Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq1 217 2e-51
seq14 98.7 1e-15
>seq1
Length=2214157
Score = 217 bits (240), Expect = 2e-51
Identities = 945/1472 (64%), Gaps = 37/1472 (3%)
Strand=Plus/Minus
Query 104159 TTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGTGTC-TTGATGG 104216
|||||| | ||||| ||||| |||| | || ||| | | || |||||| ||| ||
Sbjct 32558 TTTGGTTTTAAAACTCTTGA-AAGATCATACCTTTTAAGACTTGATGGTAAAGTTGCTG- 32501
Query 104217 AAACCCCACAGTACATGT--TCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGA 104274
||| ||||| |||| | | ||| | || || | ||||||||||| || || |||||
Sbjct 32500 AAAGACCACA--ACATTTAATTATGAGAGTTGCTGTTGGTATTCATGGTGATGATATTGA 32443
Query 104275 TTCTGTCTTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAA 104333
||| | || || || | ||||| || ||| |||| ||| || | || |
Sbjct 32442 AAAAGTCATTGAAACCTATAATTTAATGTCATTAAAATAT-TTCACTCATGCTTCTCCCA 32384
Query 104334 CCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACA 104393
| | || ||||||||||| || ||| |||||||| ||| || ||||| || | |
Sbjct 32383 CTTTATTTAATGCTGGTACTCCTCAACCACAAATGTCTTCTTGTTTTCTTATTGCTATGA 32324
Query 104394 AGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGT 104453
| || || ||||| | ||||| |||| ||| | | ||||| ||| ||||| |
Sbjct 32323 AAGAAGATTCAATTGAAGGTATTTATGATACTTTAAAAACTTGTGCTTTAATTTCAAAAT 32264
Query 104454 GGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGG 104513
||||| || ||||| | || || ||| || | ||| | | ||| |||| |
Sbjct 32263 CAGCTGGAGGAATTGGTCTTCATATTCATAATATTAGAAGTACTGGTTCTTATATTGCAG 32204
Query 104514 GGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 104573
| ||||||||| ||| ||||||||||||||||| | || || |||||| || ||
Sbjct 32203 GTACAAATGGTACATCTAATGGTATTATTCCAATGTTACGTGTTTTTAACAATACTGCAA 32144
Query 104574 GCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCA 104629
| ||||| |||||| ||| | |||| || || | ||| | ||| | || |||
Sbjct 32143 GATATGTTGATCAAGGTGGTAAT-AAAAGACCTGGTGCTTTTGCAATGTATTTGGAACCA 32085
Query 104630 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCG 104689
||||| || ||| | | || | |||| | | || || ||| | || ||
Sbjct 32084 TGGCATGCTGATGTTTTTGATTATATTGATATTAGAAAAAATCATGGTAAAGAAGAAATT 32025
Query 104690 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 104749
| | ||| | || | || | |||||| | ||| | || |||| ||||||||
Sbjct 32024 AGAGCAAGAGATTTATTTGCAGCATTATGGATTTCTGATTTATTTATGAGAAGAGTTGAA 31965
Query 104750 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG 104809
| | ||| | ||||| | |||| ||| | | | |||||||| || ||||
Sbjct 31964 CAAAATGGTCAATGGTCATTATTTTCCCCAAATGAAGTCCCTGGTCTTTCAGATGTTTAT 31905
Query 104810 GGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACG 104869
||||| || |||||||| | || ||| || || |||||||| || | ||
Sbjct 31904 GGTGATGAATTTGAAGCATTATATGAAAAATATGAAAAAGAAGGTAAAGCTGTTAAAACA 31845
Query 104870 GTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929
| |||| | | ||| | | ||| | | | ||||| || ||||||| |||
Sbjct 31844 ATTAAAGCTCAAAAACTTTGGTATTCAATTTTGGAAGCACAAACAGAAACTGGTATTCCA 31785
Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989
| |||||||| ||||| || ||||| |||| ||||||||||| ||| | ||| ||
Sbjct 31784 TTTATGCTTTATAAAGATGCATGTAATAAAAAAAGTAATCAAAAAAATCTTGGTACAATA 31725
Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049
|| ||||| ||| | ||| ||||| | |||| | | | ||||| |||||
Sbjct 31724 AAAAGTTCAAATTTATGTTGTGAAATTGTTGAATATTCTGCACCCGATGAAGTTGCTGTT 31665
Query 105050 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAG-AGACAAAG-----ACA 105103
|| || | |||||| | || | || | | | | ||| | ||| || | |
Sbjct 31664 TGCAATTTAGCATCATTAGCATTACCAACATTTATTGATATTGAAGATAACGTTTCAATT 31605
Query 105104 TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTT 105163
| | ||| | ||||||| || || |||| ||| ||| || |||| | | ||
Sbjct 31604 TATAATTTTCAAAAACTTCATGATATTACAAAAGTTGTTGTTCGTAATTTAAATAAAATT 31545
Query 105164 ATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 105223
|||||||| |||| ||| || ||| || | || || ||||||||||| | |||
Sbjct 31544 ATTGATAGGAATTATTATCCAGTTATTGAAGCAAGAAATTCAAATATGAGACATAGACCA 31485
Query 105224 ATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTT 105280
|||| | | |||||||| ||| | || |||| || || |||| || | |||||
Sbjct 31484 ATTGCTTTAGGTGTTCAAGGTTTAGCTGATGCTTTTATGTGTCTTCGTTTAC---CATTT 31428
Query 105281 GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCT 105340
||||| ||||| || | | || | |||||||| || || ||||| || |||
Sbjct 31427 GATTCACCTGAAGCTAAATTATTAAACATTCAAATATTTGAAACTATTTATCATGCTGCT 31368
Query 105341 CTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 105400
|||| || | || || ||| | | || ||||||||||| | ||| || ||
Sbjct 31367 GTTGAAGCATCATGTGAATTAGCAAAAGAATTAGGACCATATGAAACTTATGAAGGATCA 31308
Query 105401 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCAC--T 105458
||| | || ||||| | | |||| |||| | | |||| || ||||| || || |
Sbjct 31307 CCAACATCTCAAGGTATTTTACAATATGATTTAT-GGAATGTTCAACCAA-CTGAACTTT 31250
Query 105459 ACGACTGGGAAGCTCTCAAGGAACGCA--TCAAGGAGAAGGGTCTTCGTAACAGTCTCCT 105516
|| ||||| | || || | |||| | | ||| | | || || ||
Sbjct 31249 GGGATTGGGATTTATTGAAACAAAAAATGTCAA--AATATGGTTTAAGAAATTCACTTCT 31192
Query 105517 CATGGCTCCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAATGCTTTG 105575
| || |||||||||||||| || || |||||| |||||| | ||||||||| ||||
Sbjct 31191 TGTTGCACCAATGCCAACAGCATCAACATCACAAATTCTTGGAT-TTAATGAATGTTTTG 31133
Query 105576 AACCCTACACGACGAACATCTATCTGAGAAGA 105607
|||| || || | || || ||| ||||||
Sbjct 31132 AACCATATACTTCAAATATTTATAGTAGAAGA 31101
>seq14
Length=670130
Score = 98.7 bits (108), Expect = 1e-15
Identities = 376/580 (65%), Gaps = 13/580 (2%)
Strand=Plus/Plus
Query 94384 TTCCCCCTGAAGTATCCAC-ACCTCTGGGAACTCTATAAGAAGGCTCAAATGAGTAATTG 94442
||||| | |||| ||||| | ||||| || | ||||| |||||| || | ||
Sbjct 577728 TTCCCAATTAAGT-TCCACGAGATCTGGCAAATGTATAAAAAGGCTGAAGCATCTTTCTG 577786
Query 94443 GACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACT---CTAAATGA 94499
|||||||||||| | ||| | || ||| | | |||||| | | | || ||| |
Sbjct 577787 GACTGCTGAAGAAATTGATTTAAGTAAAGATATTGGTGATTGGGAAAATAAGCTTAATAA 577846
Query 94500 AAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATTGT 94559
| |||| || || | | || | || || || |||| || ||||| |||||
Sbjct 577847 AGATGAGCGTTTTTTTATTTCACGCGTCTTAGCCTTTTTCGCTGCTTCAGATGGTATTGT 577906
Query 94560 TTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCAATCCTCTGAAGCGAGATCCTT 94619
| || ||| | | | |||||| | | |||||| ||| | | ||||| | | |||
Sbjct 577907 TAACGAAAATTTAGTTGAAAACTTTTCGGCTGAGGTTCAAACACCAGAAGCTAAGTGCTT 577966
Query 94620 CTATGCGTATCAGTGTCATAATG-AAATGGTGCATGGGGAGACATA--CAGTAAACTCAT 94676
|||| || || |||| ||| ||| | || |||||||| || || | ||
Sbjct 577967 TTATG-GTTTCCAAATCATGATGGAAAATATACACTCTGAGACATATTCACTAT--TAAT 578023
Query 94677 AGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGT 94736
|||| |||||||| ||| | ||| | | || | || || ||| ||
Sbjct 578024 TGACACATATATTAAAGATTCTAAAGAGCGTGAATTTTTATTCAATGCTATTGAAAATGT 578083
Query 94737 TCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCGTT 94795
||| |||||| | ||||| || ||||||||| | | ||| || | | || | || ||
Sbjct 578084 TCCTTGTATTAAGAAGAAGGCAGATTGGGCTTTAAGATGGATTAGTGATAAGGAAGCATT 578143
Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855
|||||||| || || | || || || |||||| ||||| || ||||||||||| |
Sbjct 578144 A-TTTGCTGAACGTCTTGTTGCTTTCGCTGCTGTTGAAGGTATTTTTTTCTCTGGTTCTT 578202
Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915
|| |||||| ||| | || ||| ||||| | |||||||| || || || || |
Sbjct 578203 TCGCATCTATTTTCTGGTTAAAAAAGAGAGGTTTAATGCCAGGCCTTACTTTTTCTAATG 578262
Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
| | |||| |||||| || || || ||| || |||||
Sbjct 578263 AATTGATCTGTCGTGATGAAGGTCTTCACACTGATTTTGC 578302
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583259808456640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |