Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq21 147 5e-30
seq12 138 3e-27
seq5 138 3e-27
seq8 131 4e-25
>seq21
Length=453462
Score = 147 bits (162), Expect = 5e-30
Identities = 162/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||||| || | ||| | || ||||| ||||||||||| ||||| | | || | ||
Sbjct 371739 TCTTAAAACCAAGTGTAAGGTAGACTCCTTTTGGATGTTGTAATCAGATAAAGTACGACC 371680
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||| || || || || || || || | |||||||| || || |||| |||||||||
Sbjct 371679 ATCTTCTAGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGGGGAATTCCTTCCTT 371620
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| ||||||||| ||| || || ||||| || ||| | ||| ||||| ||||||||
Sbjct 371619 GTCTTGGATCTTTGATTTAACATTATCGATTGTATCACTGGATTCGACCTCAAGAGTGAT 371560
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| || ||||| ||||| | ||||||
Sbjct 371559 GGTTTTACCCGTTAGCGTCTTGACAAAAATCTGCAT 371524
>seq12
Length=712717
Score = 138 bits (152), Expect = 3e-27
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| || || | || | ||| || || ||||||||||| || || | | ||| | ||
Sbjct 150936 TCTGAGAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAGTCAGATAAGGTACGGCC 150995
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| ||||| || || || || | |||||||| || ||||||| ||| |||||
Sbjct 150996 ATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATTCCCTCCTT 151055
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
|| || |||||| ||| || || || || |||||||| |||||||| ||||| ||
Sbjct 151056 ATCTTGAATCTTTGATTTGACATTATCAATAGTGTCAGATGACTCAACCTCAAGAGTAAT 151115
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| || || || || || ||||| | |||||||||
Sbjct 151116 TGTCTTCCCTGTAAGGGTTTTAACAAAAATCTGCATTTT 151154
>seq5
Length=1301127
Score = 138 bits (152), Expect = 3e-27
Identities = 151/201 (75%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976
||| || || ||||||||||| ||||| | | || | ||||||||| | ||||| ||
Sbjct 1173675 AGTTGATTCCTTTTGGATGTTGTAATCAGATAAAGTACGTCCATCTTCTAATTGCTTACC 1173734
Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036
|| ||||| | ||||||||||| ||||| | |||||||||||||||||||||| ||
Sbjct 1173735 AGCAAAGATTAAACGTTGTTGGTCTGGAGGGATTCCTTCCTTGTCCTGGATCTTTGACTT 1173794
Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096
|| || || || || || || || |||||||| || || ||||| || || || ||
Sbjct 1173795 AACATTGTCAATAGTATCGGATGACTCTACCTCGAGGGTAATAGTCTTACCGGTAAGGGT 1173854
Query 211097 CTTTACAAACACCTGCATTTT 211117
|| ||||| | |||||| ||
Sbjct 1173855 TTTGACAAAAATCTGCATCTT 1173875
>seq8
Length=1087023
Score = 131 bits (144), Expect = 4e-25
Identities = 150/202 (74%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976
|||||| || ||||| ||||| || || | | ||| | ||| ||||| | || || ||
Sbjct 676715 AGTGGATTCCTTTTGAATGTTGTAGTCAGATAAGGTACGTCCGTCTTCTAATTGTTTACC 676774
Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036
|| ||||| | | ||||||||| ||||||| |||||||||||| || || ||| ||
Sbjct 676775 GGCAAAGATTAATCTTTGTTGGTCTGGAGGAATTCCTTCCTTGTCTTGAATTTTTGACTT 676834
Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096
|| || || || ||||||||| ||||||||||||||| || || || || || | ||
Sbjct 676835 AACATTGTCAATAGTGTCAGAGGATTCAACCTCGAGAGTAATGGTTTTACCGGTCAAGGT 676894
Query 211097 CTTTACAAACACCTGCATTTTA 211118
|| || || | ||||||| ||
Sbjct 676895 TTTGACGAAGATCTGCATTGTA 676916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159149980177640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |