Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq1 264 1e-65
>seq1
Length=2214157
Score = 264 bits (292), Expect = 1e-65
Identities = 976/1505 (65%), Gaps = 37/1505 (2%)
Strand=Plus/Plus
Query 110669 TTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGT 110728
|| ||||| ||| |||||||| | |||||| || || |||| || ||||||
Sbjct 31072 TTAACAATTTGAAATTCACCTGCTAAAACTCTTCTACTATAAATATTTGAAGTATATGGT 31131
Query 110729 TCAAAGCATTCATTATTACCCAAGA-TTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 110787
||||| ||||||||| | |||||| |||||| || || ||||||||||||||||| |
Sbjct 31132 TCAAAACATTCATTAA-ATCCAAGAATTTGTGATGTTGATGCTGTTGGCATTGGTGCAAC 31190
Query 110788 CAAAAGACTGTTACGAAGACCCTTCTCCTTGA--TGCGTTCCTTGAGAACATCCCAGTCG 110845
| ||| || | | ||| | | |||| | || || | | |||||| ||
Sbjct 31191 AAGAAGTGAATTTCTTAAACCATATT--TTGACATTTTTTGTTTCAATAAATCCCAATCC 31248
Query 110846 TA--GTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGG 110903
| ||| || |||||| || |||| | | ||| | || | | ||||| || | |
Sbjct 31249 CAAAGTTCAG-TTGGTTGAACATTCC-ATAAATCATATTGTAAAATACCTTGAGATGTTG 31306
Query 110904 GAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCA 110963
| || || ||| | |||||||| | ||| ||| || |||||||| || || |
Sbjct 31307 GTGATCCTTCATAAGTTTCATATGGTCCTAATTCTTTTGCTAATTCACATGATGCTTCAA 31366
Query 110964 GGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAAT 111023
| || ||||| || |||||||| || || || | || |||||| |||||
Sbjct 31367 CAGCAGCATGATAAATAGTTTCAAATATTTGAATGTTTAATAATTTAGCTTCAGGTGAAT 31426
Query 111024 CAAATGCGTAGCGGCACA-AAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATA 111082
|||||| ||| | | | | ||||| |||| || | |||||||||||| ||| ||||
Sbjct 31427 CAAATG-GTAAACGAAGACACATAAAAGCATCAGCTAAACCTTGAACACCTAAAGCAATT 31485
Query 111083 GGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATG 111142
||||| |||| |||||| || |||| || ||| |||||| |||| || |||||
Sbjct 31486 GGTCTATGTCTCATATTTGAATTTCTTGCTTCAATAACTGGATAATAATTCCTATCAATA 31545
Query 111143 ACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCA-AA 111201
| | |||| ||| ||||| ||||| || ||||||||||||| | ||| | ||
Sbjct 31546 ATTTTATTTAAATTACGAACAACAACTTTTGTAATATCATGAAGTTTTTGAAAATTATAA 31605
Query 111202 AGTGCGA--GTCTCTTC---ATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAA 111256
| || | | ||||| || | | | |||| | || | |||||| |||||||||
Sbjct 31606 ATTGAAACGTTATCTTCAATATCAATAAATGTTGGTAATGCTAATGATGCTAAATTGCAA 31665
Query 111257 ACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTA 111316
||||| ||||| | | || || | |||||| |||||| || ||||| ||
Sbjct 31666 ACAGCAACTTCATCGGGTGCAGAATATTCAACAATTTCACAACATAAATTTGAACTTTTT 31725
Query 111317 ATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAG 111376
|| || || | ||| ||||| ||||| || || || || ||||| || || ||||| |
Sbjct 31726 ATTGTACCAAGATTTTTTTGATTACTTTTTTTATTACATGCATCTTTATAAAGCATAAAT 31785
Query 111377 GGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGCGGCTGGTACA 111436
|| | || || || || |||| || | ||| | | ||||| | || | |
Sbjct 31786 GGAATACCAGTTTCTGTTTGTGCTTCCAAAATTGAATACCAAAGTTTTTGAGC---TTTA 31842
Query 111437 ATGGCGTT---GGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCA 111493
|| | || || || || || || ||| || | |||||||| || |||
Sbjct 31843 ATTGTTTTAACAGCTTTACCTTCTTTTTCATATTTTTCATATAATGCTTCAAATTCATCA 31902
Query 111494 CCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCT 111553
|| | || || ||||| || | | | ||| | || | |||||||||||| |
Sbjct 31903 CCATAAACATCTGAAAGACCAGGGACTTCATTTGGGGAAAATAATGACCATTGACCATTT 31962
Query 111554 TCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACAC 111613
| ||||| | |||| || | || | |||||| | | || ||| | ||||||
Sbjct 31963 TGTTCAACTCTTCTCATAAATAAATCAGAAATCCATAATGCTGCAAATAAATCTCTTGCT 32022
Query 111614 CGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGC 111673
| | ||||| | ||| || || || | |||| | || | | ||| || |||
Sbjct 32023 CTAATTTCTTCTTTACCATGATTTTTTCTAATATCAATATAATCAAAAACATCAGCATGC 32082
Query 111674 CATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACATA 111729
||||| || | ||| | ||| | || || |||| | ||| |||||| |||||
Sbjct 32083 CATGGTTCCAAATACATTGCAAAAGCACCAGGTCTTT-TATTACCACCTTGATCAACATA 32141
Query 111730 GCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT 111789
| || || |||||| || || | ||||||||||||||||| ||| |||||||||
Sbjct 32142 TCTTGCAGTATTGTTAAAAACACGTAACATTGGAATAATACCATTAGATGTACCATTTGT 32201
Query 111790 CCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGC 111849
|| |||| ||| | | ||| | || ||| || || | ||||| || |||||
Sbjct 32202 ACCTGCAATATAAGAACCAGTACTTCTAATATTATGAATATGAAGACCAATTCCTCCAGC 32261
Query 111850 CCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTC 111909
| ||||| ||| ||||| | | ||| |||| ||||| | ||||| || ||
Sbjct 32262 TGATTTTGAAATTAAAGCACAAGTTTTTAAAGTATCATAAATACCTTCAATTGAATCTTC 32321
Query 111910 CTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAG 111969
|| | || ||||| || ||| ||||| || ||| || ||||||||||| || |
Sbjct 32322 TTTCATAGCAATAAGAAAACAAGAAGACATTTGTGGTTGAGGAGTACCAGCATTAAATAA 32381
Query 111970 GGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGTCTCCAAGACAG 112028
|| || | || ||| |||| ||| || ||||| | || || || | |||
Sbjct 32382 AGTGGGAGAAGCATGAGTGAA-ATATTTTAATGACATTAAATTATAGGTTTCAATGACTT 32440
Query 112029 AATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGA--ACATGTACTGTGGGGT 112086
||||| || || || || || || | || || | ||| | | |||| ||||| |
Sbjct 32441 TTTCAATATCATCACCATGAATACCAACAGCAACTCTCATAATTAAATGT--TGTGGTCT 32498
Query 112087 TTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GCTCTTCTCAAGGGTTTTGAGACCAA 112145
||| | | ||||| || | | ||| || | |||| ||||| ||||| | |||||
Sbjct 32499 TTCAGCAACTTTACCATCAAGTCTTAAAAGGTATGATCTT-TCAAGAGTTTTAAAACCAA 32557
Query 112146 AGTAA 112150
|| ||
Sbjct 32558 AGAAA 32562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628030932345600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |