Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq4 122 1e-22 >seq4 Length=1434447 Score = 122 bits (134), Expect = 1e-22 Identities = 375/583 (64%), Gaps = 14/583 (2%) Strand=Plus/Plus Query 155873 TAAAATTTGAAGACGCCCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAACCG 155932 ||||||||||| ||| || | |||||| ||||| |||||| || | || ||| || || Sbjct 525436 TAAAATTTGAAAACGTCCATGTTCATCAGGTAAAGAAATTTCAATTTGCATTTCAAAACG 525495 Query 155933 CCCAGGTCTTAATAATGCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATTAA 155992 ||||| | |||||| || || |||||||| || || || |||||||| || | ||| Sbjct 525496 ACCAGGACGTAATAAGGCATCATCAATTAAATCTCTTCGATTTGTCATACCAATAACTAA 525555 Query 155993 AATGTTGTTTAAAGATTCTACACCGTCTATTTTAGACAATAATTGATTGACTAC------ 156046 ||| || ||||| || ||||| || ||||| | |||||||||||||| || Sbjct 525556 AATATTATTTAATTGATCAACACCATCCATTTTTGCTAATAATTGATTGACAACATTATC 525615 Query 156047 -----GGCGTCGTGCGTGGCGT-TATCACCGCGTTTTTTACACAGAGCATCTATTTCATC 156100 | | | | | | | || ||| | || |||| | | | ||||| |||||| Sbjct 525616 TCCAACACCTGTTCCATCACCTCTACTACCCCTTTGTTTAAAAACTGAATCTAATTCATC 525675 Query 156101 GAAGACGATAACGTGTAATCCGCTGGCTAAACCCAATTTNNNNNNNNNNNNNNNAGCCTC 156160 || | |||| |||||| || || ||| | ||| || Sbjct 525676 AAATATAATAATGTGTAAACCAGATTCTTCACCTTTTGCTTTATATTCAGCTTCAGCATC 525735 Query 156161 TTGAAACAATCGTCTGACGTTAGCTTCCGATTCACCCACATATTTGTTTAATAATTCAGG 156220 || ||| || ||| | || |||| || ||| |||||||| ||| | |||||| Sbjct 525736 TTTAAATAAATTTCTAATATTTTCTTCTGAAGAACCAACATATTTCGATAAAATTTCAGG 525795 Query 156221 ACCGTTAACTATTTTGACGGGTCGTG-ATTTAAAAGCTTGAGCGATACAGCGAGCCATTA 156279 ||| || || ||||| || | |||||| | || | | || | || |||| Sbjct 525796 ACCATTTACAATTTTTGGCTCTCTAGCATTTAACA-TTTTACCAATTTGTCTTGCAATTA 525854 Query 156280 ATGTTTTACCGCACCCAGGAGGTCCGTATAACAATACTCCTTTTATATGTTTACAACCTA 156339 |||| ||||| || || || || | || || | ||||| | ||| | | || | Sbjct 525855 ATGTCTTACCTGTTCCTGGGGGACCATGCAATAAAATACCTTTAACATGATGAACTCCCA 525914 Query 156340 ATTTTTCAGTTATTTCTACCGGAACTGATCTGGAAGCAAATGCTCTTCGAAAAATGAGAG 156399 |||||||| | || || || | | ||| ||||| ||||||| ||||||| | Sbjct 525915 ATTTTTCAATAATACCTGGTGGGAAAGTTCTACTTGCAAAAGCTCTTCTAAAAATGGCAC 525974 Query 156400 AAAATTCTTTATCCAATCCCCCCACACCCATTTCCTCAAAATT 156442 |||||||| ||| || || || | |||||| || ||||| || Sbjct 525975 TAAATTCTTCATCTAAACCACCAATACCCATATCTTCAAATTT 526017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667074065972160