Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq1 100 2e-16
seq8 91.5 1e-13
seq12 89.7 4e-13
>seq1
Length=2214157
Score = 100 bits (110), Expect = 2e-16
Identities = 408/628 (65%), Gaps = 15/628 (2%)
Strand=Plus/Plus
Query 131367 AATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTGCCCAAATTTTGTTGAT 131426
|||| | ||||||||| || ||||| || ||||| || || | ||||| |||||
Sbjct 31688 AATATTCAACAATTTCACAACATAAATTTGAACTTTTTATTGTACCAAGATTTTTTTGAT 31747
Query 131427 TGCTTTTAGCATTCACATGG-TCCTTGTACATCATGTAGGGCGTGCCCGTTTCGACTTGA 131485
| ||||| ||| ||||| || || || | ||| | || | || ||||| |||
Sbjct 31748 TACTTTTTTTATT-ACATGCATCTTTATAAAGCATAAATGGAATACCAGTTTCTGTTTGT 31806
Query 131486 GTTTCAATAAT-GTATCGAAAGAGTTTTCGAGCAGACAATTGATATTTGTA--TTGGCCG 131542
| ||| | ||| | || || |||||| |||| ||||| | || | || ||
Sbjct 31807 GCTTCCAAAATTGAATACCAA-AGTTTTTGAGCTTT-AATTGTT-TTAACAGCTTTACCT 31863
Query 131543 CGTTTTTCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCCA-AACGAACTGTCCAAATT 131601
|||||| || ||||| || || | |||||| | | ||| || | ||| |
Sbjct 31864 TCTTTTTCATATTTTTCATATAATGCTTCAAATTCATCACCATAAACATCTGAAAGACCA 31923
Query 131602 GGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAA 131661
||||| ||| | || | | || ||||| || || |||||||||| |||||||
Sbjct 31924 GGGAC-TTCATTTGGGGAAAATAATGACCATTGACCATTTTGTTCAACTCTTCTCATAAA 31982
Query 131662 CAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCAT 131721
||||| | | |||||| || || | |||||| ||| | | |||||| |||| ||
Sbjct 31983 TAAATCAGAAATCCATAATGCTGCAAATAAATCTCTTGCTCTAATTTCTTCTTTACC-AT 32041
Query 131722 AAtttttttCAAATTTAAAA-AGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTG 131780
||||||| || | || | | || |||| || |||||||| ||||||||||||| ||
Sbjct 32042 GATTTTTTCTAATATCAATATAATCAAAAACATCAGCATGCCATGGTTCCAAATACATTG 32101
Query 131781 CCATTGCGCC---TTTGCGCTTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATA 131837
| | || || | | ||||| ||||||| ||||| | | | ||||| | |
Sbjct 32102 CAAAAGCACCAGGTCTTTTATTACCACCTTGATCAACATATCTTGCAGTATTGTTAAAAA 32161
Query 131838 CGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCAT 131897
| || ||||| || | ||| || | | ||||| || | ||| || |||
Sbjct 32162 CACGTAACATTGGAATAATACCATTAGATGTACCATTTGTACCTGCAATATAAGAACCAG 32221
Query 131898 TGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGC 131957
| ||| || || |||| | || ||||| ||||| | |||| || |||| || |
Sbjct 32222 TACTTCTAATATTATGAATATGAAGACCAATTCCTCCAGCTGATTTTGAAATTAAAGCAC 32281
Query 131958 ATTTGGTTAGAGTGTTATAGATACCTTC 131985
| | ||| ||| | ||| ||||||||
Sbjct 32282 AAGTTTTTAAAGTATCATAAATACCTTC 32309
>seq8
Length=1087023
Score = 91.5 bits (100), Expect = 1e-13
Identities = 164/238 (69%), Gaps = 4/238 (2%)
Strand=Plus/Plus
Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTC 27094
||| ||||||||||| || || || |||||||| |||||||| | | | || ||||
Sbjct 676700 CAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGATAAGGTACGTCCGTC 676759
Query 27095 TTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATC 27154
||| | ||||||||||| | || | | ||||| || || || | || || || ||
Sbjct 676760 TTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGAATTCCTTCCTTGTC 676819
Query 27155 GGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGA 27214
|| || || | | || | |||||| | || |||||| || ||||| || |
Sbjct 676820 TTGAATTTTTGACTTAACATTGTCAATAGTGTCAGAGGATTCAACCTCGAGAGTAATGGT 676879
Query 27215 TTTGCCCGTCAGAGTTTTCACAAAGATTTGCA---TAGCTGCTA-AAAATTTATTAAA 27268
||| || |||| ||||| || ||||| |||| ||| ||| ||||||| |||||
Sbjct 676880 TTTACCGGTCAAGGTTTTGACGAAGATCTGCATTGTAGAGTCTATAAAATTTGTTAAA 676937
>seq12
Length=712717
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||||||||| || || || ||||| || |||||||| | | | || | |||||
Sbjct 150943 ACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAGTCAGATAAGGTACGGCCATCTTCC 151002
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
| || ||||| || |||| | ||| |||||||| || || | ||||| |||||
Sbjct 151003 AATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATTCCCTCCTTATCTTGA 151062
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
||||| ||| | | || | |||||| | | ||||| || ||||| || | ||
Sbjct 151063 ATCTTTGATTTGACATTATCAATAGTGTCAGATGACTCAACCTCAAGAGTAATTGTCTTC 151122
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || || ||||| ||||| || |||||
Sbjct 151123 CCTGTAAGGGTTTTAACAAAAATCTGCAT 151151
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424933695671232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |