Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq8 150 2e-31
seq12 129 6e-25
seq21 113 5e-20
seq5 96.9 4e-15
seq9 91.5 1e-13
seq14 89.7 5e-13
>seq8
Length=1087023
Score = 150 bits (166), Expect = 2e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| | || ||| || | |||| ||||||||||||||||||||||||||
Sbjct 676686 CCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGAT 676745
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| || | ||||| || ||||| || || | || || || || ||
Sbjct 676746 AAGGTACGTCCGTCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGA 676805
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || |||||||||||| || || ||| | ||||| || ||||| ||
Sbjct 676806 ATTCCTTCCTTGTCTTGAATTTTTGACTTAACATTGTCAATAGTGTCAGAGGATTCAACC 676865
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
||||||||||||||||||||||| || ||||| ||||| || ||||||
Sbjct 676866 TCGAGAGTAATGGTTTTACCGGTCAAGGTTTTGACGAAGATCTGCATT 676913
>seq12
Length=712717
Score = 129 bits (142), Expect = 6e-25
Identities = 159/216 (74%), Gaps = 1/216 (0%)
Strand=Plus/Plus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570
|||| || ||||||||||| ||||||||||| | ||| | || || | ||
Sbjct 150949 TGTAAAGTTGATTCCTTTTGGATGTTGTAGTCAGATAAGGTACGGCCATCTTCCAATTGC 151008
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || |||||||||||||| || ||||| || || || || || || |||||||| |||
Sbjct 151009 TTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATTCCCTCCTTATCTTGAATCTTT 151068
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
|||||| || | ||||| || || || || || |||||||| || || || ||
Sbjct 151069 GATTTGACATTATCAATAGTGTCAGATGACTCAACCTCAAGAGTAATTGTCTTCCCTGTA 151128
Query 134691 AAAGTTTTAACGAAAATTTGCATTTTGTTTTTGTTC 134726
| |||||||| ||||| |||||||| |||||||||
Sbjct 151129 AGGGTTTTAACAAAAATCTGCATTTT-TTTTTGTTC 151163
>seq21
Length=453462
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| | || || || | ||||| || || |||||||| |||||||| ||
Sbjct 371750 CCACCTCTTAATCTTAAAACCAAGTGTAAGGTAGACTCCTTTTGGATGTTGTAATCAGAT 371691
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || || || || || ||||| || |||||||| ||||| || ||||| || ||
Sbjct 371690 AAAGTACGACCATCTTCTAGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGGGGA 371631
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || ||||| || ||| ||| || || | ||| || ||||| ||
Sbjct 371630 ATTCCTTCCTTGTCTTGGATCTTTGATTTAACATTATCGATTGTATCACTGGATTCGACC 371571
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| ||||| ||||||||||| |||| || || || ||||| |||||
Sbjct 371570 TCAAGAGTGATGGTTTTACCCGTTAGCGTCTTGACAAAAATCTGCAT 371524
>seq5
Length=1301127
Score = 96.9 bits (106), Expect = 4e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| | || ||| || | |||| || ||||||||||| |||||||| ||
Sbjct 1173646 CCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAATCAGAT 1173705
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | || || | || || || ||||| || ||||| || || || || ||
Sbjct 1173706 AAAGTACGTCCATCTTCTAATTGCTTACCAGCAAAGATTAAACGTTGTTGGTCTGGAGGG 1173765
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || || || || ||| || || ||| | || ||||| || || ||
Sbjct 1173766 ATTCCTTCCTTGTCCTGGATCTTTGACTTAACATTGTCAATAGTATCGGATGACTCTACC 1173825
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| ||||| || |||||||| | ||||| || ||||| ||||| |||
Sbjct 1173826 TCGAGGGTAATAGTCTTACCGGTAAGGGTTTTGACAAAAATCTGCATCTTG 1173876
>seq9
Length=949999
Score = 91.5 bits (100), Expect = 1e-13
Identities = 91/118 (77%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 134598 TCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGAC 134657
|| || || || ||||| || || |||||||| |||||| ||| | || |||||
Sbjct 831606 TCTGGGGGAATTCCTTCCTTATCCTGAATTTTGGATTTGACGTTGTCAATAGTATCGGAT 831665
Query 134658 GATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTT 134715
||||| || || | || || |||||||||||||| ||||| ||||||||||||||||
Sbjct 831666 GATTCAACTTCTAAGGTGATAGTTTTACCGGTTAACGTTTTGACGAAAATTTGCATTT 831723
>seq14
Length=670130
Score = 89.7 bits (98), Expect = 5e-13
Identities = 148/210 (70%), Gaps = 4/210 (2%)
Strand=Plus/Plus
Query 21443 TTTCAAAGAAATTTGTTTTTCCTTCTAGTGCAATGTTTTTCATAAAATTAAAAGGATTGC 21502
||||||||||||| || || || | || | ||| |||| |||||| | ||||||||
Sbjct 211703 TTTCAAAGAAATTAGTCTTACCAACAAGAGAAATATTTTCCATAAAGTCGAAAGGATTTG 211762
Query 21503 TGGCGTAAAAACACCTTTCTTCGTT--CAATTCCACGCACAAACGATCCGCCACGAATTC 21560
| || | | || |||||| || || ||| | ||| ||| | ||| || || ||||
Sbjct 211763 TAGCATCATAA-ACCTTT-TTATTTCCCAAAGCAACGAGCAATCTATCAGCAACATATTC 211820
Query 21561 AATGTATTGACACATGCTGTCGCAATTCATGCCCAACAGATCGACCGGTAGCGCTTCGGT 21620
||||||||||||||| |||||||||||| || | | ||| || || || |||||
Sbjct 211821 AATGTATTGACACATCAAGTCGCAATTCATACCAAGTAATGAGACAGGAAGAGCCTCGGT 211880
Query 21621 GAAAAACTCCTTCTCGATAGCCACCGCTTC 21650
|| | || || || || | || |||||
Sbjct 211881 AAAGTATTCTTTTTCAATCACAACAGCTTC 211910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505397540822720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |