Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq8 109 5e-19 seq5 105 6e-18 seq21 95.1 1e-14 seq12 95.1 1e-14 >seq8 Length=1087023 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 |||||||||||||| | || || ||||||||||||||||| | |||||| || Sbjct 676700 CAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGATAAGGTACGTCCGTC 676759 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| | |||||||||| | |||||| | ||||| |||||||| || ||||| || || Sbjct 676760 TTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGAATTCCTTCCTTGTC 676819 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 ||||||| || | | || | ||| || | | || || |||| || | || Sbjct 676820 TTGAATTTTTGACTTAACATTGTCAATAGTGTCAGAGGATTCAACCTCGAGAGTAATGGT 676879 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||| |||| ||||| | ||| |||||||| Sbjct 676880 TTTACCGGTCAAGGTTTTGACGAAGATCTGCAT 676912 >seq5 Length=1301127 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 |||||||||||||| |||| || ||||| |||||||| || | ||||| ||| Sbjct 1173660 CAAAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAATCAGATAAAGTACGTCCATC 1173719 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| | || ||||| | | |||||| ||| ||||| |||||||| || ||||| || || Sbjct 1173720 TTCTAATTGCTTACCAGCAAAGATTAAACGTTGTTGGTCTGGAGGGATTCCTTCCTTGTC 1173779 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 || ||| || | | || | |||||||| | ||| || |||| || | || Sbjct 1173780 CTGGATCTTTGACTTAACATTGTCAATAGTATCGGATGACTCTACCTCGAGGGTAATAGT 1173839 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| || || ||||| | ||||||||||| Sbjct 1173840 CTTACCGGTAAGGGTTTTGACAAAAATCTGCAT 1173872 >seq21 Length=453462 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 131912 AAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCT 131971 |||||||| |||| | | ||||| ||||| |||||||| || | ||||| |||| Sbjct 371735 AAAACCAAGTGTAAGGTAGACTCCTTTTGGATGTTGTAATCAGATAAAGTACGACCATCT 371676 Query 131972 TCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCG 132031 || || |||||||| | | | |||| ||| ||||||||||| || || ||||| || || Sbjct 371675 TCTAGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGGGGAATTCCTTCCTTGTCT 371616 Query 132032 GTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTT 132091 || ||| ||| | | || | ||||| | | || || || | || | ||| Sbjct 371615 TGGATCTTTGATTTAACATTATCGATTGTATCACTGGATTCGACCTCAAGAGTGATGGTT 371556 Query 132092 TTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| || || || || | ||||||||||| Sbjct 371555 TTACCCGTTAGCGTCTTGACAAAAATCTGCAT 371524 >seq12 Length=712717 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||||||||||| |||| || ||||| ||||||||||| | |||||| |||||| Sbjct 150942 AACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAGTCAGATAAGGTACGGCCATCTTC 151001 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | || ||||| | | | || | ||| |||||||||||||| || || || ||||| Sbjct 151002 CAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATTCCCTCCTTATCTTG 151061 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||| ||| ||| | | || | ||| || | | ||| || || | || | || || Sbjct 151062 AATCTTTGATTTGACATTATCAATAGTGTCAGATGACTCAACCTCAAGAGTAATTGTCTT 151121 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || ||||| | ||||||||||| Sbjct 151122 CCCTGTAAGGGTTTTAACAAAAATCTGCAT 151151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610389760960