Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq12 168 1e-36
seq8 167 5e-36
seq21 161 2e-34
seq5 143 6e-29
>seq12
Length=712717
Score = 168 bits (186), Expect = 1e-36
Identities = 176/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | || | || |||| |||||| || ||| |||||||||||||||||||
Sbjct 150924 ACCACCTCTCAATCTGAGAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAGTCAGA 150983
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
| || |||||||| || | ||| || || ||||| |||||||||||||| || ||
Sbjct 150984 TAAGGTACGGCCATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGG 151043
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| |||||||| ||||| ||||||| ||| || |||| |||||||| || | || ||
Sbjct 151044 AATTCCCTCCTTATCTTGAATCTTTGATTTGACATTATCAATAGTGTCAGATGACTCAAC 151103
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| ||||| || ||||| || || | || ||||| || |||||||||||
Sbjct 151104 CTCAAGAGTAATTGTCTTCCCTGTAAGGGTTTTAACAAAAATCTGCATTTT 151154
>seq8
Length=1087023
Score = 167 bits (184), Expect = 5e-36
Identities = 163/210 (78%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| |||||| ||| ||| ||||| ||||||||||||| | || || || || |||
Sbjct 676704 ACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGATAAGGTACGTCCGTCTTCT 676763
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| |||||| ||||||||||| || | ||||||||| ||||| || |||||||||||
Sbjct 676764 AATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGAATTCCTTCCTTGTCTTGA 676823
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
|| |||| || || | || |||||||| || | ||| || |||||||| || || |||
Sbjct 676824 ATTTTTGACTTAACATTGTCAATAGTGTCAGAGGATTCAACCTCGAGAGTAATGGTTTTA 676883
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATT 283100
|| ||||| || || ||||| |||||||||
Sbjct 676884 CCGGTCAAGGTTTTGACGAAGATCTGCATT 676913
>seq21
Length=453462
Score = 161 bits (178), Expect = 2e-34
Identities = 161/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| ||||| || || |||||||||||||| |||| | || || ||||| |||
Sbjct 371732 ACCAAGTGTAAGGTAGACTCCTTTTGGATGTTGTAATCAGATAAAGTACGACCATCTTCT 371673
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
|||||||| || ||||| || ||||||||||| || ||||| || ||||||||||||
Sbjct 371672 AGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGGGGAATTCCTTCCTTGTCTTGG 371613
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||||| ||| || ||||||| || || | |||||| || |||||||| || |||
Sbjct 371612 ATCTTTGATTTAACATTATCGATTGTATCACTGGATTCGACCTCAAGAGTGATGGTTTTA 371553
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| | ||||| || || ||||||||
Sbjct 371552 CCCGTTAGCGTCTTGACAAAAATCTGCAT 371524
>seq5
Length=1301127
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| |||||| || ||| |||||||||||||| |||| | || || ||||| |||
Sbjct 1173664 ACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAATCAGATAAAGTACGTCCATCTTCT 1173723
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || || |||||||| |||||||||||||| || || || |||||||| |||
Sbjct 1173724 AATTGCTTACCAGCAAAGATTAAACGTTGTTGGTCTGGAGGGATTCCTTCCTTGTCCTGG 1173783
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||||| || || | || ||||| || || | || || ||||| || || ||||||
Sbjct 1173784 ATCTTTGACTTAACATTGTCAATAGTATCGGATGACTCTACCTCGAGGGTAATAGTCTTA 1173843
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || | || || || || |||||||| ||
Sbjct 1173844 CCGGTAAGGGTTTTGACAAAAATCTGCATCTT 1173875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046737376056944
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |