Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq14 360 2e-94
>seq14
Length=670130
Score = 360 bits (398), Expect = 2e-94
Identities = 608/872 (70%), Gaps = 19/872 (2%)
Strand=Plus/Minus
Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTT-TCGAAAAAATTTGTCTTACCCT 23263
||||||||| ||||||||| || ||| | |||| |||||||| |||||||||||
Sbjct 578609 CATAACACCGGCTTTTTGATAATCAGAAACTC-TCTTCTCGAAAAAGTTTGTCTTACCAG 578551
Query 23264 CTAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATA-CAGCT--TTAC 23320
||||||| ||||| ||||| || ||||||||||||| | ||| || | | || ||||
Sbjct 578550 CTAATGAAATATTCTCCATGAAGTCAAATGGATTAGTAACATTGTAAATCTTCTTGTTAC 578491
Query 23321 ATGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCAT 23380
|| | |||||| | ||| || ||| |||||| |||||||||||||||||
Sbjct 578490 ---CTAGAGCAACTAAAAGACGATCGGCAACATATTCAACATATTGACACATCAAATTGC 578434
Query 23381 AGTTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAA 23440
| || ||||| | || | |||||| ||||| ||| || || ||||| | |
Sbjct 578433 AATTCATACCAAGTAATGAGGCTGGAAGAGCATCTGTAAAGTATTCCTTCTCAATAGTTA 578374
Query 23441 CAGCATCTTTAATTA---TTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACT 23497
|||| ||| |||||| ||| |||||||| | || ||| || || ||||
Sbjct 578373 CAGCCTCTGTAATTATCTTTTCAACAATAATTGGATC---GGGTCTATTTTCCAAATGGG 578317
Query 23498 TAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAG 23557
||| ||||| || ||||||||| || || |||||||| | || |||||||||||||
Sbjct 578316 AAAATAATAAGCAAGCAAAATCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTAG 578257
Query 23558 AAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATC 23617
|||| || | ||||||||||| |||| ||||| | ||| || || | || || || |
Sbjct 578256 AAAAAGTAAGGCCTGGCATTAAACCTCTCTTTTTTAACCAGAAAATAGATGCGAAAGAAC 578197
Query 23618 CGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCAT 23677
| || || |||||||| |||||||| || || || ||||||||| | ||||| ||| |
Sbjct 578196 CAGAGAAAAAAATACCTTCAACAGCAGCGAAAGCAACAAGACGTTCAGCAAATAATGCTT 578137
Query 23678 TATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTT 23737
| |||| ||||||| || | ||||| |||||| || | ||| || |||
Sbjct 578136 CCTTATCACTAATCCATCTTAAAGCCCAATCTGCCTTCTTCTTAATACAAGGAACATTTT 578077
Query 23738 CAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTA 23797
|||| || || || | ||| |||| | |||| | |||||||| ||||||| ||
Sbjct 578076 CAATAGCATTGAATAAAAATTCACGCTCTTTAGAATCTTTAATATATGTGTCAATTAATA 578017
Query 23798 AACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAG 23857
||| | ||||| || |||||||| || || || || |||||||| || |||
Sbjct 578016 GTGAATATGTCTCAGAGTGTATATTTTCCATCATGATTTGGAAACCATAAAAGCACTTAG 577957
Query 23858 CTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCAT 23917
|||| | |||||| ||| |||| ||| | ||||||||||||||||||||||||
Sbjct 577956 CTTCTGGTGTTTGAACCTCAGCCGAAAAGTTTTCAACTAAATTTTCGTTAACAATACCAT 577897
Query 23918 CACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAA-- 23975
| |||||| || || || | || | |||||| | ||||| || |||
Sbjct 577896 CTGAAGCAGCGAAAAAGGCTAAGACGCGTGAAATAAAAAAACGCTCATC-TTTATTAAGC 577838
Query 23976 --TTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTT 24033
|||| ||||||| ||||||||| |||||||| ||| ||| | ||||| ||| |
Sbjct 577837 TTATTTTCCCAATCACCAATATCTTTACTTAAATCAATTTCTTCAGCAGTCCAGAAAGAT 577778
Query 24034 GCCAAGGCACGCTTATACATTAGCCAAATATC 24065
|| || ||||||||| |||| || ||
Sbjct 577777 GCTTCAGCCTTTTTATACATTTGCCAGATCTC 577746
Score = 306 bits (338), Expect = 4e-78
Identities = 613/901 (68%), Gaps = 17/901 (2%)
Strand=Plus/Plus
Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264
||||||||| | |||||||| || ||| | |||| || ||||| |||||||| |
Sbjct 211668 CATAACACCTGTCTTTTGATAATCTGAAACTCTCTTTTCAAAGAAATTAGTCTTACCAAC 211727
Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGA 23324
| || |||||||||||||| || || ||||| | || || ||| || |||| |
Sbjct 211728 AAGAGAAATATTTTCCATAAAGTCGAAAGGATTTGTAGCATCATAAACCTTTTTATTTCC 211787
Query 23325 TAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTT 23384
|| | | | ||||| || ||| ||||||| |||||||||||||| || | ||
Sbjct 211788 CAAAGCAACGAGCAATCTATCAGCAACATATTCAATGTATTGACACATCAAGTCGCAATT 211847
Query 23385 TATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGC 23444
||||| | || | || |||| || || ||| || ||||||||| ||||||
Sbjct 211848 CATACCAAGTAATGAGACAGGAAGAGCCTCGGTAAAGTATTCTTTTTCAATCACAACAGC 211907
Query 23445 ATCTTT---AATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAA 23501
|| | |||| | | |||||| || ||| ||| || || || | ||
Sbjct 211908 TTCAGTGACAATTTTCTCGACAATAGCTGGATCA---GGTTTATTTTGCAAGTGAGCGAA 211964
Query 23502 CAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAA 23561
||||||||| ||||||| |||||| |||||||| | || || | ||||||||||||
Sbjct 211965 TAATAAACATCCAAAATCTGTATGTAGACCTTCATCTCGACAGATAAGTTCATTAGAAAA 212024
Query 23562 TGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGA 23621
||||| || |||||||| |||| ||||| | ||||||||| |||||||||||||| ||
Sbjct 212025 GGTTAAACCAGGCATTAAACCTCTCTTTTTCAACCAAAATATGGCAGCAAATGATCCAGA 212084
Query 23622 AAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATA 23681
|| || | ||| |||| || ||||| || || | ||| |||||| ||| | ||
Sbjct 212085 GAAAAATACACCTTCAATAGTTGCAAAAGCAACTAATCGTTCCCCAAATAATGCTTCATC 212144
Query 23682 ATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAAT 23741
|| ||||||||| ||||| | ||||||| ||| | ||| || | ||||
Sbjct 212145 GTCGTTAATCCATTTCAAAGTCCAGTCAGCCTTCTGTTTGATACATGGGATGTTGACAAT 212204
Query 23742 TGCTTTTAAGAGAAAAGTTTTTTCTTCATTA---TCTGTTATATATGTATCAATTAGTAA 23798
||| |||||| ||||| ||| |||| || ||| | || || ||||| | |||
Sbjct 212205 TGC-ATTAAGAAGAAAGTCTTT--TTCAATAGGGTCTCTAATGTAAGTATCTAACTGTAC 212261
Query 23799 ACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGC 23858
| || |||||||||| |||||||| | ||||| |||||||| |||| | | ||
Sbjct 212262 AGAGTAAGTTTCAGAATGTATATTTTCTGTCATGATCTGGAACCCATAGAAACTTTTGGC 212321
Query 23859 TTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATC 23918
||||| | |||||| || |||| | | | |||||||||| ||||||| ||||||
Sbjct 212322 TTCAGGAATTTGAACCTCTGCTGAAAAGTTCTCAACTAAATTTTCATTAACAAGACCATC 212381
Query 23919 ACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA--TCAGTTGATAAT 23976
| || ||||| ||||| | || | ||||| ||| ||| | ||| | | |
Sbjct 212382 AGATGCTGCAAAAAAAGCCAATACTCTTGAGATAAAGAATCTCTCATTTTCGTTTA-ACT 212440
Query 23977 T--TTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTG 24034
| | | ||| ||| ||||| || | | ||||| ||| || ||||| || |
Sbjct 212441 TAGTGTCCCAGTCAGGTATATCCTTAGCAAGATCAATTTCCTCTGTAGTCCAGAAGGAAG 212500
Query 24035 CCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAATC 24094
|| | ||| |||||| ||||||| ||| || || |||||||| || || ||||
Sbjct 212501 CCTCGTGCTTCTTGTACATTTGCCAAATTTCACCATATTTAATTGGAAACATAACAAATC 212560
Query 24095 T 24095
|
Sbjct 212561 T 212561
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521487113470400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |