Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1 100 2e-16 seq8 91.5 1e-13 seq12 89.7 4e-13 >seq1 Length=2214157 Score = 100 bits (110), Expect = 2e-16 Identities = 408/628 (65%), Gaps = 15/628 (2%) Strand=Plus/Plus Query 131367 AATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTGCCCAAATTTTGTTGAT 131426 |||| | ||||||||| || ||||| || ||||| || || | ||||| ||||| Sbjct 31688 AATATTCAACAATTTCACAACATAAATTTGAACTTTTTATTGTACCAAGATTTTTTTGAT 31747 Query 131427 TGCTTTTAGCATTCACATGG-TCCTTGTACATCATGTAGGGCGTGCCCGTTTCGACTTGA 131485 | ||||| ||| ||||| || || || | ||| | || | || ||||| ||| Sbjct 31748 TACTTTTTTTATT-ACATGCATCTTTATAAAGCATAAATGGAATACCAGTTTCTGTTTGT 31806 Query 131486 GTTTCAATAAT-GTATCGAAAGAGTTTTCGAGCAGACAATTGATATTTGTA--TTGGCCG 131542 | ||| | ||| | || || |||||| |||| ||||| | || | || || Sbjct 31807 GCTTCCAAAATTGAATACCAA-AGTTTTTGAGCTTT-AATTGTT-TTAACAGCTTTACCT 31863 Query 131543 CGTTTTTCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCCA-AACGAACTGTCCAAATT 131601 |||||| || ||||| || || | |||||| | | ||| || | ||| | Sbjct 31864 TCTTTTTCATATTTTTCATATAATGCTTCAAATTCATCACCATAAACATCTGAAAGACCA 31923 Query 131602 GGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAA 131661 ||||| ||| | || | | || ||||| || || |||||||||| ||||||| Sbjct 31924 GGGAC-TTCATTTGGGGAAAATAATGACCATTGACCATTTTGTTCAACTCTTCTCATAAA 31982 Query 131662 CAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCAT 131721 ||||| | | |||||| || || | |||||| ||| | | |||||| |||| || Sbjct 31983 TAAATCAGAAATCCATAATGCTGCAAATAAATCTCTTGCTCTAATTTCTTCTTTACC-AT 32041 Query 131722 AAtttttttCAAATTTAAAA-AGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTG 131780 ||||||| || | || | | || |||| || |||||||| ||||||||||||| || Sbjct 32042 GATTTTTTCTAATATCAATATAATCAAAAACATCAGCATGCCATGGTTCCAAATACATTG 32101 Query 131781 CCATTGCGCC---TTTGCGCTTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATA 131837 | | || || | | ||||| ||||||| ||||| | | | ||||| | | Sbjct 32102 CAAAAGCACCAGGTCTTTTATTACCACCTTGATCAACATATCTTGCAGTATTGTTAAAAA 32161 Query 131838 CGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCAT 131897 | || ||||| || | ||| || | | ||||| || | ||| || ||| Sbjct 32162 CACGTAACATTGGAATAATACCATTAGATGTACCATTTGTACCTGCAATATAAGAACCAG 32221 Query 131898 TGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGC 131957 | ||| || || |||| | || ||||| ||||| | |||| || |||| || | Sbjct 32222 TACTTCTAATATTATGAATATGAAGACCAATTCCTCCAGCTGATTTTGAAATTAAAGCAC 32281 Query 131958 ATTTGGTTAGAGTGTTATAGATACCTTC 131985 | | ||| ||| | ||| |||||||| Sbjct 32282 AAGTTTTTAAAGTATCATAAATACCTTC 32309 >seq8 Length=1087023 Score = 91.5 bits (100), Expect = 1e-13 Identities = 164/238 (69%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTC 27094 ||| ||||||||||| || || || |||||||| |||||||| | | | || |||| Sbjct 676700 CAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGATAAGGTACGTCCGTC 676759 Query 27095 TTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATC 27154 ||| | ||||||||||| | || | | ||||| || || || | || || || || Sbjct 676760 TTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGAATTCCTTCCTTGTC 676819 Query 27155 GGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGA 27214 || || || | | || | |||||| | || |||||| || ||||| || | Sbjct 676820 TTGAATTTTTGACTTAACATTGTCAATAGTGTCAGAGGATTCAACCTCGAGAGTAATGGT 676879 Query 27215 TTTGCCCGTCAGAGTTTTCACAAAGATTTGCA---TAGCTGCTA-AAAATTTATTAAA 27268 ||| || |||| ||||| || ||||| |||| ||| ||| ||||||| ||||| Sbjct 676880 TTTACCGGTCAAGGTTTTGACGAAGATCTGCATTGTAGAGTCTATAAAATTTGTTAAA 676937 >seq12 Length=712717 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||||||||| || || || ||||| || |||||||| | | | || | ||||| Sbjct 150943 ACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAGTCAGATAAGGTACGGCCATCTTCC 151002 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | || ||||| || |||| | ||| |||||||| || || | ||||| ||||| Sbjct 151003 AATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATTCCCTCCTTATCTTGA 151062 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| ||| | | || | |||||| | | ||||| || ||||| || | || Sbjct 151063 ATCTTTGATTTGACATTATCAATAGTGTCAGATGACTCAACCTCAAGAGTAATTGTCTTC 151122 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || ||||| ||||| || ||||| Sbjct 151123 CCTGTAAGGGTTTTAACAAAAATCTGCAT 151151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933695671232