Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq21 147 5e-30 seq12 138 3e-27 seq5 138 3e-27 seq8 131 4e-25 >seq21 Length=453462 Score = 147 bits (162), Expect = 5e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||| || | ||| | || ||||| ||||||||||| ||||| | | || | || Sbjct 371739 TCTTAAAACCAAGTGTAAGGTAGACTCCTTTTGGATGTTGTAATCAGATAAAGTACGACC 371680 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| || || || || || || || | |||||||| || || |||| ||||||||| Sbjct 371679 ATCTTCTAGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGGGGAATTCCTTCCTT 371620 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| ||||||||| ||| || || ||||| || ||| | ||| ||||| |||||||| Sbjct 371619 GTCTTGGATCTTTGATTTAACATTATCGATTGTATCACTGGATTCGACCTCAAGAGTGAT 371560 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| || ||||| ||||| | |||||| Sbjct 371559 GGTTTTACCCGTTAGCGTCTTGACAAAAATCTGCAT 371524 >seq12 Length=712717 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || | || | ||| || || ||||||||||| || || | | ||| | || Sbjct 150936 TCTGAGAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAGTCAGATAAGGTACGGCC 150995 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| ||||| || || || || | |||||||| || ||||||| ||| ||||| Sbjct 150996 ATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATTCCCTCCTT 151055 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || || |||||| ||| || || || || |||||||| |||||||| ||||| || Sbjct 151056 ATCTTGAATCTTTGATTTGACATTATCAATAGTGTCAGATGACTCAACCTCAAGAGTAAT 151115 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || || || || || ||||| | ||||||||| Sbjct 151116 TGTCTTCCCTGTAAGGGTTTTAACAAAAATCTGCATTTT 151154 >seq5 Length=1301127 Score = 138 bits (152), Expect = 3e-27 Identities = 151/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976 ||| || || ||||||||||| ||||| | | || | ||||||||| | ||||| || Sbjct 1173675 AGTTGATTCCTTTTGGATGTTGTAATCAGATAAAGTACGTCCATCTTCTAATTGCTTACC 1173734 Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036 || ||||| | ||||||||||| ||||| | |||||||||||||||||||||| || Sbjct 1173735 AGCAAAGATTAAACGTTGTTGGTCTGGAGGGATTCCTTCCTTGTCCTGGATCTTTGACTT 1173794 Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096 || || || || || || || || |||||||| || || ||||| || || || || Sbjct 1173795 AACATTGTCAATAGTATCGGATGACTCTACCTCGAGGGTAATAGTCTTACCGGTAAGGGT 1173854 Query 211097 CTTTACAAACACCTGCATTTT 211117 || ||||| | |||||| || Sbjct 1173855 TTTGACAAAAATCTGCATCTT 1173875 >seq8 Length=1087023 Score = 131 bits (144), Expect = 4e-25 Identities = 150/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976 |||||| || ||||| ||||| || || | | ||| | ||| ||||| | || || || Sbjct 676715 AGTGGATTCCTTTTGAATGTTGTAGTCAGATAAGGTACGTCCGTCTTCTAATTGTTTACC 676774 Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036 || ||||| | | ||||||||| ||||||| |||||||||||| || || ||| || Sbjct 676775 GGCAAAGATTAATCTTTGTTGGTCTGGAGGAATTCCTTCCTTGTCTTGAATTTTTGACTT 676834 Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096 || || || || ||||||||| ||||||||||||||| || || || || || | || Sbjct 676835 AACATTGTCAATAGTGTCAGAGGATTCAACCTCGAGAGTAATGGTTTTACCGGTCAAGGT 676894 Query 211097 CTTTACAAACACCTGCATTTTA 211118 || || || | ||||||| || Sbjct 676895 TTTGACGAAGATCTGCATTGTA 676916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159149980177640