Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq8 163 2e-35
seq12 152 4e-32
seq5 143 2e-29
seq21 136 3e-27
>seq8
Length=1087023
Score = 163 bits (180), Expect = 2e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| ||||||| || | |||||||| || || ||| | ||
Sbjct 676912 ATGCAGATCTTCGTCAAAACCTTGACCGGTAAAACCATTACTCTCGAGGTTGAATCCTCT 676853
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || ||||||||||||||| ||||| || || || || |||
Sbjct 676852 GACACTATTGACAATGTTAAGTCAAAAATTCAAGACAAGGAAGGAATTCCTCCAGACCAA 676793
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | ||||| | ||||| |||||||| |||||| | ||| | || || ||||||
Sbjct 676792 CAAAGATTAATCTTTGCCGGTAAACAATTAGAAGACGGACGTACCTTATCTGACTACAAC 676733
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||||||||| || || ||||||||||||||| | || | ||||| ||
Sbjct 676732 ATTCAAAAGGAATCCACTTTACATTTGGTTTTGAGATTAAGAGGTGGTAT 676683
>seq12
Length=712717
Score = 152 bits (168), Expect = 4e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| ||||| || || || ||| | ||||||||||| || || | ||
Sbjct 151151 ATGCAGATTTTTGTTAAAACCCTTACAGGGAAGACAATTACTCTTGAGGTTGAGTCATCT 151092
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | |||||| ||| |||||||| || || || || || || ||||||
Sbjct 151091 GACACTATTGATAATGTCAAATCAAAGATTCAAGATAAGGAGGGAATTCCTCCAGATCAA 151032
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||||| || | || || || ||||||||||| | ||| | || || ||||||
Sbjct 151031 CAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGATGGCCGTACCTTATCTGACTACAAC 150972
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| |||||||| || || |||||||||||| | | ||| | |||||
Sbjct 150971 ATCCAAAAGGAATCAACTTTACATTTGGTTCTCAGATTGAGAGGTGG 150925
>seq5
Length=1301127
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| ||||| || ||||| ||| ||||||| || || || || | |||
Sbjct 1173872 ATGCAGATTTTTGTCAAAACCCTTACCGGTAAGACTATTACCCTCGAGGTAGAGTCATCC 1173813
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || || ||| || || ||||| ||||| || || || || |||
Sbjct 1173812 GATACTATTGACAATGTTAAGTCAAAGATCCAGGACAAGGAAGGAATCCCTCCAGACCAA 1173753
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| |||||||| | || || || ||||| ||||| | || | || |||||||||
Sbjct 1173752 CAACGTTTAATCTTTGCTGGTAAGCAATTAGAAGATGGACGTACTTTATCTGATTACAAC 1173693
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| |||||||| || || ||||||||||||||| | || | |||||
Sbjct 1173692 ATCCAAAAGGAATCAACTTTACATTTGGTTTTGAGATTAAGAGGTGG 1173646
>seq21
Length=453462
Score = 136 bits (150), Expect = 3e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || || || || || | || |||||||| || ||| |
Sbjct 371524 ATGCAGATTTTTGTCAAGACGCTAACGGGTAAAACCATCACTCTTGAGGTCGAATCCAGT 371583
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || ||| ||| || |||||||| ||||| || || || ||||||
Sbjct 371584 GATACAATCGATAATGTTAAATCAAAGATCCAAGACAAGGAAGGAATTCCCCCAGATCAA 371643
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| |||||||| | || || |||||| | ||||| || || | || |||||||||
Sbjct 371644 CAACGTTTAATTTTTGCTGGTAAACAACTAGAAGATGGTCGTACTTTATCTGATTACAAC 371703
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| |||||||| |||||||| | || | ||||| ||
Sbjct 371704 ATCCAAAAGGAGTCTACCTTACACTTGGTTTTAAGATTAAGAGGTGGTAT 371753
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434917660638720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |