Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq21 165 6e-36 seq12 152 3e-32 seq5 149 4e-31 >seq21 Length=453462 Score = 165 bits (182), Expect = 6e-36 Identities = 175/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || || ||||| ||||| |||||||| || || || |||| Sbjct 371524 ATGCAGATTTTTGTCAAGACGCTAACGGGTAAAACCATCACTCTTGAGGTCGAATCCAGT 371583 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | || ||| ||||| | ||| || ||||| ||||| | || |||||||| Sbjct 371584 GATACAATCGATAATGTTAAATC-AAAGATCCAAGACAAGGAAGGAATTCCCCCAGATCA 371642 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| |||||||| ||||| || |||||||| ||||| | || |||||| |||||||| Sbjct 371643 ACAACGTTTAATTTTTGCTGGTAAACAACTAGAAGATGGTCGTACTTTATCTGATTACAA 371702 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| ||||| ||||| || ||||| || |||||||| || |||| || Sbjct 371703 CATCCAAAAGGAGTCTACCTTACACTTGGTTTTAAGATTAAGAGGTGG 371750 >seq12 Length=712717 Score = 152 bits (168), Expect = 3e-32 Identities = 174/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 |||||||||||||| ||||||||||| || || || || || ||||| || ||||| || Sbjct 151154 AAAATGCAGATTTTTGTTAAAACCCTTACAGGGAAGACAATTACTCTTGAGGTTGAGTCA 151095 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | |||||| |||| ||| | ||| |||| | || || || || || | || ||||| Sbjct 151094 TCTGACACTATTGATAATGTCAAATCAAAGA-TTCAAGATAAGGAGGGAATTCCTCCAGA 151036 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 |||||| ||||| || ||||| || || ||| ||||||| | || || ||| || || Sbjct 151035 TCAACAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGATGGCCGTACCTTATCTGACTA 150976 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 |||||| ||||| || || || |||||||| ||| | || ||| |||| || Sbjct 150975 CAACATCCAAAAGGAATCAACTTTACATTTGGTTCTCAGATTGAGAGGTGG 150925 >seq5 Length=1301127 Score = 149 bits (164), Expect = 4e-31 Identities = 173/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||||||||| || |||||||| || || || || || || ||||| || || || Sbjct 1173875 AAGATGCAGATTTTTGTCAAAACCCTTACCGGTAAGACTATTACCCTCGAGGTAGAGTCA 1173816 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | || ||| |||| ||| |||| |||| | | ||||| ||||| | || ||||| Sbjct 1173815 TCCGATACTATTGACAATGTTAAGTCAAAGA-TCCAGGACAAGGAAGGAATCCCTCCAGA 1173757 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 ||||| |||||||| ||||| || || ||| | ||||| | ||| |||||| ||||| Sbjct 1173756 CCAACAACGTTTAATCTTTGCTGGTAAGCAATTAGAAGATGGACGTACTTTATCTGATTA 1173697 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 |||||| ||||| || || || |||||||| ||||| || || |||| || Sbjct 1173696 CAACATCCAAAAGGAATCAACTTTACATTTGGTTTTGAGATTAAGAGGTGG 1173646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009039749088