Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq4 122 1e-22
>seq4
Length=1434447
Score = 122 bits (134), Expect = 1e-22
Identities = 375/583 (64%), Gaps = 14/583 (2%)
Strand=Plus/Plus
Query 155873 TAAAATTTGAAGACGCCCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAACCG 155932
||||||||||| ||| || | |||||| ||||| |||||| || | || ||| || ||
Sbjct 525436 TAAAATTTGAAAACGTCCATGTTCATCAGGTAAAGAAATTTCAATTTGCATTTCAAAACG 525495
Query 155933 CCCAGGTCTTAATAATGCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATTAA 155992
||||| | |||||| || || |||||||| || || || |||||||| || | |||
Sbjct 525496 ACCAGGACGTAATAAGGCATCATCAATTAAATCTCTTCGATTTGTCATACCAATAACTAA 525555
Query 155993 AATGTTGTTTAAAGATTCTACACCGTCTATTTTAGACAATAATTGATTGACTAC------ 156046
||| || ||||| || ||||| || ||||| | |||||||||||||| ||
Sbjct 525556 AATATTATTTAATTGATCAACACCATCCATTTTTGCTAATAATTGATTGACAACATTATC 525615
Query 156047 -----GGCGTCGTGCGTGGCGT-TATCACCGCGTTTTTTACACAGAGCATCTATTTCATC 156100
| | | | | | | || ||| | || |||| | | | ||||| ||||||
Sbjct 525616 TCCAACACCTGTTCCATCACCTCTACTACCCCTTTGTTTAAAAACTGAATCTAATTCATC 525675
Query 156101 GAAGACGATAACGTGTAATCCGCTGGCTAAACCCAATTTNNNNNNNNNNNNNNNAGCCTC 156160
|| | |||| |||||| || || ||| | ||| ||
Sbjct 525676 AAATATAATAATGTGTAAACCAGATTCTTCACCTTTTGCTTTATATTCAGCTTCAGCATC 525735
Query 156161 TTGAAACAATCGTCTGACGTTAGCTTCCGATTCACCCACATATTTGTTTAATAATTCAGG 156220
|| ||| || ||| | || |||| || ||| |||||||| ||| | ||||||
Sbjct 525736 TTTAAATAAATTTCTAATATTTTCTTCTGAAGAACCAACATATTTCGATAAAATTTCAGG 525795
Query 156221 ACCGTTAACTATTTTGACGGGTCGTG-ATTTAAAAGCTTGAGCGATACAGCGAGCCATTA 156279
||| || || ||||| || | |||||| | || | | || | || ||||
Sbjct 525796 ACCATTTACAATTTTTGGCTCTCTAGCATTTAACA-TTTTACCAATTTGTCTTGCAATTA 525854
Query 156280 ATGTTTTACCGCACCCAGGAGGTCCGTATAACAATACTCCTTTTATATGTTTACAACCTA 156339
|||| ||||| || || || || | || || | ||||| | ||| | | || |
Sbjct 525855 ATGTCTTACCTGTTCCTGGGGGACCATGCAATAAAATACCTTTAACATGATGAACTCCCA 525914
Query 156340 ATTTTTCAGTTATTTCTACCGGAACTGATCTGGAAGCAAATGCTCTTCGAAAAATGAGAG 156399
|||||||| | || || || | | ||| ||||| ||||||| ||||||| |
Sbjct 525915 ATTTTTCAATAATACCTGGTGGGAAAGTTCTACTTGCAAAAGCTCTTCTAAAAATGGCAC 525974
Query 156400 AAAATTCTTTATCCAATCCCCCCACACCCATTTCCTCAAAATT 156442
|||||||| ||| || || || | |||||| || ||||| ||
Sbjct 525975 TAAATTCTTCATCTAAACCACCAATACCCATATCTTCAAATTT 526017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 667074065972160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |