Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq8 109 1e-18 seq21 105 2e-17 seq12 102 2e-16 seq5 98.7 2e-15 >seq8 Length=1087023 Score = 109 bits (120), Expect = 1e-18 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| | ||| || || ||||| |||||||| || | ||| || | || ||||||| Sbjct 676709 ATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGATAAGGTACGTCCGTCTTCTAATTG 676768 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| ||||| ||||| | || || ||||| | | ||||||||||| ||||||||||| Sbjct 676769 TTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGAATTCCTTCCTTGTCTTGAATTTT 676828 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 | || ||| | || | |||| || || || || |||||||| ||||| || || Sbjct 676829 TGACTTAACATTGTCAATAGTGTCAGAGGATTCAACCTCGAGAGTAATGGTTTTACCGGT 676888 Query 152081 GAGAGTCTTCACGAAGACCTGCATTTTA 152108 | || || ||||||| ||||||| || Sbjct 676889 CAAGGTTTTGACGAAGATCTGCATTGTA 676916 >seq21 Length=453462 Score = 105 bits (116), Expect = 2e-17 Identities = 144/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 |||||||| ||||||||||||||||| | |||||| | ||||||||||| ||| || Sbjct 371720 GTAGACTCCTTTTGGATGTTGTAATCAGATAAAGTACGACCATCTTCTAGTTGTTTACCA 371661 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 || || || | | || || || | | ||||||||||| ||||| || ||| ||| Sbjct 371660 GCAAAAATTAAACGTTGTTGATCTGGGGGAATTCCTTCCTTGTCTTGGATCTTTGATTTA 371601 Query 152028 ACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAG 152085 ||| | || | | | ||| | || || |||||||| || ||||| ||||| || | Sbjct 371600 ACATTATCGATTGTATCACTGGA--TTCGACCTCAAGAGTGATGGTTTTACCCGTTAGCG 371543 Query 152086 TCTTCACGAAGACCTGCAT 152104 |||| || || | |||||| Sbjct 371542 TCTTGACAAAAATCTGCAT 371524 >seq12 Length=712717 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 |||||| || | ||| | ||| || || |||||||||||||| || | ||| || | || Sbjct 150936 TCTGAGAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAGTCAGATAAGGTACGGCC 150995 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||| | || || || || || | | || || || | | ||||| ||||| Sbjct 150996 ATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATTCCCTCCTT 151055 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 |||||||| ||| ||||||| | || | |||| || ||| || ||||||||||| Sbjct 151056 ATCTTGAATCTTTGATTTGACATTATCAATAGTGTCAGATGACTCAACCTCAAGAGTAAT 151115 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || || || || || || || | ||||||||| Sbjct 151116 TGTCTTCCCTGTAAGGGTTTTAACAAAAATCTGCATTTT 151154 >seq5 Length=1301127 Score = 98.7 bits (108), Expect = 2e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| | ||| || || ||||||||||||||||| | |||||| | |||||||||| Sbjct 1173669 ATGTAAAGTTGATTCCTTTTGGATGTTGTAATCAGATAAAGTACGTCCATCTTCTAATTG 1173728 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 || || || ||||| | | || ||||| | | |||||||||||| || || || || Sbjct 1173729 CTTACCAGCAAAGATTAAACGTTGTTGGTCTGGAGGGATTCCTTCCTTGTCCTGGATCTT 1173788 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 | || ||| | || | | || || |||||| || || |||||||| || || || Sbjct 1173789 TGACTTAACATTGTCAATAGTATCGGATGACTCTACCTCGAGGGTAATAGTCTTACCGGT 1173848 Query 152081 GAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || || || | |||||| || Sbjct 1173849 AAGGGTTTTGACAAAAATCTGCATCTT 1173875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153818789467256