Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq21 165 6e-36
seq12 152 3e-32
seq5 149 4e-31
>seq21
Length=453462
Score = 165 bits (182), Expect = 6e-36
Identities = 175/228 (77%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || || || || ||||| ||||| |||||||| || || || ||||
Sbjct 371524 ATGCAGATTTTTGTCAAGACGCTAACGGGTAAAACCATCACTCTTGAGGTCGAATCCAGT 371583
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || | || ||| ||||| | ||| || ||||| ||||| | || ||||||||
Sbjct 371584 GATACAATCGATAATGTTAAATC-AAAGATCCAAGACAAGGAAGGAATTCCCCCAGATCA 371642
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| |||||||| ||||| || |||||||| ||||| | || |||||| ||||||||
Sbjct 371643 ACAACGTTTAATTTTTGCTGGTAAACAACTAGAAGATGGTCGTACTTTATCTGATTACAA 371702
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| ||||| ||||| || ||||| || |||||||| || |||| ||
Sbjct 371703 CATCCAAAAGGAGTCTACCTTACACTTGGTTTTAAGATTAAGAGGTGG 371750
>seq12
Length=712717
Score = 152 bits (168), Expect = 3e-32
Identities = 174/231 (75%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|||||||||||||| ||||||||||| || || || || || ||||| || ||||| ||
Sbjct 151154 AAAATGCAGATTTTTGTTAAAACCCTTACAGGGAAGACAATTACTCTTGAGGTTGAGTCA 151095
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| |||||| |||| ||| | ||| |||| | || || || || || | || |||||
Sbjct 151094 TCTGACACTATTGATAATGTCAAATCAAAGA-TTCAAGATAAGGAGGGAATTCCTCCAGA 151036
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
|||||| ||||| || ||||| || || ||| ||||||| | || || ||| || ||
Sbjct 151035 TCAACAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGATGGCCGTACCTTATCTGACTA 150976
Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|||||| ||||| || || || |||||||| ||| | || ||| |||| ||
Sbjct 150975 CAACATCCAAAAGGAATCAACTTTACATTTGGTTCTCAGATTGAGAGGTGG 150925
>seq5
Length=1301127
Score = 149 bits (164), Expect = 4e-31
Identities = 173/231 (75%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| ||||||||||| || |||||||| || || || || || || ||||| || || ||
Sbjct 1173875 AAGATGCAGATTTTTGTCAAAACCCTTACCGGTAAGACTATTACCCTCGAGGTAGAGTCA 1173816
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| || ||| |||| ||| |||| |||| | | ||||| ||||| | || |||||
Sbjct 1173815 TCCGATACTATTGACAATGTTAAGTCAAAGA-TCCAGGACAAGGAAGGAATCCCTCCAGA 1173757
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
||||| |||||||| ||||| || || ||| | ||||| | ||| |||||| |||||
Sbjct 1173756 CCAACAACGTTTAATCTTTGCTGGTAAGCAATTAGAAGATGGACGTACTTTATCTGATTA 1173697
Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|||||| ||||| || || || |||||||| ||||| || || |||| ||
Sbjct 1173696 CAACATCCAAAAGGAATCAACTTTACATTTGGTTTTGAGATTAAGAGGTGG 1173646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009039749088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |