Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1 684 0.0 seq14 298 8e-76 >seq1 Length=2214157 Score = 684 bits (758), Expect = 0.0 Identities = 1419/2099 (68%), Gaps = 31/2099 (1%) Strand=Plus/Plus Query 68367 ATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGT 68426 ||| | |||||| || || | | || || | || || | || ||| ||||| || || Sbjct 30726 ATCAATTGTAAATTGTATAGCAGCAGAAGCAGCTTGAGTTCTTAAATAATACATTCCAGT 30785 Query 68427 TTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATC 68486 ||| | |||| |||| || || |||||||||||||||| ||| ||||| Sbjct 30786 TTTTAAACCTTTTTTCCAGCCATAAAAATGCATACTTGTTAATTTCCCCATTGTTGGAGA 30845 Query 68487 GGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCAT 68546 |||| |||||| | ||||| |||||| || ||||| | | ||| || || | Sbjct 30846 TTTAATATAAATATTAAGAGATTGTGATTGATCAATAAAAGCAGCACGATCAGCAGCTAA 30905 Query 68547 TTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATC 68606 | ||||| | ||||| | | |||||||| ||| ||| | | | ||| || | | Sbjct 30906 ATCAATAATTGTTTTTTGTGATAATTCCCAAACAGTTTTATATAAATCTTTAATTTTTTG 30965 Query 68607 TGGAAGGCTCG---TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTC 68663 ||| | | ||||| ||| |||||| ||| |||||| || | || || Sbjct 30966 TGGTATCAATGGGATATTTGCAATTGATCCATTATCACTAATAATTTTACTTTTAATTGA 31025 Query 68664 ATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAA 68723 ||||||||| | | || |||| || | | | |||||||| |||||||| Sbjct 31026 ATCATTCCATATACCTAAATCAACTAAATCTTTTAATAACCATGGATTAACAATTTGAAA 31085 Query 68724 TTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATT 68783 ||| || | ||| ||||| | | | |||||||| ||||||||||| | | ||||||| Sbjct 31086 TTCACCTGCTAAAACTCTTCTACTATAAATATTTGAAGTATATGGTTCAAAACATTCATT 31145 Query 68784 ATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCT 68843 | ||| |||||||| | |||||||| |||||||| ||||| || | | |||||| Sbjct 31146 AAATCCAAGAATTTGTGATGTTGATGCTGTTGGCATTGGTGCAACAAGAAGTGAATTTCT 31205 Query 68844 AAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTAC 68903 | ||||| | || ||||| | ||| | | |||||||||||| |||| |||| Sbjct 31206 TAAACCATATTTTGACATTTTTTGTTTCAATAAATCCCAATCCCAAAGTTCAGTTGGTTG 31265 Query 68904 AACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTC 68963 ||||||||| | ||| ||||||| ||| || | | || |||||| | ||| ||||| Sbjct 31266 AACATTCCATAAATCATATTGTAAAATACCTTGAGATGTTGGTGATCCTTCATAAGTTTC 31325 Query 68964 ATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGT 69023 ||| |||||| | || |||| |||||| ||| || | ||| | | |||||| || Sbjct 31326 ATATGGTCCTAATTCTTTTGCTAATTCACATGATGCTTCAACAGCAGCATGATAAATAGT 31385 Query 69024 TTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAG 69083 ||| || || | | || | || ||||| | ||| ||||| || | | | Sbjct 31386 TTCAAATATTTGAATGTTTAATAATTTAGCTTCAGGTGAATCAAATGGTAAACGAAGACA 31445 Query 69084 AATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGA 69143 ||||| ||||| || || || ||||| || | | | || |||||||||||| ||||||| Sbjct 31446 CATAAAAGCATCAGCTAAACCTTGAACACCTAAAGCAATTGGTCTATGTCTCATATTTGA 31505 Query 69144 ACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGAC 69203 | || ||||| || ||||||||||| |||| ||||||||||| | ||| || || Sbjct 31506 ATTTCTTGCTTCAATAACTGGATAATAATTCCTATCAATAATTTTATTTAAATTACGAAC 31565 Query 69204 TACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCA-------AATCGTC--CATCTAT 69254 || ||||| | || | ||||| |||||| | || ||| | || || Sbjct 31566 AACAACTTTTGTAATATCATGAAGTTTTTGAAAATTATAAATTGAAACGTTATCTTCAAT 31625 Query 69255 AACAA-ACATATTC--AGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATT 69311 | ||| | || || | ||||| ||||||| ||| ||||| || || |||| | Sbjct 31626 ATCAATAAATGTTGGTAATGCTAATGATGCTAAATTGCAAACAGCAACTTCATCGGGTGC 31685 Query 69312 TGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTG 69371 | ||||| | || || ||||| ||| || ||| || || || ||||||| || Sbjct 31686 AGAATATTCAACAATTTCACAACATAAATTTGAACTTTTTATTGTACCAAGATTTTTTTG 31745 Query 69372 ATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTG 69431 |||||| ||||| ||||| || || || ||||| ||||| ||| |||||||||| | || Sbjct 31746 ATTACTTTTTTTATTACATGCATCTTTATAAAGCATAAATGGAATACCAGTTTCTGTTTG 31805 Query 69432 AGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAAC-GCTTC- 69489 | ||| | ||| || | ||||| ||| || ||| || |||| |||| Sbjct 31806 TGCTTCCAAAATTGAATACCAAAGTTTTTGAGCTTTAATTG-----TTTTAACAGCTTTA 31860 Query 69490 ---TCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAAT 69546 ||||||||||||| | ||||| ||| |||||||| || ||||||| | Sbjct 31861 CCTTCTTTTTCATATTTTTCATATAATGCTTCAAATTCATCACCATAAACATCTGAAAGA 31920 Query 69547 CCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATA 69606 ||||| ||||||||| | | |||||||| | ||| | | ||||| | ||||| Sbjct 31921 CCAGGGACTTCATTTGGGGAAAATAATGACCATTGACCATTTTGTTCAACTCTTCTCATA 31980 Query 69607 AATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCT 69666 |||| ||| | |||||| | ||| ||| | |||||| | |||| ||||||| || || Sbjct 31981 AATAAATCAGAAATCCATAATGCTGCAAATAAATCTCTTGCTCTAATTTCTTCTTTACCA 32040 Query 69667 GTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 69726 ||||||| ||| ||| | | | || | || ||||| |||||||||||| | ||| || Sbjct 32041 TGATTTTTTCTAATATCAATATAATCAAAAACATCAGCATGCCATGGTTCCAAATACATT 32100 Query 69727 GCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAG 69786 || | | || |||| |||||| || || ||||| | ||||| ||||| || ||| | Sbjct 32101 GCAAAAGCACCAGGTCTTTTATTACCACCTTGATCAACATATCTTGCAGTATTGTTAAAA 32160 Query 69787 ACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCT 69846 || | | ||| |||||||||||||||||| |||||||||| || | ||||||| || Sbjct 32161 ACACGTAACATTGGAATAATACCATTAGATGTACCATTTGTACCTGCAATATAAGAACCA 32220 Query 69847 CTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 69906 | | ||||||| |||| ||||| |||||||| || ||| || |||| |||| Sbjct 32221 GTACTTCTAATATTATGAATATGAAGACCAATTCCTCCAGCTGATTTTGAAATTAAAGCA 32280 Query 69907 CAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAA 69966 ||| ||| || || ||||| ||||| || || ||| ||| |||| || ||||||| Sbjct 32281 CAAGTTTTTAAAGTATCATAAATACCTTCAATTGAATCTTCTTTCATAGCAATAAGAAAA 32340 Query 69967 CAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTG 70026 || ||||||||| | || ||| || ||||||||||| || ||||| || |||||| Sbjct 32341 CAAGAAGACATTTGTGGTTGAGGAGTACCAGCATTAAATAAAGTGGGAGAAGCATGAGTG 32400 Query 70027 AACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTGATG 70085 || ||||| || | | ||| || |||||||| || ||| ||||| ||| ||| Sbjct 32401 AAATATTTTAATGACATTAAATTATAGGTTTCAATGACTTTTTCAATATCATCAC-CATG 32459 Query 70086 AATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTAT 70145 ||| || | || || | ||| | | ||| || |||| ||| | |||| || | Sbjct 32460 AATACCAACAGCAACTCTCATAATTAAATGTTGTGGTCTTTCAGCAACTTTACCATCAAG 32519 Query 70146 TTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCT 70205 | | || ||||||||| |||| ||||||||||| ||||| | || ||| || || | Sbjct 32520 TCTTAAAAGGTATGATCTTTCAAGAGTTTTAAAACCAAAGAAATTATATTGGAAATCACG 32579 Query 70206 TTCGTAAATAATAACAGAATTTAGTTTATCCTTAT-ATTTGGTAACTATATCCATAACAG 70264 || ||| ||| |||| || |||| ||| || | | | ||| | || |||| Sbjct 32580 ATCAAAAACAATTGCAGAGTTAAGTTCATCGGCATGACGTTG-AACAACAT-CATAGGTT 32637 Query 70265 T-AGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCT 70323 | |||| | || |||| ||| ||| || | ||||| | ||||| | |||| | Sbjct 32638 TCTTGTGATACCATTGGAGCAGCTTTCCCAGTTCTTGGATTTATATAGTGGTATAATTTA 32697 Query 70324 TCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTG 70383 || || | | ||| |||| | |||| || || | ||| || | || ||||| Sbjct 32698 CTGATAACTTGAGAGAATTGTTTAGTGGTTTGTTTATGGAGATTGGAGACAGCAATTCTA 32757 Query 70384 GCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGC 70442 || |||| || ||||| |||||||| ||||| | ||| || |||| ||||| Sbjct 32758 GCAGCTAAGATGGCATAATCAGGATGAATAGTAGTCATATAAGCAGCAGTTTCGGCAGC 32816 >seq14 Length=670130 Score = 298 bits (330), Expect = 8e-76 Identities = 617/906 (68%), Gaps = 24/906 (3%) Strand=Plus/Plus Query 39310 TGACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCC 39369 || |||||| || | ||||| || || ||| | || || || |||||||| || || Sbjct 211665 TGCCATAACACCTGTCTTTTGATAATCTGAAACTCTCTTTTCAAAGAAATTAGTCTTACC 211724 Query 39370 TTCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAA 39429 | | || ||||||||||| || || || ||||| || |||| ||| |||||| Sbjct 211725 AACAAGAGAAATATTTTCCATAAAGTCGAAAGGATTTGTAGCATCATAAACCTTTTTATT 211784 Query 39430 TCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACA 39489 ||| || | | ||||||||| |||||| |||| |||||| ||||| || || Sbjct 211785 TCCCAAAGCAACGAGCAATCTATCAGCAACATATTCAATGTATTGACACATCAAGTCGCA 211844 Query 39490 ATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTAC 39549 |||||| || | | | || || |||||||| || | | |||||||| || | || Sbjct 211845 ATTCATACCAAGTAATGAGACAGGAAGAGCCTCGGTAAAGTATTCTTTTTCAATCACAAC 211904 Query 39550 GGCCTCTGTTA-----TTATCGATGTTACTACCTC-ATCACTCGGTGGATGCAATAAATG 39603 || || || | || |||| | || || |||| ||| || || || Sbjct 211905 AGCTTCAGTGACAATTTTCTCGAC---AATAGCTGGATCA---GGTTTATTTTGCAAGTG 211958 Query 39604 TTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTT 39663 || | ||| || | || || |||||| || ||||||| || || | ||| || Sbjct 211959 AGCGAATAATAAACATCCAAAATCTGTATGTAGACCTTCATCTCGACAGATAAGTTCATT 212018 Query 39664 AGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGA 39723 |||||| || | |||||||||| ||| | |||||| | |||||||||||||||||| || Sbjct 212019 AGAAAAGGTTAAACCAGGCATTAAACCTCTCTTTTTCAACCAAAATATGGCAGCAAATGA 212078 Query 39724 TCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGT 39783 |||||| || || | ||||| | | |||||| ||||| | || || || | || Sbjct 212079 TCCAGAGAAAAATACACCTTCAATAGTTGCAAAAGCAACTAATCGTTCCCCAAATAATGC 212138 Query 39784 ATCATTAT-GT--ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGT 39840 |||| | || ||||| ||| | ||| ||||| |||| || | ||| || || | Sbjct 212139 TTCATCGTCGTTAATCCATTTCAAAGTCCAGTCAGCCTTCTGTTTGATACATGGGATGTT 212198 Query 39841 TTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTA--TT 39898 | || ||||||| ||| | | ||||||| | ||| ||| || ||||||| | Sbjct 212199 GACAATTGCATTAAGAAGAAAGTCTTTTTCAATAGGGTCTCTAATGTAAGTATCTAACTG 212258 Query 39899 AACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACAT 39958 ||||| || |||| ||||| || ||||| || ||||| || || || |||| | Sbjct 212259 TACAGA--GTAAGTTTCAGAATGTATATTTTCTGTCATGATCTGGAACCCATAGAAACTT 212316 Query 39959 CTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATT 40018 | ||||||| |||||| ||||||| |||| | || | ||||||||||| || | Sbjct 212317 TTGGCTTCAGGAATTTGAACCTCTGCTGAAAAGTTCTCAACTAAATTTTCATTAACAAGA 212376 Query 40019 CCATCACTAGCGGCAAAAAATGCCAATACATGTTTA-ATAAAATATTTTTCA-TCGGGTG 40076 |||||| || |||||||| |||||||| | || | ||||| || | ||| | || Sbjct 212377 CCATCAGATGCTGCAAAAAAAGCCAATAC-TCTTGAGATAAAGAATCTCTCATTTTCGTT 212435 Query 40077 TCAATT--TATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAA 40134 | | || | | ||||||| ||||| || | | ||| | ||| || | ||||| || Sbjct 212436 TAACTTAGTGTCCCAGTCAGGTATATCCTTAGCAAGATCAATTTCCTCTGTAGTCCAGAA 212495 Query 40135 CGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAAC 40194 || ||||| ||| |||||||| | ||| || |||| ||||| |||||||| ||||| Sbjct 212496 GGAAGCCTCGTGCTTCTTGTACATTTGCCAAATTTCACCATATTTAATTGGAAACATAAC 212555 Query 40195 AAATCT 40200 |||||| Sbjct 212556 AAATCT 212561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907632255040