Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq14 360 2e-94 >seq14 Length=670130 Score = 360 bits (398), Expect = 2e-94 Identities = 608/872 (70%), Gaps = 19/872 (2%) Strand=Plus/Minus Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTT-TCGAAAAAATTTGTCTTACCCT 23263 ||||||||| ||||||||| || ||| | |||| |||||||| ||||||||||| Sbjct 578609 CATAACACCGGCTTTTTGATAATCAGAAACTC-TCTTCTCGAAAAAGTTTGTCTTACCAG 578551 Query 23264 CTAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATA-CAGCT--TTAC 23320 ||||||| ||||| ||||| || ||||||||||||| | ||| || | | || |||| Sbjct 578550 CTAATGAAATATTCTCCATGAAGTCAAATGGATTAGTAACATTGTAAATCTTCTTGTTAC 578491 Query 23321 ATGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCAT 23380 || | |||||| | ||| || ||| |||||| ||||||||||||||||| Sbjct 578490 ---CTAGAGCAACTAAAAGACGATCGGCAACATATTCAACATATTGACACATCAAATTGC 578434 Query 23381 AGTTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAA 23440 | || ||||| | || | |||||| ||||| ||| || || ||||| | | Sbjct 578433 AATTCATACCAAGTAATGAGGCTGGAAGAGCATCTGTAAAGTATTCCTTCTCAATAGTTA 578374 Query 23441 CAGCATCTTTAATTA---TTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACT 23497 |||| ||| |||||| ||| |||||||| | || ||| || || |||| Sbjct 578373 CAGCCTCTGTAATTATCTTTTCAACAATAATTGGATC---GGGTCTATTTTCCAAATGGG 578317 Query 23498 TAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAG 23557 ||| ||||| || ||||||||| || || |||||||| | || ||||||||||||| Sbjct 578316 AAAATAATAAGCAAGCAAAATCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTAG 578257 Query 23558 AAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATC 23617 |||| || | ||||||||||| |||| ||||| | ||| || || | || || || | Sbjct 578256 AAAAAGTAAGGCCTGGCATTAAACCTCTCTTTTTTAACCAGAAAATAGATGCGAAAGAAC 578197 Query 23618 CGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCAT 23677 | || || |||||||| |||||||| || || || ||||||||| | ||||| ||| | Sbjct 578196 CAGAGAAAAAAATACCTTCAACAGCAGCGAAAGCAACAAGACGTTCAGCAAATAATGCTT 578137 Query 23678 TATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTT 23737 | |||| ||||||| || | ||||| |||||| || | ||| || ||| Sbjct 578136 CCTTATCACTAATCCATCTTAAAGCCCAATCTGCCTTCTTCTTAATACAAGGAACATTTT 578077 Query 23738 CAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTA 23797 |||| || || || | ||| |||| | |||| | |||||||| ||||||| || Sbjct 578076 CAATAGCATTGAATAAAAATTCACGCTCTTTAGAATCTTTAATATATGTGTCAATTAATA 578017 Query 23798 AACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAG 23857 ||| | ||||| || |||||||| || || || || |||||||| || ||| Sbjct 578016 GTGAATATGTCTCAGAGTGTATATTTTCCATCATGATTTGGAAACCATAAAAGCACTTAG 577957 Query 23858 CTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCAT 23917 |||| | |||||| ||| |||| ||| | |||||||||||||||||||||||| Sbjct 577956 CTTCTGGTGTTTGAACCTCAGCCGAAAAGTTTTCAACTAAATTTTCGTTAACAATACCAT 577897 Query 23918 CACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAA-- 23975 | |||||| || || || | || | |||||| | ||||| || ||| Sbjct 577896 CTGAAGCAGCGAAAAAGGCTAAGACGCGTGAAATAAAAAAACGCTCATC-TTTATTAAGC 577838 Query 23976 --TTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTT 24033 |||| ||||||| ||||||||| |||||||| ||| ||| | ||||| ||| | Sbjct 577837 TTATTTTCCCAATCACCAATATCTTTACTTAAATCAATTTCTTCAGCAGTCCAGAAAGAT 577778 Query 24034 GCCAAGGCACGCTTATACATTAGCCAAATATC 24065 || || ||||||||| |||| || || Sbjct 577777 GCTTCAGCCTTTTTATACATTTGCCAGATCTC 577746 Score = 306 bits (338), Expect = 4e-78 Identities = 613/901 (68%), Gaps = 17/901 (2%) Strand=Plus/Plus Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264 ||||||||| | |||||||| || ||| | |||| || ||||| |||||||| | Sbjct 211668 CATAACACCTGTCTTTTGATAATCTGAAACTCTCTTTTCAAAGAAATTAGTCTTACCAAC 211727 Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGA 23324 | || |||||||||||||| || || ||||| | || || ||| || |||| | Sbjct 211728 AAGAGAAATATTTTCCATAAAGTCGAAAGGATTTGTAGCATCATAAACCTTTTTATTTCC 211787 Query 23325 TAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTT 23384 || | | | ||||| || ||| ||||||| |||||||||||||| || | || Sbjct 211788 CAAAGCAACGAGCAATCTATCAGCAACATATTCAATGTATTGACACATCAAGTCGCAATT 211847 Query 23385 TATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGC 23444 ||||| | || | || |||| || || ||| || ||||||||| |||||| Sbjct 211848 CATACCAAGTAATGAGACAGGAAGAGCCTCGGTAAAGTATTCTTTTTCAATCACAACAGC 211907 Query 23445 ATCTTT---AATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAA 23501 || | |||| | | |||||| || ||| ||| || || || | || Sbjct 211908 TTCAGTGACAATTTTCTCGACAATAGCTGGATCA---GGTTTATTTTGCAAGTGAGCGAA 211964 Query 23502 CAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAA 23561 ||||||||| ||||||| |||||| |||||||| | || || | |||||||||||| Sbjct 211965 TAATAAACATCCAAAATCTGTATGTAGACCTTCATCTCGACAGATAAGTTCATTAGAAAA 212024 Query 23562 TGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGA 23621 ||||| || |||||||| |||| ||||| | ||||||||| |||||||||||||| || Sbjct 212025 GGTTAAACCAGGCATTAAACCTCTCTTTTTCAACCAAAATATGGCAGCAAATGATCCAGA 212084 Query 23622 AAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATA 23681 || || | ||| |||| || ||||| || || | ||| |||||| ||| | || Sbjct 212085 GAAAAATACACCTTCAATAGTTGCAAAAGCAACTAATCGTTCCCCAAATAATGCTTCATC 212144 Query 23682 ATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAAT 23741 || ||||||||| ||||| | ||||||| ||| | ||| || | |||| Sbjct 212145 GTCGTTAATCCATTTCAAAGTCCAGTCAGCCTTCTGTTTGATACATGGGATGTTGACAAT 212204 Query 23742 TGCTTTTAAGAGAAAAGTTTTTTCTTCATTA---TCTGTTATATATGTATCAATTAGTAA 23798 ||| |||||| ||||| ||| |||| || ||| | || || ||||| | ||| Sbjct 212205 TGC-ATTAAGAAGAAAGTCTTT--TTCAATAGGGTCTCTAATGTAAGTATCTAACTGTAC 212261 Query 23799 ACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGC 23858 | || |||||||||| |||||||| | ||||| |||||||| |||| | | || Sbjct 212262 AGAGTAAGTTTCAGAATGTATATTTTCTGTCATGATCTGGAACCCATAGAAACTTTTGGC 212321 Query 23859 TTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATC 23918 ||||| | |||||| || |||| | | | |||||||||| ||||||| |||||| Sbjct 212322 TTCAGGAATTTGAACCTCTGCTGAAAAGTTCTCAACTAAATTTTCATTAACAAGACCATC 212381 Query 23919 ACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA--TCAGTTGATAAT 23976 | || ||||| ||||| | || | ||||| ||| ||| | ||| | | | Sbjct 212382 AGATGCTGCAAAAAAAGCCAATACTCTTGAGATAAAGAATCTCTCATTTTCGTTTA-ACT 212440 Query 23977 T--TTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTG 24034 | | | ||| ||| ||||| || | | ||||| ||| || ||||| || | Sbjct 212441 TAGTGTCCCAGTCAGGTATATCCTTAGCAAGATCAATTTCCTCTGTAGTCCAGAAGGAAG 212500 Query 24035 CCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAATC 24094 || | ||| |||||| ||||||| ||| || || |||||||| || || |||| Sbjct 212501 CCTCGTGCTTCTTGTACATTTGCCAAATTTCACCATATTTAATTGGAAACATAACAAATC 212560 Query 24095 T 24095 | Sbjct 212561 T 212561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487113470400