Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1 217 2e-51 seq14 98.7 1e-15 >seq1 Length=2214157 Score = 217 bits (240), Expect = 2e-51 Identities = 945/1472 (64%), Gaps = 37/1472 (3%) Strand=Plus/Minus Query 104159 TTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGTGTC-TTGATGG 104216 |||||| | ||||| ||||| |||| | || ||| | | || |||||| ||| || Sbjct 32558 TTTGGTTTTAAAACTCTTGA-AAGATCATACCTTTTAAGACTTGATGGTAAAGTTGCTG- 32501 Query 104217 AAACCCCACAGTACATGT--TCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGA 104274 ||| ||||| |||| | | ||| | || || | ||||||||||| || || ||||| Sbjct 32500 AAAGACCACA--ACATTTAATTATGAGAGTTGCTGTTGGTATTCATGGTGATGATATTGA 32443 Query 104275 TTCTGTCTTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAA 104333 ||| | || || || | ||||| || ||| |||| ||| || | || | Sbjct 32442 AAAAGTCATTGAAACCTATAATTTAATGTCATTAAAATAT-TTCACTCATGCTTCTCCCA 32384 Query 104334 CCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACA 104393 | | || ||||||||||| || ||| |||||||| ||| || ||||| || | | Sbjct 32383 CTTTATTTAATGCTGGTACTCCTCAACCACAAATGTCTTCTTGTTTTCTTATTGCTATGA 32324 Query 104394 AGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGT 104453 | || || ||||| | ||||| |||| ||| | | ||||| ||| ||||| | Sbjct 32323 AAGAAGATTCAATTGAAGGTATTTATGATACTTTAAAAACTTGTGCTTTAATTTCAAAAT 32264 Query 104454 GGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGG 104513 ||||| || ||||| | || || ||| || | ||| | | ||| |||| | Sbjct 32263 CAGCTGGAGGAATTGGTCTTCATATTCATAATATTAGAAGTACTGGTTCTTATATTGCAG 32204 Query 104514 GGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 104573 | ||||||||| ||| ||||||||||||||||| | || || |||||| || || Sbjct 32203 GTACAAATGGTACATCTAATGGTATTATTCCAATGTTACGTGTTTTTAACAATACTGCAA 32144 Query 104574 GCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCA 104629 | ||||| |||||| ||| | |||| || || | ||| | ||| | || ||| Sbjct 32143 GATATGTTGATCAAGGTGGTAAT-AAAAGACCTGGTGCTTTTGCAATGTATTTGGAACCA 32085 Query 104630 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCG 104689 ||||| || ||| | | || | |||| | | || || ||| | || || Sbjct 32084 TGGCATGCTGATGTTTTTGATTATATTGATATTAGAAAAAATCATGGTAAAGAAGAAATT 32025 Query 104690 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 104749 | | ||| | || | || | |||||| | ||| | || |||| |||||||| Sbjct 32024 AGAGCAAGAGATTTATTTGCAGCATTATGGATTTCTGATTTATTTATGAGAAGAGTTGAA 31965 Query 104750 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG 104809 | | ||| | ||||| | |||| ||| | | | |||||||| || |||| Sbjct 31964 CAAAATGGTCAATGGTCATTATTTTCCCCAAATGAAGTCCCTGGTCTTTCAGATGTTTAT 31905 Query 104810 GGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACG 104869 ||||| || |||||||| | || ||| || || |||||||| || | || Sbjct 31904 GGTGATGAATTTGAAGCATTATATGAAAAATATGAAAAAGAAGGTAAAGCTGTTAAAACA 31845 Query 104870 GTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929 | |||| | | ||| | | ||| | | | ||||| || ||||||| ||| Sbjct 31844 ATTAAAGCTCAAAAACTTTGGTATTCAATTTTGGAAGCACAAACAGAAACTGGTATTCCA 31785 Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989 | |||||||| ||||| || ||||| |||| ||||||||||| ||| | ||| || Sbjct 31784 TTTATGCTTTATAAAGATGCATGTAATAAAAAAAGTAATCAAAAAAATCTTGGTACAATA 31725 Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049 || ||||| ||| | ||| ||||| | |||| | | | ||||| ||||| Sbjct 31724 AAAAGTTCAAATTTATGTTGTGAAATTGTTGAATATTCTGCACCCGATGAAGTTGCTGTT 31665 Query 105050 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAG-AGACAAAG-----ACA 105103 || || | |||||| | || | || | | | | ||| | ||| || | | Sbjct 31664 TGCAATTTAGCATCATTAGCATTACCAACATTTATTGATATTGAAGATAACGTTTCAATT 31605 Query 105104 TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTT 105163 | | ||| | ||||||| || || |||| ||| ||| || |||| | | || Sbjct 31604 TATAATTTTCAAAAACTTCATGATATTACAAAAGTTGTTGTTCGTAATTTAAATAAAATT 31545 Query 105164 ATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 105223 |||||||| |||| ||| || ||| || | || || ||||||||||| | ||| Sbjct 31544 ATTGATAGGAATTATTATCCAGTTATTGAAGCAAGAAATTCAAATATGAGACATAGACCA 31485 Query 105224 ATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTT 105280 |||| | | |||||||| ||| | || |||| || || |||| || | ||||| Sbjct 31484 ATTGCTTTAGGTGTTCAAGGTTTAGCTGATGCTTTTATGTGTCTTCGTTTAC---CATTT 31428 Query 105281 GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCT 105340 ||||| ||||| || | | || | |||||||| || || ||||| || ||| Sbjct 31427 GATTCACCTGAAGCTAAATTATTAAACATTCAAATATTTGAAACTATTTATCATGCTGCT 31368 Query 105341 CTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 105400 |||| || | || || ||| | | || ||||||||||| | ||| || || Sbjct 31367 GTTGAAGCATCATGTGAATTAGCAAAAGAATTAGGACCATATGAAACTTATGAAGGATCA 31308 Query 105401 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCAC--T 105458 ||| | || ||||| | | |||| |||| | | |||| || ||||| || || | Sbjct 31307 CCAACATCTCAAGGTATTTTACAATATGATTTAT-GGAATGTTCAACCAA-CTGAACTTT 31250 Query 105459 ACGACTGGGAAGCTCTCAAGGAACGCA--TCAAGGAGAAGGGTCTTCGTAACAGTCTCCT 105516 || ||||| | || || | |||| | | ||| | | || || || Sbjct 31249 GGGATTGGGATTTATTGAAACAAAAAATGTCAA--AATATGGTTTAAGAAATTCACTTCT 31192 Query 105517 CATGGCTCCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAATGCTTTG 105575 | || |||||||||||||| || || |||||| |||||| | ||||||||| |||| Sbjct 31191 TGTTGCACCAATGCCAACAGCATCAACATCACAAATTCTTGGAT-TTAATGAATGTTTTG 31133 Query 105576 AACCCTACACGACGAACATCTATCTGAGAAGA 105607 |||| || || | || || ||| |||||| Sbjct 31132 AACCATATACTTCAAATATTTATAGTAGAAGA 31101 >seq14 Length=670130 Score = 98.7 bits (108), Expect = 1e-15 Identities = 376/580 (65%), Gaps = 13/580 (2%) Strand=Plus/Plus Query 94384 TTCCCCCTGAAGTATCCAC-ACCTCTGGGAACTCTATAAGAAGGCTCAAATGAGTAATTG 94442 ||||| | |||| ||||| | ||||| || | ||||| |||||| || | || Sbjct 577728 TTCCCAATTAAGT-TCCACGAGATCTGGCAAATGTATAAAAAGGCTGAAGCATCTTTCTG 577786 Query 94443 GACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACT---CTAAATGA 94499 |||||||||||| | ||| | || ||| | | |||||| | | | || ||| | Sbjct 577787 GACTGCTGAAGAAATTGATTTAAGTAAAGATATTGGTGATTGGGAAAATAAGCTTAATAA 577846 Query 94500 AAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATTGT 94559 | |||| || || | | || | || || || |||| || ||||| ||||| Sbjct 577847 AGATGAGCGTTTTTTTATTTCACGCGTCTTAGCCTTTTTCGCTGCTTCAGATGGTATTGT 577906 Query 94560 TTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCAATCCTCTGAAGCGAGATCCTT 94619 | || ||| | | | |||||| | | |||||| ||| | | ||||| | | ||| Sbjct 577907 TAACGAAAATTTAGTTGAAAACTTTTCGGCTGAGGTTCAAACACCAGAAGCTAAGTGCTT 577966 Query 94620 CTATGCGTATCAGTGTCATAATG-AAATGGTGCATGGGGAGACATA--CAGTAAACTCAT 94676 |||| || || |||| ||| ||| | || |||||||| || || | || Sbjct 577967 TTATG-GTTTCCAAATCATGATGGAAAATATACACTCTGAGACATATTCACTAT--TAAT 578023 Query 94677 AGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGT 94736 |||| |||||||| ||| | ||| | | || | || || ||| || Sbjct 578024 TGACACATATATTAAAGATTCTAAAGAGCGTGAATTTTTATTCAATGCTATTGAAAATGT 578083 Query 94737 TCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCGTT 94795 ||| |||||| | ||||| || ||||||||| | | ||| || | | || | || || Sbjct 578084 TCCTTGTATTAAGAAGAAGGCAGATTGGGCTTTAAGATGGATTAGTGATAAGGAAGCATT 578143 Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 |||||||| || || | || || || |||||| ||||| || ||||||||||| | Sbjct 578144 A-TTTGCTGAACGTCTTGTTGCTTTCGCTGCTGTTGAAGGTATTTTTTTCTCTGGTTCTT 578202 Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915 || |||||| ||| | || ||| ||||| | |||||||| || || || || | Sbjct 578203 TCGCATCTATTTTCTGGTTAAAAAAGAGAGGTTTAATGCCAGGCCTTACTTTTTCTAATG 578262 Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 | | |||| |||||| || || || ||| || ||||| Sbjct 578263 AATTGATCTGTCGTGATGAAGGTCTTCACACTGATTTTGC 578302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259808456640