Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq5 96.9 2e-15 seq21 89.7 4e-13 seq8 89.7 4e-13 seq12 84.2 2e-11 >seq5 Length=1301127 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||| | |||||| |||| || | || |||||||||||||||||||| | Sbjct 1173646 CCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAATCAGAT 1173705 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 | || | || || | ||||| || |||||||| ||||| || || |||| ||| Sbjct 1173706 AAAGTACGTCCATCTTCTAATTGCTTACCAGCAAAGATTAAACGTTGTTGGTCTGGAGGG 1173765 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCA 44288 | |||||||| ||| ||||| ||| || ||| | || || |||| || || | Sbjct 1173766 ATTCCTTCCTTGTCCTGGATCTTTGACTTAACATTGT--CAATAGTATCGGATGACTCTA 1173823 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| | ||||| ||||| || || ||||| || || || || ||||| Sbjct 1173824 CCTCGAGGGTAATAGTCTTACCGGTAAGGGTTTTGACAAAAATCTGCAT 1173872 >seq21 Length=453462 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || ||||| | ||| || |||| ||| | || ||||||||||||||||||||| Sbjct 371753 ATACCACCTCTTAATCTTAAAACCAAGTGTAAGGTAGACTCCTTTTGGATGTTGTAATCA 371694 Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 | | || | || || || || || || ||||| || ||||| || ||||||| Sbjct 371693 GATAAAGTACGACCATCTTCTAGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGG 371634 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTC 44286 || | |||||||| || ||||| || || || || | || || || |||||| Sbjct 371633 GGAATTCCTTCCTTGTCTTGGATCTT-TGATTTAACATTATCGATTGTATCACTGGATTC 371575 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | || || || || ||||| || ||||| || || || ||||| Sbjct 371574 GACCTCAAGAGTGATGGTTTTACCCGTTAGCGTCTTGACAAAAATCTGCAT 371524 >seq8 Length=1087023 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || ||||| | |||||| |||| || | ||| |||||||| |||||||| || Sbjct 676683 ATACCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCA 676742 Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 | | || |||| || | || || ||||||||||| || | || || |||| | Sbjct 676743 GATAAGGTACGTCCGTCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGA 676802 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATT 44285 || | |||||||| || || || ||| || ||| | || ||||| | ||||| Sbjct 676803 GGAATTCCTTCCTTGTCTTGAATTTTTGACTTAACATTGT--CAATAGTGTCAGAGGATT 676860 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||| | ||||| || || || || | ||| || |||||||| ||||| Sbjct 676861 CAACCTCGAGAGTAATGGTTTTACCGGTCAAGGTTTTGACGAAGATCTGCAT 676912 >seq12 Length=712717 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||| ||| | |||| || | || ||||||||||||||||| || | Sbjct 150925 CCACCTCTCAATCTGAGAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAGTCAGAT 150984 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 | || | || |||| ||||| || ||||| |||||||| || ||||||| ||| Sbjct 150985 AAGGTACGGCCATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGA 151044 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCAC 44289 | || ||||| || ||||| || || | || | || ||||| | || || || Sbjct 151045 ATTCCCTCCTTATCTTGAATCTT-TGATTTGACATTATCAATAGTGTCAGATGACTCAAC 151103 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| | ||||| ||||| || || ||||| || || || || ||||| Sbjct 151104 CTCAAGAGTAATTGTCTTCCCTGTAAGGGTTTTAACAAAAATCTGCAT 151151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989803315912