Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq8 109 5e-19
seq5 105 6e-18
seq21 95.1 1e-14
seq12 95.1 1e-14
>seq8
Length=1087023
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970
|||||||||||||| | || || ||||||||||||||||| | |||||| ||
Sbjct 676700 CAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGATAAGGTACGTCCGTC 676759
Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030
||| | |||||||||| | |||||| | ||||| |||||||| || ||||| || ||
Sbjct 676760 TTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGAATTCCTTCCTTGTC 676819
Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090
||||||| || | | || | ||| || | | || || |||| || | ||
Sbjct 676820 TTGAATTTTTGACTTAACATTGTCAATAGTGTCAGAGGATTCAACCTCGAGAGTAATGGT 676879
Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|||||| |||| ||||| | ||| ||||||||
Sbjct 676880 TTTACCGGTCAAGGTTTTGACGAAGATCTGCAT 676912
>seq5
Length=1301127
Score = 105 bits (116), Expect = 6e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970
|||||||||||||| |||| || ||||| |||||||| || | ||||| |||
Sbjct 1173660 CAAAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAATCAGATAAAGTACGTCCATC 1173719
Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030
||| | || ||||| | | |||||| ||| ||||| |||||||| || ||||| || ||
Sbjct 1173720 TTCTAATTGCTTACCAGCAAAGATTAAACGTTGTTGGTCTGGAGGGATTCCTTCCTTGTC 1173779
Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090
|| ||| || | | || | |||||||| | ||| || |||| || | ||
Sbjct 1173780 CTGGATCTTTGACTTAACATTGTCAATAGTATCGGATGACTCTACCTCGAGGGTAATAGT 1173839
Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||| || || ||||| | |||||||||||
Sbjct 1173840 CTTACCGGTAAGGGTTTTGACAAAAATCTGCAT 1173872
>seq21
Length=453462
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 131912 AAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCT 131971
|||||||| |||| | | ||||| ||||| |||||||| || | ||||| ||||
Sbjct 371735 AAAACCAAGTGTAAGGTAGACTCCTTTTGGATGTTGTAATCAGATAAAGTACGACCATCT 371676
Query 131972 TCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCG 132031
|| || |||||||| | | | |||| ||| ||||||||||| || || ||||| || ||
Sbjct 371675 TCTAGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGGGGAATTCCTTCCTTGTCT 371616
Query 132032 GTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTT 132091
|| ||| ||| | | || | ||||| | | || || || | || | |||
Sbjct 371615 TGGATCTTTGATTTAACATTATCGATTGTATCACTGGATTCGACCTCAAGAGTGATGGTT 371556
Query 132092 TTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||| || || || || | |||||||||||
Sbjct 371555 TTACCCGTTAGCGTCTTGACAAAAATCTGCAT 371524
>seq12
Length=712717
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973
||||||||||| |||| || ||||| ||||||||||| | |||||| ||||||
Sbjct 150942 AACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAGTCAGATAAGGTACGGCCATCTTC 151001
Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033
| || ||||| | | | || | ||| |||||||||||||| || || || |||||
Sbjct 151002 CAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATTCCCTCCTTATCTTG 151061
Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093
||| ||| ||| | | || | ||| || | | ||| || || | || | || ||
Sbjct 151062 AATCTTTGATTTGACATTATCAATAGTGTCAGATGACTCAACCTCAAGAGTAATTGTCTT 151121
Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || || ||||| | |||||||||||
Sbjct 151122 CCCTGTAAGGGTTTTAACAAAAATCTGCAT 151151
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476610389760960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |