Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq3 232 7e-56 >seq3 Length=1585198 Score = 232 bits (256), Expect = 7e-56 Identities = 592/892 (66%), Gaps = 27/892 (3%) Strand=Plus/Minus Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971 |||||||||| ||| | ||||||||||||||||| || || | || || || || | Sbjct 913946 TTTGGTAATCGGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCAGCCAAGGAGATGTTCT 913887 Query 15972 CCATAAAATCAAAGGGATTAGTAGC--TGAAAATAT-CTTAGAGTACCCCAGTTCCGTAA 16028 |||| || || || || || ||| | || |||| | |||| | || || | | Sbjct 913886 CCATGAAGTCGAATGGGTTGGTAACATTGTAAATCTTCTTACAA---CCGAGGGCAACTA 913830 Query 16029 CTAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTA-TA 16087 ||||||||| || || ||||| | |||||||||||||| || || || || |||| || Sbjct 913829 ATAATCTATCAGCGACGAATTCAACGTATTGACACATTAAATCACAGTTCATACCTAATA 913770 Query 16088 AGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATG 16147 | | | || || | || | || || || | ||| || |||| ||||| | ||| Sbjct 913769 ACTTG-ACTGGCAAGGCATCGGTGAAGTATCTCTTTTCAATGTCAACAGCTTCGGTGATG 913711 Query 16148 ATATCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCG 16207 || | | | ||||| || || | || | ||| |||| |||||| || Sbjct 913710 ATCTTAGCAACAATGCTTTCATCTGGAGTGTTATTCAAGTGAGAGAACAATAGACAAGCA 913651 Query 16208 AAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGC 16267 ||||| |||| ||||| ||||| | ||| | |||||| || |||||||| |||||| Sbjct 913650 AAGTCAGTGTGTAAACCTTCATCTCTACAGATGAATTCGTTAGAGAAAGTTAAACCTGGC 913591 Query 16268 ATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCC 16327 ||| |||| ||||| |||||||| || | |||||| || || || ||||| |||||| Sbjct 913590 ATTAAACCTCTCTTCTTCAACCAGAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCC 913531 Query 16328 TCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCAT 16387 ||||| | || || || | |||| ||| || | || || | || |||||| Sbjct 913530 TCAACGGCAGCGAAGGCAACCAATCTTTCACCGAATAAGGCTTCATCATCGGAGATCCAT 913471 Query 16388 TTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAAT 16447 | ||||||| || |||| | | ||||| || ||| ||||| || || || Sbjct 913470 CTTAAGGCCCATTCAGCCTTTTCTCTAATACATGGGATGTGTTCAATGGCGTTGAATAAG 913411 Query 16448 TTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAG 16507 | || ||||| ||| | | || || || |||| ||| ||| | || ||| Sbjct 913410 TAATCAGCTTCCTTTGGATCCTTAACGTAAGTGTCGATCAATAAGGAGTAAGTCTCAGAG 913351 Query 16508 TGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACT 16567 |||||||| || || || || || || ||||| ||| || || | ||||| ||| Sbjct 913350 TGTATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCTGGGATTTGCACT 913291 Query 16568 TCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAAC 16627 || | | || ||| ||| || ||||| || ||||| ||| |||||| || || Sbjct 913290 TCAGCAGAGAAGTTTTCAACCAAATTTTCATTGACAATACCATCAGATGCAGCGAAGAAG 913231 Query 16628 GCCAATATGTGCT-TA---ATGAAATATTTTTCGTCAGATGTAA--GAATATG-----CC 16676 || || | || || ||||| ||| |||||| ||| | ||| || || Sbjct 913230 GCTAACA----CTCTAGAGATGAAGTATCTTTCGT----TGTCATTCAATCTGTTGTTCC 913179 Query 16677 AATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCT 16736 | || | ||| || ||||||| ||| | |||||| | ||||| ||| ||| | |||| Sbjct 913178 AGTCGTGTAAGTCCTTGGATAAATCAATTTCTTCGGCAGTCCAGAAGGAAGCTTCGGCCT 913119 Query 16737 TTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGACGTATCT 16788 | || ||||||| ||| || || | |||| || || |||| |||| |||| Sbjct 913118 TCTTGTACATTTGCCAGATCTCGTGATATTTGATTGGGAATAAGACGAATCT 913067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414252968360