Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq8 150 2e-31 seq12 129 6e-25 seq21 113 5e-20 seq5 96.9 4e-15 seq9 91.5 1e-13 seq14 89.7 5e-13 >seq8 Length=1087023 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| | || ||| || | |||| |||||||||||||||||||||||||| Sbjct 676686 CCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGAT 676745 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| || | ||||| || ||||| || || | || || || || || Sbjct 676746 AAGGTACGTCCGTCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGA 676805 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || |||||||||||| || || ||| | ||||| || ||||| || Sbjct 676806 ATTCCTTCCTTGTCTTGAATTTTTGACTTAACATTGTCAATAGTGTCAGAGGATTCAACC 676865 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 ||||||||||||||||||||||| || ||||| ||||| || |||||| Sbjct 676866 TCGAGAGTAATGGTTTTACCGGTCAAGGTTTTGACGAAGATCTGCATT 676913 >seq12 Length=712717 Score = 129 bits (142), Expect = 6e-25 Identities = 159/216 (74%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 |||| || ||||||||||| ||||||||||| | ||| | || || | || Sbjct 150949 TGTAAAGTTGATTCCTTTTGGATGTTGTAGTCAGATAAGGTACGGCCATCTTCCAATTGC 151008 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || |||||||||||||| || ||||| || || || || || || |||||||| ||| Sbjct 151009 TTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATTCCCTCCTTATCTTGAATCTTT 151068 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 |||||| || | ||||| || || || || || |||||||| || || || || Sbjct 151069 GATTTGACATTATCAATAGTGTCAGATGACTCAACCTCAAGAGTAATTGTCTTCCCTGTA 151128 Query 134691 AAAGTTTTAACGAAAATTTGCATTTTGTTTTTGTTC 134726 | |||||||| ||||| |||||||| ||||||||| Sbjct 151129 AGGGTTTTAACAAAAATCTGCATTTT-TTTTTGTTC 151163 >seq21 Length=453462 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| | || || || | ||||| || || |||||||| |||||||| || Sbjct 371750 CCACCTCTTAATCTTAAAACCAAGTGTAAGGTAGACTCCTTTTGGATGTTGTAATCAGAT 371691 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || || || || ||||| || |||||||| ||||| || ||||| || || Sbjct 371690 AAAGTACGACCATCTTCTAGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGGGGA 371631 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || ||||| || ||| ||| || || | ||| || ||||| || Sbjct 371630 ATTCCTTCCTTGTCTTGGATCTTTGATTTAACATTATCGATTGTATCACTGGATTCGACC 371571 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| ||||||||||| |||| || || || ||||| ||||| Sbjct 371570 TCAAGAGTGATGGTTTTACCCGTTAGCGTCTTGACAAAAATCTGCAT 371524 >seq5 Length=1301127 Score = 96.9 bits (106), Expect = 4e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| | || ||| || | |||| || ||||||||||| |||||||| || Sbjct 1173646 CCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAATCAGAT 1173705 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || || | || || || ||||| || ||||| || || || || || Sbjct 1173706 AAAGTACGTCCATCTTCTAATTGCTTACCAGCAAAGATTAAACGTTGTTGGTCTGGAGGG 1173765 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || || || ||| || || ||| | || ||||| || || || Sbjct 1173766 ATTCCTTCCTTGTCCTGGATCTTTGACTTAACATTGTCAATAGTATCGGATGACTCTACC 1173825 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| ||||| || |||||||| | ||||| || ||||| ||||| ||| Sbjct 1173826 TCGAGGGTAATAGTCTTACCGGTAAGGGTTTTGACAAAAATCTGCATCTTG 1173876 >seq9 Length=949999 Score = 91.5 bits (100), Expect = 1e-13 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 134598 TCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGAC 134657 || || || || ||||| || || |||||||| |||||| ||| | || ||||| Sbjct 831606 TCTGGGGGAATTCCTTCCTTATCCTGAATTTTGGATTTGACGTTGTCAATAGTATCGGAT 831665 Query 134658 GATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTT 134715 ||||| || || | || || |||||||||||||| ||||| |||||||||||||||| Sbjct 831666 GATTCAACTTCTAAGGTGATAGTTTTACCGGTTAACGTTTTGACGAAAATTTGCATTT 831723 >seq14 Length=670130 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/210 (70%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 21443 TTTCAAAGAAATTTGTTTTTCCTTCTAGTGCAATGTTTTTCATAAAATTAAAAGGATTGC 21502 ||||||||||||| || || || | || | ||| |||| |||||| | |||||||| Sbjct 211703 TTTCAAAGAAATTAGTCTTACCAACAAGAGAAATATTTTCCATAAAGTCGAAAGGATTTG 211762 Query 21503 TGGCGTAAAAACACCTTTCTTCGTT--CAATTCCACGCACAAACGATCCGCCACGAATTC 21560 | || | | || |||||| || || ||| | ||| ||| | ||| || || |||| Sbjct 211763 TAGCATCATAA-ACCTTT-TTATTTCCCAAAGCAACGAGCAATCTATCAGCAACATATTC 211820 Query 21561 AATGTATTGACACATGCTGTCGCAATTCATGCCCAACAGATCGACCGGTAGCGCTTCGGT 21620 ||||||||||||||| |||||||||||| || | | ||| || || || ||||| Sbjct 211821 AATGTATTGACACATCAAGTCGCAATTCATACCAAGTAATGAGACAGGAAGAGCCTCGGT 211880 Query 21621 GAAAAACTCCTTCTCGATAGCCACCGCTTC 21650 || | || || || || | || ||||| Sbjct 211881 AAAGTATTCTTTTTCAATCACAACAGCTTC 211910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397540822720