Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1 264 1e-65 >seq1 Length=2214157 Score = 264 bits (292), Expect = 1e-65 Identities = 976/1505 (65%), Gaps = 37/1505 (2%) Strand=Plus/Plus Query 110669 TTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGT 110728 || ||||| ||| |||||||| | |||||| || || |||| || |||||| Sbjct 31072 TTAACAATTTGAAATTCACCTGCTAAAACTCTTCTACTATAAATATTTGAAGTATATGGT 31131 Query 110729 TCAAAGCATTCATTATTACCCAAGA-TTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 110787 ||||| ||||||||| | |||||| |||||| || || ||||||||||||||||| | Sbjct 31132 TCAAAACATTCATTAA-ATCCAAGAATTTGTGATGTTGATGCTGTTGGCATTGGTGCAAC 31190 Query 110788 CAAAAGACTGTTACGAAGACCCTTCTCCTTGA--TGCGTTCCTTGAGAACATCCCAGTCG 110845 | ||| || | | ||| | | |||| | || || | | |||||| || Sbjct 31191 AAGAAGTGAATTTCTTAAACCATATT--TTGACATTTTTTGTTTCAATAAATCCCAATCC 31248 Query 110846 TA--GTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGG 110903 | ||| || |||||| || |||| | | ||| | || | | ||||| || | | Sbjct 31249 CAAAGTTCAG-TTGGTTGAACATTCC-ATAAATCATATTGTAAAATACCTTGAGATGTTG 31306 Query 110904 GAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCA 110963 | || || ||| | |||||||| | ||| ||| || |||||||| || || | Sbjct 31307 GTGATCCTTCATAAGTTTCATATGGTCCTAATTCTTTTGCTAATTCACATGATGCTTCAA 31366 Query 110964 GGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAAT 111023 | || ||||| || |||||||| || || || | || |||||| ||||| Sbjct 31367 CAGCAGCATGATAAATAGTTTCAAATATTTGAATGTTTAATAATTTAGCTTCAGGTGAAT 31426 Query 111024 CAAATGCGTAGCGGCACA-AAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATA 111082 |||||| ||| | | | | ||||| |||| || | |||||||||||| ||| |||| Sbjct 31427 CAAATG-GTAAACGAAGACACATAAAAGCATCAGCTAAACCTTGAACACCTAAAGCAATT 31485 Query 111083 GGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATG 111142 ||||| |||| |||||| || |||| || ||| |||||| |||| || ||||| Sbjct 31486 GGTCTATGTCTCATATTTGAATTTCTTGCTTCAATAACTGGATAATAATTCCTATCAATA 31545 Query 111143 ACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCA-AA 111201 | | |||| ||| ||||| ||||| || ||||||||||||| | ||| | || Sbjct 31546 ATTTTATTTAAATTACGAACAACAACTTTTGTAATATCATGAAGTTTTTGAAAATTATAA 31605 Query 111202 AGTGCGA--GTCTCTTC---ATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAA 111256 | || | | ||||| || | | | |||| | || | |||||| ||||||||| Sbjct 31606 ATTGAAACGTTATCTTCAATATCAATAAATGTTGGTAATGCTAATGATGCTAAATTGCAA 31665 Query 111257 ACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTA 111316 ||||| ||||| | | || || | |||||| |||||| || ||||| || Sbjct 31666 ACAGCAACTTCATCGGGTGCAGAATATTCAACAATTTCACAACATAAATTTGAACTTTTT 31725 Query 111317 ATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAG 111376 || || || | ||| ||||| ||||| || || || || ||||| || || ||||| | Sbjct 31726 ATTGTACCAAGATTTTTTTGATTACTTTTTTTATTACATGCATCTTTATAAAGCATAAAT 31785 Query 111377 GGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGCGGCTGGTACA 111436 || | || || || || |||| || | ||| | | ||||| | || | | Sbjct 31786 GGAATACCAGTTTCTGTTTGTGCTTCCAAAATTGAATACCAAAGTTTTTGAGC---TTTA 31842 Query 111437 ATGGCGTT---GGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCA 111493 || | || || || || || || ||| || | |||||||| || ||| Sbjct 31843 ATTGTTTTAACAGCTTTACCTTCTTTTTCATATTTTTCATATAATGCTTCAAATTCATCA 31902 Query 111494 CCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCT 111553 || | || || ||||| || | | | ||| | || | |||||||||||| | Sbjct 31903 CCATAAACATCTGAAAGACCAGGGACTTCATTTGGGGAAAATAATGACCATTGACCATTT 31962 Query 111554 TCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACAC 111613 | ||||| | |||| || | || | |||||| | | || ||| | |||||| Sbjct 31963 TGTTCAACTCTTCTCATAAATAAATCAGAAATCCATAATGCTGCAAATAAATCTCTTGCT 32022 Query 111614 CGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGC 111673 | | ||||| | ||| || || || | |||| | || | | ||| || ||| Sbjct 32023 CTAATTTCTTCTTTACCATGATTTTTTCTAATATCAATATAATCAAAAACATCAGCATGC 32082 Query 111674 CATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACATA 111729 ||||| || | ||| | ||| | || || |||| | ||| |||||| ||||| Sbjct 32083 CATGGTTCCAAATACATTGCAAAAGCACCAGGTCTTT-TATTACCACCTTGATCAACATA 32141 Query 111730 GCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT 111789 | || || |||||| || || | ||||||||||||||||| ||| ||||||||| Sbjct 32142 TCTTGCAGTATTGTTAAAAACACGTAACATTGGAATAATACCATTAGATGTACCATTTGT 32201 Query 111790 CCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGC 111849 || |||| ||| | | ||| | || ||| || || | ||||| || ||||| Sbjct 32202 ACCTGCAATATAAGAACCAGTACTTCTAATATTATGAATATGAAGACCAATTCCTCCAGC 32261 Query 111850 CCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTC 111909 | ||||| ||| ||||| | | ||| |||| ||||| | ||||| || || Sbjct 32262 TGATTTTGAAATTAAAGCACAAGTTTTTAAAGTATCATAAATACCTTCAATTGAATCTTC 32321 Query 111910 CTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAG 111969 || | || ||||| || ||| ||||| || ||| || ||||||||||| || | Sbjct 32322 TTTCATAGCAATAAGAAAACAAGAAGACATTTGTGGTTGAGGAGTACCAGCATTAAATAA 32381 Query 111970 GGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGTCTCCAAGACAG 112028 || || | || ||| |||| ||| || ||||| | || || || | ||| Sbjct 32382 AGTGGGAGAAGCATGAGTGAA-ATATTTTAATGACATTAAATTATAGGTTTCAATGACTT 32440 Query 112029 AATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGA--ACATGTACTGTGGGGT 112086 ||||| || || || || || || | || || | ||| | | |||| ||||| | Sbjct 32441 TTTCAATATCATCACCATGAATACCAACAGCAACTCTCATAATTAAATGT--TGTGGTCT 32498 Query 112087 TTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GCTCTTCTCAAGGGTTTTGAGACCAA 112145 ||| | | ||||| || | | ||| || | |||| ||||| ||||| | ||||| Sbjct 32499 TTCAGCAACTTTACCATCAAGTCTTAAAAGGTATGATCTT-TCAAGAGTTTTAAAACCAA 32557 Query 112146 AGTAA 112150 || || Sbjct 32558 AGAAA 32562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030932345600