Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq8 127 2e-24
seq21 122 8e-23
seq5 116 3e-21
seq12 98.7 9e-16
>seq8
Length=1087023
Score = 127 bits (140), Expect = 2e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | ||| ||||| ||||||||||| || ||||||||||||||||| || |
Sbjct 676686 CCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGAT 676745
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
||||| || |||| || | || ||||| ||||| || || | || ||||| | ||||
Sbjct 676746 AAGGTACGTCCGTCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGA 676805
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
| | ||||||| | ||| ||||| ||| | | | | | ||||| ||||| ||
Sbjct 676806 ATTCCTTCCTTGT-CTTGAATTTTTGACTTAACATTGTCAATAGTGTCAGAGGATTCAAC 676864
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737
||| | || || |||||||| ||||| ||||| || || |||||||||
Sbjct 676865 CTCGAGAGTAATGGTTTTACCGGTCAAGGTTTTGACGAAGATCTGCATT 676913
>seq21
Length=453462
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | ||| || || ||||| ||||| ||| ||||||||| ||||||||||| |
Sbjct 371750 CCACCTCTTAATCTTAAAACCAAGTGTAAGGTAGACTCCTTTTGGATGTTGTAATCAGAT 371691
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || | || || || || ||||| ||||| || || || || || || | |||
Sbjct 371690 AAAGTACGACCATCTTCTAGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGGGGA 371631
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | |||||||| ||||||| || | | | | | || || || ||||| |||
Sbjct 371630 ATTCCTTCCTTGTCTTGGATCTTTGATTTAACATTATCGATTGTATCACTGGATTCGACC 371571
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | ||||| ||||||||||| | || || ||||| ||||||||
Sbjct 371570 TCAAGAGTGATGGTTTTACCCGTTAGCGTCTTGACAAAAATCTGCAT 371524
>seq5
Length=1301127
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | ||| ||||| ||||||||||| || |||||||| ||||||||||| |
Sbjct 1173646 CCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAATCAGAT 1173705
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || | || || | |||||||| ||||| || || || || ||||| | |||
Sbjct 1173706 AAAGTACGTCCATCTTCTAATTGCTTACCAGCAAAGATTAAACGTTGTTGGTCTGGAGGG 1173765
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||||||||| ||||||| ||| | | | | | || ||| || || |||
Sbjct 1173766 ATTCCTTCCTTGTCCTGGATCTTTGACTTAACATTGTCAATAGTATCGGATGACTCTACC 1173825
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | || || || ||||| || | ||||| ||||| ||||||||
Sbjct 1173826 TCGAGGGTAATAGTCTTACCGGTAAGGGTTTTGACAAAAATCTGCAT 1173872
>seq12
Length=712717
Score = 98.7 bits (108), Expect = 9e-16
Identities = 165/238 (69%), Gaps = 3/238 (1%)
Strand=Plus/Plus
Query 35503 TTTATTTCCACCACGT---AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTT 35559
||| || ||||||| | || || | ||||||||||| || |||||||| |||||
Sbjct 150915 TTTCTTACCACCACCTCTCAATCTGAGAACCAAATGTAAAGTTGATTCCTTTTGGATGTT 150974
Query 35560 GTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTG 35619
||| || | ||||| || | || |||| |||||||| ||||| ||||| || || ||
Sbjct 150975 GTAGTCAGATAAGGTACGGCCATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTG 151034
Query 35620 GTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCT 35679
|| | ||||| | |||||| || |||||| || | | | | | |||||
Sbjct 151035 ATCTGGAGGAATTCCCTCCTTATCTTGAATCTTTGATTTGACATTATCAATAGTGTCAGA 151094
Query 35680 CGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737
|| || ||||| | || || || || || || | ||||| ||||| |||||||||
Sbjct 151095 TGACTCAACCTCAAGAGTAATTGTCTTCCCTGTAAGGGTTTTAACAAAAATCTGCATT 151152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450792833650880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |