Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq8 134 9e-27
seq21 129 4e-25
seq5 123 2e-23
seq12 98.7 6e-16
>seq8
Length=1087023
Score = 134 bits (148), Expect = 9e-27
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| |||||||| | |||| |||||||||||||| || || ||
Sbjct 676686 CCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGAT 676745
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| || || ||||||| | ||||||||||||||| ||||| | |||||||| || ||
Sbjct 676746 AAGGTACGTCCGTCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGA 676805
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||| ||||||||| ||| ||||| ||||| | ||| ||||| | || ||
Sbjct 676806 ATTCCTTCCTTGTCT-TGAATTTTTGACTTAACATTGTCAATAGTGTCAGAGGATTCAAC 676864
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | || || ||||||||||| || ||||| || || ||||||||
Sbjct 676865 CTCGAGAGTAATGGTTTTACCGGTCAAGGTTTTGACGAAGATCTGCAT 676912
>seq21
Length=453462
Score = 129 bits (142), Expect = 4e-25
Identities = 146/193 (76%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574
||||||||| ||||| ||||| || | || || | ||||| ||||||||||| |||||
Sbjct 371715 CTCCTTTTGGATGTTGTAATCAGATAAAGTACGACCATCTTCTAGTTGTTTACCAGCAAA 371656
Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634
|||||||| ||||| || || || | ||| ||||||||| |||| |||| ||||||
Sbjct 371655 AATTAAACGTTGTTGATCTGGGGGAATTCCTTCCTTGTCTTGGATC-TTTGATTTAACAT 371597
Query 34635 TA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693
|| ||||| || | || || || | || || |||||||| |||| ||| || |
Sbjct 371596 TATCGATTGTATCACTGGATTCGACCTCAAGAGTGATGGTTTTACCCGTTAGCGTCTTGA 371537
Query 34694 CAAAAATCTGCAT 34706
|||||||||||||
Sbjct 371536 CAAAAATCTGCAT 371524
>seq5
Length=1301127
Score = 123 bits (136), Expect = 2e-23
Identities = 168/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| |||||||| | ||| |||||||| ||||| ||||| ||
Sbjct 1173646 CCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAATCAGAT 1173705
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| || || | ||||| | ||| ||||| ||||| |||||||| |||||||| || ||
Sbjct 1173706 AAAGTACGTCCATCTTCTAATTGCTTACCAGCAAAGATTAAACGTTGTTGGTCTGGAGGG 1173765
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658
| ||| |||||||| ||||||| | ||||| | ||| || || ||| ||
Sbjct 1173766 ATTCCTTCCTTGTCCTGGATCTTT-GACTTAACATTGTCAATAGTATCGGATGACTCTAC 1173824
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
|| | ||| || || |||||||| | ||||| |||||||||||||| |||
Sbjct 1173825 CTCGAGGGTAATAGTCTTACCGGTAAGGGTTTTGACAAAAATCTGCATCTTG 1173876
>seq12
Length=712717
Score = 98.7 bits (108), Expect = 6e-16
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
|||||||| | ||| |||||||| ||||| || || || | || || | |||||
Sbjct 150943 ACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAGTCAGATAAGGTACGGCCATCTTCC 151002
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
| ||| ||||| ||||| || ||||| ||||| || || || | ||||||||| |||
Sbjct 151003 AATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATTCCCTCCTTATCTTGA 151062
Query 34618 ATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676
|||||| | ||| || || ||| ||||| ||| || || | || || || ||
Sbjct 151063 ATCTTT-GATTTGACATTATCAATAGTGTCAGATGACTCAACCTCAAGAGTAATTGTCTT 151121
Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709
|| || | ||||| |||||||||||||| ||
Sbjct 151122 CCCTGTAAGGGTTTTAACAAAAATCTGCATTTT 151154
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729078335688
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |