||| | || || ||||| || || ||||| || ||||| || || ||| | |
Sbjct 1173704 ATAAAGTACGTCCATCTTCTAATTGCTTACCAGCAAAGATTAAACGTTGTTGGTCTGGAG 1173763
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | ||||| ||||| || || || | ||||| ||| | || ||| ||| ||
Sbjct 1173764 GGATTCCTTCCTTGTCCTGGATCTT-TGACTTAACATTGTCAATAGTATCGGATGACTCT 1173822
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTGGTG 33757
|| || | || || || ||||| || | ||||| ||||| |||||||| ||||||
Sbjct 1173823 ACCTCGAGGGTAATAGTCTTACCGGTAAGGGTTTTGACAAAAATCTGCAT-CTTGGTG 1173879
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703455173120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |