Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1 122 1e-22 seq14 87.8 2e-12 >seq1 Length=2214157 Score = 122 bits (134), Expect = 1e-22 Identities = 735/1169 (63%), Gaps = 17/1169 (1%) Strand=Plus/Plus Query 118181 ATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGA-TTTGGGCTGTGG 118239 ||| ||||| | || ||||| ||||| || ||||| | |||||| |||| | ||| | Sbjct 31110 ATAAATATTTGAAGTATATGGTTCAAAACATTCATTAA-ATCCAAGAATTTGTGATGTTG 31168 Query 118240 AGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTT 118299 | ||||| ||||| ||||| | ||||| || | | ||| | || || || Sbjct 31169 ATGCTGTTGGCATTGGTGCAACAAGAAGTGAATTTCTTAAACCATATTTTGACATTTTTT 31228 Query 118300 CCTTGAGAGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTG 118357 || | ||||| || | ||| || ||| | | | ||| | |||| | || Sbjct 31229 GTTTCAATAAATCCCAATCCCAAAGTTCAG--TTGGTTGAACATTCCATAAATCATATTG 31286 Query 118358 GAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGC 118417 | |||||||| || | ||| ||||| ||| | || |||||||| || | | || Sbjct 31287 TAAAATACCTTGAGATGTTGGTGATCCTTCATAAGTTTCATATGGTCCTAATTCTTTTGC 31346 Query 118418 CAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT 118477 ||||| | || || | || || ||||| || |||||||| || || || | Sbjct 31347 TAATTCACATGATGCTTCAACAGCAGCATGATAAATAGTTTCAAATATTTGAATGTTTAA 31406 Query 118478 TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACC 118537 | || || || |||||||| | | || | ||||| |||| || | ||| Sbjct 31407 TAATTTAGCTTCAGGTGAATCAAATGGTAAACGAAGACACATAAAAGCATCAGCTAAACC 31466 Query 118538 TTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGG 118597 ||| ||||| | ||||||| | |||||||||||| || || | || || || Sbjct 31467 TTGAACACCTAAAGCAATTGGTCTATGTCTCATATTTGAATTTCTTGCTTCAATAACTGG 31526 Query 118598 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 118657 |||| |||||||||| |||| |||||| ||| ||||| ||||| || ||||| Sbjct 31527 ATAATAATTCCTATCAATAATTTTATTTAAATTACGAACAACAACTTTTGTAATATCATG 31586 Query 118658 AAGCTTTTCGTAATCA-AAACTGCGA--GTCTCTTC---ATTGACATACTTAGGAAGGGC 118711 ||| |||| ||| | ||| || | | ||||| || | | | | || | || Sbjct 31587 AAGTTTTTGAAAATTATAAATTGAAACGTTATCTTCAATATCAATAAATGTTGGTAATGC 31646 Query 118712 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 118771 | ||| || | ||| || |||| ||||| ||| || || | |||||| Sbjct 31647 TAATGATGCTAAATTGCAAACAGCAACTTCATCGGGTGCAGAATATTCAACAATTTCACA 31706 Query 118772 GCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 118831 || || |||||||| || || || || | || |||||||| ||| | ||||| || Sbjct 31707 ACATAAATTTGAACTTTTTATTGTACCAAGATTTTTTTGATTACTTTTTTTATTACATGC 31766 Query 118832 ATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 118891 ||| || |||||||| |||| | || || || ||||| | | | ||| | | ||| Sbjct 31767 ATCTTTATAAAGCATAAATGGAATACCAGTTTCTGTTTGTGCTTCCAAAATTGAATACCA 31826 Query 118892 GACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAG 118951 | | |||| | || ||| || |||| || || ||| || | Sbjct 31827 AAGTTTTTGAGCTTTAATTGTTTTAACAGCTTTACCTTCTTTTTCATATTTTTCATATAA 31886 Query 118952 GGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAG 119011 |||||||| || ||||| | ||||| || || || | | || |||| | || | Sbjct 31887 TGCTTCAAATTCATCACCATAAACATCTGAAAGACCAGGGACTTCATTTGGGGAAAATAA 31946 Query 119012 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGA 119071 |||||||||||| | ||||| | |||| || | || | ||||| | || | Sbjct 31947 TGACCATTGACCATTTTGTTCAACTCTTCTCATAAATAAATCAGAAATCCATAATGCTGC 32006 Query 119072 GAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTC 119131 || | ||| | | | |||||| | || ||||| | | || | | | || Sbjct 32007 AAATAAATCTCTTGCTCTAATTTCTTCTTTACCATGATTTTTTCTAATATCAATATAATC 32066 Query 119132 CATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTACGACGAC 119187 | | ||| || ||||| ||||||| |||| || | | ||| ||| | || Sbjct 32067 AAAAACATCAGCATGCCATGGTTCCAAATACATTGCAAAAGCACCAGGTCTT-TTATTAC 32125 Query 119188 CAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCAT 119247 || | || | ||||| || ||||| |||||| ||||| | ||||||||| ||||||| Sbjct 32126 CACCTTGATCAACATATCTTGCAGTATTGTTAAAAACACGTAACATTGGAATAATACCAT 32185 Query 119248 CGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCA 119307 ||| |||||||| || |||| ||| | | ||| | || || || || | Sbjct 32186 TAGATGTACCATTTGTACCTGCAATATAAGAACCAGTACTTCTAATATTATGAATATGAA 32245 Query 119308 TACCAATACCCCCTGCCCACTTTGAGATT 119336 |||||| || || || | ||||| ||| Sbjct 32246 GACCAATTCCTCCAGCTGATTTTGAAATT 32274 >seq14 Length=670130 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| ||||| || ||||| |||| | |||||| || || || ||| Sbjct 578302 GCAAAATCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTAGAAAAAGTAAGGCCT 578243 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||| | ||| | ||| || ||||||||||| | || || |||||||| || || Sbjct 578242 GGCATTAAACCTCTCTTTTTTAACCAGAAAATAGATGCGAAAGAACCAGAGAAAAAAATA 578183 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAA 130173 || || ||| ||||| |||| ||||| |||||||| Sbjct 578182 CCTTCAACAGCAGCGAAAGCAACAAGACGTTCAGCAAA 578145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434148660160