Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq8 109 1e-18
seq21 105 2e-17
seq12 102 2e-16
seq5 98.7 2e-15
>seq8
Length=1087023
Score = 109 bits (120), Expect = 1e-18
Identities = 149/208 (72%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960
||| | ||| || || ||||| |||||||| || | ||| || | || |||||||
Sbjct 676709 ATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGATAAGGTACGTCCGTCTTCTAATTG 676768
Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
||| ||||| ||||| | || || ||||| | | ||||||||||| |||||||||||
Sbjct 676769 TTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGAATTCCTTCCTTGTCTTGAATTTT 676828
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080
| || ||| | || | |||| || || || || |||||||| ||||| || ||
Sbjct 676829 TGACTTAACATTGTCAATAGTGTCAGAGGATTCAACCTCGAGAGTAATGGTTTTACCGGT 676888
Query 152081 GAGAGTCTTCACGAAGACCTGCATTTTA 152108
| || || ||||||| ||||||| ||
Sbjct 676889 CAAGGTTTTGACGAAGATCTGCATTGTA 676916
>seq21
Length=453462
Score = 105 bits (116), Expect = 2e-17
Identities = 144/199 (72%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967
|||||||| ||||||||||||||||| | |||||| | ||||||||||| ||| ||
Sbjct 371720 GTAGACTCCTTTTGGATGTTGTAATCAGATAAAGTACGACCATCTTCTAGTTGTTTACCA 371661
Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027
|| || || | | || || || | | ||||||||||| ||||| || ||| |||
Sbjct 371660 GCAAAAATTAAACGTTGTTGATCTGGGGGAATTCCTTCCTTGTCTTGGATCTTTGATTTA 371601
Query 152028 ACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAG 152085
||| | || | | | ||| | || || |||||||| || ||||| ||||| || |
Sbjct 371600 ACATTATCGATTGTATCACTGGA--TTCGACCTCAAGAGTGATGGTTTTACCCGTTAGCG 371543
Query 152086 TCTTCACGAAGACCTGCAT 152104
|||| || || | ||||||
Sbjct 371542 TCTTGACAAAAATCTGCAT 371524
>seq12
Length=712717
Score = 102 bits (112), Expect = 2e-16
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
|||||| || | ||| | ||| || || |||||||||||||| || | ||| || | ||
Sbjct 150936 TCTGAGAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAGTCAGATAAGGTACGGCC 150995
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
|||||| | || || || || || | | || || || | | ||||| |||||
Sbjct 150996 ATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATTCCCTCCTT 151055
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
|||||||| ||| ||||||| | || | |||| || ||| || |||||||||||
Sbjct 151056 ATCTTGAATCTTTGATTTGACATTATCAATAGTGTCAGATGACTCAACCTCAAGAGTAAT 151115
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || || || || || || || | |||||||||
Sbjct 151116 TGTCTTCCCTGTAAGGGTTTTAACAAAAATCTGCATTTT 151154
>seq5
Length=1301127
Score = 98.7 bits (108), Expect = 2e-15
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960
||| | ||| || || ||||||||||||||||| | |||||| | ||||||||||
Sbjct 1173669 ATGTAAAGTTGATTCCTTTTGGATGTTGTAATCAGATAAAGTACGTCCATCTTCTAATTG 1173728
Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
|| || || ||||| | | || ||||| | | |||||||||||| || || || ||
Sbjct 1173729 CTTACCAGCAAAGATTAAACGTTGTTGGTCTGGAGGGATTCCTTCCTTGTCCTGGATCTT 1173788
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080
| || ||| | || | | || || |||||| || || |||||||| || || ||
Sbjct 1173789 TGACTTAACATTGTCAATAGTATCGGATGACTCTACCTCGAGGGTAATAGTCTTACCGGT 1173848
Query 152081 GAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || || || | |||||| ||
Sbjct 1173849 AAGGGTTTTGACAAAAATCTGCATCTT 1173875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153818789467256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |