Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq14 340 2e-88 >seq14 Length=670130 Score = 340 bits (376), Expect = 2e-88 Identities = 613/887 (69%), Gaps = 13/887 (1%) Strand=Plus/Plus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 ||||| || || || |||| |||||| ||||||||||| || || | | ||||||||| Sbjct 211681 TTTTGATAATCTGAAACTCTCTTTTCAAAGAAATTAGTCTTACCAACAAGAGAAATATTT 211740 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTT---AGAGCTACA 4373 |||||||| || || ||||| || || | ||| |||| | ||| | ||| || Sbjct 211741 TCCATAAAGTCGAAAGGATTTGTAGCATCATAAACCTTTTTA---TTTCCCAAAGCAACG 211797 Query 4374 AGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATT 4433 ||||||| ||||| ||| |||| || || || | ||| | ||||| || || |||| | Sbjct 211798 AGCAATCTATCAGCAACATATTCAATGTATTGACACATCAAGTCGCAATTCATACCAAGT 211857 Query 4434 AATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATT 4493 ||| ||||| || || | || || | |||| ||| || || ||||| |||| Sbjct 211858 AATGAGACAGGAAGAGCCTCGGTAAAGTATTCTTTTTCAATCACAACAGCTTCAGTGACA 211917 Query 4494 ATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCA 4553 || | | | || || | ||||||||| |||| | || |||||||| || Sbjct 211918 ATTTTCTCGACAATAGCTGGATCAGGTTTATTTTGCAAGTGAGCGAATAATAAACATCCA 211977 Query 4554 AAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGC 4613 ||||| ||| | |||||| |||| | || ||||| |||||||| ||||| || ||| Sbjct 211978 AAATCTGTATGTAGACCTTCATCTCGACAGATAAGTTCATTAGAAAAGGTTAAACCAGGC 212037 Query 4614 ATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCT 4673 ||||||||||||||||| | ||||||||| || |||||||| ||||| || |||| ||| Sbjct 212038 ATTAAACCTCTCTTTTTCAACCAAAATATGGCAGCAAATGATCCAGAGAAAAATACACCT 212097 Query 4674 TCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGA-GCTGGCTTTGTCTTTAATCCA 4732 || | | ||||| || |||||||| ||| || | ||| | | ||| |||||||| Sbjct 212098 TCAATAGTTGCAAAAGCAACTAATCGTTCCCCAAATAATGCT-TCATCGTCGTTAATCCA 212156 Query 4733 TTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAA 4792 ||| || | ||||| ||| || | || | || || || || || || || || || Sbjct 212157 TTTCAAAGTCCAGTCAGCCTTCTGTTTGATACATGGGATGTTGACAATTGCATT-AAGAA 212215 Query 4793 TTTACT-TTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAG 4851 | | |||||||| |||||| ||| ||||| |||| ||| || |||||| Sbjct 212216 GAAAGTCTTTTTCAATAGGGTCTCTAATGTAAGTATCTAACTGTACAGAGTAAGTTTCAG 212275 Query 4852 AATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAA 4911 |||||||||||||| | ||||| || || || || | | | ||||| | | ||||| Sbjct 212276 AATGTATATTTTCTGTCATGATCTGGAACCCATAGAAACTTTTGGCTTCAGGAATTTGAA 212335 Query 4912 CTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAA 4971 | || |||| | || ||||| ||||| || || | ||| ||| |||||||||| Sbjct 212336 CCTCTGCTGAAAAGTTCTCAACTAAATTTTCATTAACAAGACCATCAGATGCTGCAAAAA 212395 Query 4972 ACGCCAAAACATGAGATATAAAGTA-CTGTTCGTCAGGCTTAAGTT--TTTTCCAGTGGG 5028 | ||||| || || |||||| | || | | | |||| || | | ||||| | Sbjct 212396 AAGCCAATACTCTTGAGATAAAGAATCTCTCATTTTCGTTTAACTTAGTGTCCCAGTCAG 212455 Query 5029 GCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGT 5088 | | ||| |||| | ||||| ||| || |||||| || || || || || |||| Sbjct 212456 GTATATCCTTAGCAAGATCAATTTCCTCTGTAGTCCAGAAGGAAGCCTCGTGCTTCTTGT 212515 Query 5089 ACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCTG 5135 |||| |||||| ||| ||| | ||| |||| || ||||||||| Sbjct 212516 ACATTTGCCAAATTTCACCATATTTAATTGGAAACATAACAAATCTG 212562 Score = 327 bits (362), Expect = 1e-84 Identities = 617/898 (69%), Gaps = 17/898 (2%) Strand=Plus/Minus Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306 |||||| |||||| || || || |||| ||| ||||| || || || || || |||| Sbjct 578606 AACACCGGCTTTTTGATAATCAGAAACTCTCTTCTCGAAAAAGTTTGTCTTACCAGCTAA 578547 Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAA-TGTTTTTCACACTTTA 4365 |||||||| ||||| || ||||| |||||||| | |||||| | || || || | | Sbjct 578546 TGAAATATTCTCCATGAAGTCAAATGGATTAGTAACATTGTAAATCTTCTTGTTACCT-A 578488 Query 4366 GAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAA 4425 |||| || | | || || || ||| |||| | ||| || | ||| | | ||| || | Sbjct 578487 GAGCAACTAAAAGACGATCGGCAACATATTCAACATATTGACACATCAAATTGCAATTCA 578428 Query 4426 TTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTT 4485 | |||| |||| | || || || | ||| || | || | || |||||||| || | Sbjct 578427 TACCAAGTAATGAGGCTGGAAGAGCATCTGTAAAGTATTCCTTCTCAATAGTTACAGCCT 578368 Query 4486 CTGTGATTATATCTTTTATTTTATCTTTAGAT--GGTTTATTTACTAAGTATCCAAACAA 4543 |||| ||||| ||||| || || ||| ||| ||||| | || | ||| || Sbjct 578367 CTGTAATTAT--CTTTTCAACAATAATTGGATCGGGTCTATTTTCCAAATGGGAAAATAA 578310 Query 4544 TAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGT 4603 ||| || ||||||||| || | |||||| || | | |||| ||| |||||||| || Sbjct 578309 TAAGCAAGCAAAATCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTAGAAAAAGT 578250 Query 4604 TAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAA 4663 | || |||||||||||||||||||| | ||| || |||| || || || ||||| || Sbjct 578249 AAGGCCTGGCATTAAACCTCTCTTTTTTAACCAGAAAATAGATGCGAAAGAACCAGAGAA 578190 Query 4664 GAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGA-GCTGGCTTTGT 4722 || || ||||| || || || || || || | || | || | ||| | || | Sbjct 578189 AAAAATACCTTCAACAGCAGCGAAAGCAACAAGACGTTCAGCAAATAATGCT-TCCTTAT 578131 Query 4723 CTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAG 4782 | |||||||| |||| ||||| | || || ||||||| || |||| | | |||| Sbjct 578130 CACTAATCCATCTTAAAGCCCAATCTGCCTTCTTCTTAATACAAGGAACATTTTCAATAG 578071 Query 4783 CGTTAAAT---AATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGC 4839 | || ||| |||| || | || | | |||| |||||| ||||| |||| ||| Sbjct 578070 CATTGAATAAAAATTCACGCTCTTTA---GAATCTTTAATATATGTGTCAATTAATAGTG 578014 Query 4840 TATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTT 4899 ||| | ||||| ||||||||||| || || || || || |||||||| |||||| Sbjct 578013 AATATGTCTCAGAGTGTATATTTTCCATCATGATTTGGAAACCATAAAAGCACTTAGCTT 577954 Query 4900 CTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCAC 4959 ||| | |||||| || |||| |||| ||||| |||||||| || ||||| || Sbjct 577953 CTGGTGTTTGAACCTCAGCCGAAAAGTTTTCAACTAAATTTTCGTTAACAATACCATCTG 577894 Query 4960 TGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAG---TT 5016 || || ||||| || || || | || ||||| | | || || ||||| | Sbjct 577893 AAGCAGCGAAAAAGGCTAAGACGCGTGAAATAAAAAAACGCTCATCTTTATTAAGCTTAT 577834 Query 5017 TTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTT 5076 ||| ||| | | ||||||| ||||||||| ||||||| ||||||| || || |||| Sbjct 577833 TTTCCCAATCACCAATATCTTTACTTAAATCAATTTCTTCAGCAGTCCAGAAAGATGCTT 577774 Query 5077 CCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134 | || ||||| ||||| ||| || || | ||| ||| || | | ||||||||| Sbjct 577773 CAGCCTTTTTATACATTTGCCAGATCTCGTGGAACTTAATTGGGAAGAGGACAAATCT 577716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427048892165288